| Gene: Nit1 | ID: uc007dob.1_intron_5_0_chr1_173275132_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| GGAAGTTGAGGTATTAAGGCACCGATCATAGTCGCCTCTCCCATTTTCCCATTTTATATCTTTTCCTAGCTACTAGTAGTAAAAAGTATTTTCGAAGCCTTGGGGGAGGGGATTACTGGCCAGGCCTGGAAATGGCAGAGAATTCTAGAAACTTACGGCTTGAAAGAGGGTTAGGTGTCCTGATTTCTCACCTTCTTCAGGCTGGGCTTCATCACCAGGCCTCCTCACCAACTCCTGTGTACCGGATACC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................TGGCAGAGAATTCTAGAAACTTACGGCT.......................................................................................... | 28 | 1 | 8.00 | 8.00 | - | 1.00 | 2.00 | - | - | 2.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................TGGCAGAGAATTCTAGAAACTTACGGCTT......................................................................................... | 29 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 |
| .................................................................................................................TACTGGCCAGGCCTGGAAATGGCAGAGA............................................................................................................. | 28 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................GCTTGAAAGAGGGTTAGGTGTCCTGATTTCT.............................................................. | 31 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................CTGGAAATGGCAGAGttgt.......................................................................................................... | 19 | ttgt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TAGAAACTTACGGCTTGAAAGAGGGg............................................................................... | 26 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................TAGAAACTTACGGCTTGAAAGAGGc................................................................................ | 25 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................TTCTAGAAACTTACGGCTTGAAAGAGG................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TTCTAGAAACTTACGGCTTGAAAGA................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TTTTCGAAGCCTTGGGGGAGGGGAT......................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGAAGTTGAGGTATTAAGGCACCGATCATAGTCGCCTCTCCCATTTTCCCATTTTATATCTTTTCCTAGCTACTAGTAGTAAAAAGTATTTTCGAAGCCTTGGGGGAGGGGATTACTGGCCAGGCCTGGAAATGGCAGAGAATTCTAGAAACTTACGGCTTGAAAGAGGGTTAGGTGTCCTGATTTCTCACCTTCTTCAGGCTGGGCTTCATCACCAGGCCTCCTCACCAACTCCTGTGTACCGGATACC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................GGCTTCATCACCAGGCCT............................ | 18 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TCTCACCTTCTTCAGGCTGGGCTTCATCA.................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................................................CGGCTTGAAAGAGGGTct............................................................................... | 18 | ct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |