| Gene: F11r | ID: uc007doo.1_intron_2_0_chr1_173390777_f | SPECIES: mm9 |
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(2) OTHER.mut |
(10) TESTES |
| CGTCCAAGGCAGCACAACTGCACTTGTGTGTTATAACAGCCAGATCACAGGTAAGTTGTCGAAGTCACTAAGAACAGCCGAGTAATCGACACTGCCCAGCCTGGATTCCAGAGGTGGGGACACACCCTGGAGCTCTGAGTACCTCCCTTCAGTGGAGGATGAAGAATGTGTCTTTCGGGCCTTGCTCCCCAGTTGACCCTGTCTCTTCAACCTCTGCTCCCATCTCCTGGTAGCTCCCTATGCGGACCGAGTCACCTTCTCATCCAGTGGCATCACGTTCAGT ...........................................................................................................................................((((.......((..((((.((((((....(((....(((........)))....)))......)))))).))))..))..........))))................................................... .....................................................................................................................................134................................................................................................233................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) |
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| ..................................................GTAAGTTGTCGAAGTCACTAAGAACAGCCGAGTAATCGACACTGCCCAGCCT..................................................................................................................................................................................... | 52 | 1 | 52.00 | 52.00 | 52.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTTGTCGAAGTCACTAAGAACAGC............................................................................................................................................................................................................. | 28 | 1 | 13.00 | 13.00 | - | 8.00 | 4.00 | - | - | - | - | 1.00 | - | - |
| ..................................................GTAAGTTGTCGAAGTCACTAAGAACAG.............................................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................................................CGGACCGAGTCACCTTCTCATCCAGTGGCATa......... | 32 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................ACCCTGGAGCTCTGAGga.............................................................................................................................................. | 18 | ga | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTAAGTTGTCGAAGTCACTAAGAAaagc............................................................................................................................................................................................................. | 28 | aagc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................TGTGTGTTATAACAGCCAGAT.............................................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................................................................................CGGACCGAGTCACCTTCTCATCCAGTGGC............ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTAAGTTGTCGAAGTCACTAAGAACA............................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................GTAAGTTGTCGAAGTCACTAAGAACAGCCGAGTAATCGAC................................................................................................................................................................................................. | 40 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| CGTCCAAGGCAGCACAACTGCACTTGTGTGTTATAACAGCCAGATCACAGGTAAGTTGTCGAAGTCACTAAGAACAGCCGAGTAATCGACACTGCCCAGCCTGGATTCCAGAGGTGGGGACACACCCTGGAGCTCTGAGTACCTCCCTTCAGTGGAGGATGAAGAATGTGTCTTTCGGGCCTTGCTCCCCAGTTGACCCTGTCTCTTCAACCTCTGCTCCCATCTCCTGGTAGCTCCCTATGCGGACCGAGTCACCTTCTCATCCAGTGGCATCACGTTCAGT ...........................................................................................................................................((((.......((..((((.((((((....(((....(((........)))....)))......)))))).))))..))..........))))................................................... .....................................................................................................................................134................................................................................................233................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) |
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