(7)
OTHER.mut
(2)
OVARY
(5)
PIWI.ip
(3)
PIWI.mut
(29)
TESTES

Sense strand
ACTTCCGGGACGGTGTTCCGGCCCATTCCGGCCCATTTCCACCCCCGGAGGTAGGTGCTGCTCCTTGACTGGGCTCGTTCCCCGCACCCCCGCCCCGTTAGCTCATACCCGACGCTCCCGGGCCGCGTCTGGGTTGCAGCCAGCTCCTGCGGCGCTCAGTCGCTGCCCCACCTCCCCTCCCAGCACTCGGCGACCTTCCGCCCCTTTGGCTCCGGGCTGTCGAGCTCGCGGGCCCGCCCCCTTGGCGAGCCCCTCCCTCAGGACCCCGCGCGCGCGCCGGGGCCACACCCAGACACACCCCCGCCCCGGCAACCTCCGCCGCCCTAGACCGATCCCGGGGCGCCGCCCCCTTCCCGGTCCCGCGCCTCACCTGTGCGCCCGCAACTCCCTTGCCGCGGGGCTCTGCTCCTGTCGAGCTTCCCGGCATCTGTGCCACCTCCTCGCTTAGCCAGGTCCCCCTTTTCCCATGCTTCTTGACACTGATAGAGGCCTCCCCAGTACCCGACTGGCCAACCCCAGCGTTCCCGATTCTCCCTTTTACAGCTCTCGCCCCTTCAGTGCCGACGCTAGAGAAAGACTTTACTCCAGGGGCT


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
........................................ACCCCCGGAGGTAGGTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 9.00 9.00 7.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACACTGATAGAGGCCTCCCCAGTAC............................................................................................ 27 1 5.00 5.00 - - 2.00 - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACACTGATAGAGGCCTCCCCAGTA............................................................................................. 26 1 3.00 3.00 - - - 2.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCCGACGCTAGAGAAAGACT.............. 26 1 3.00 3.00 - 1.00 - - - - - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAAAGACTTTACTCCAGGGGCT 26 1 2.00 2.00 - - - - - - - - - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCCGACGCTAGAGAAAGACTTT............ 28 1 2.00 2.00 - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCCGACGCTAGAGAAAGACTT............. 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................TGGGTTGCAGCCAGCTCCTGCGGCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 2.00 2.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTGTCGAGCTTCCCGGCATCTG................................................................................................................................................................... 27 1 2.00 2.00 - - - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCATGCTTCTTGACACTGATAGAGGC....................................................................................................... 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCCGACGCTAGAGAAAGACTgt............ 26 gt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCCGACGCTAGAGAAAGACTT............. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
........................................ACCCCCGGAGGTAGGTGCTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....CGGGACGGTGTTCCGGCCCATTCCGGCCCATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 32 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACACTGATAGAGGCCTCCCCAGT.............................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGTTCCCGATTCTCCCTTTTACA................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCCCATGCTTCctc..................................................................................................................... 18 ctc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCTTGACACTGATAGA.......................................................................................................... 19 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCCGACGCTAGAGAAAGACTTTA........... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAAAGACTTTACTCCAGGGGCa 26 a 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................CCGATCCCGGGGCGCtatt...................................................................................................................................................................................................................................................... 19 tatt 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCATGCTTCTTGACACTGATAGA.......................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAAAGACTTTACTCCAGGG... 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...................................................................................................................................................................................CCAGCACTCGGCGACCTTCCGCCCC..................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCTCGCCCCTTCAGTGCCGAC............................ 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTGTCGAGCTTCCCGGCATCTGa.................................................................................................................................................................. 28 a 1.00 2.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGCTTCCCGGCATCTG................................................................................................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGGCATCTtacc................................................................................................................................................................ 16 tacc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAGCTCTCGCCCCTTCAGTGCC............................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGCTTCTTGACACTGATAGAGGCCTC.................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGAGCTTCCCGGCATCTGTGCCAC............................................................................................................................................................. 30 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGAGCTTCCCGGCATCTGTG................................................................................................................................................................. 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAGCTCTCGtctc........................................ 18 tctc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00

Antisense strand
ACTTCCGGGACGGTGTTCCGGCCCATTCCGGCCCATTTCCACCCCCGGAGGTAGGTGCTGCTCCTTGACTGGGCTCGTTCCCCGCACCCCCGCCCCGTTAGCTCATACCCGACGCTCCCGGGCCGCGTCTGGGTTGCAGCCAGCTCCTGCGGCGCTCAGTCGCTGCCCCACCTCCCCTCCCAGCACTCGGCGACCTTCCGCCCCTTTGGCTCCGGGCTGTCGAGCTCGCGGGCCCGCCCCCTTGGCGAGCCCCTCCCTCAGGACCCCGCGCGCGCGCCGGGGCCACACCCAGACACACCCCCGCCCCGGCAACCTCCGCCGCCCTAGACCGATCCCGGGGCGCCGCCCCCTTCCCGGTCCCGCGCCTCACCTGTGCGCCCGCAACTCCCTTGCCGCGGGGCTCTGCTCCTGTCGAGCTTCCCGGCATCTGTGCCACCTCCTCGCTTAGCCAGGTCCCCCTTTTCCCATGCTTCTTGACACTGATAGAGGCCTCCCCAGTACCCGACTGGCCAACCCCAGCGTTCCCGATTCTCCCTTTTACAGCTCTCGCCCCTTCAGTGCCGACGCTAGAGAAAGACTTTACTCCAGGGGCT


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGTTCCCGATTCTC............................................................ 17 1 2.00 2.00 - - - - - - - - - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCTGTGCCACCTCCTCGCTTAt.................................................................................................................................................. 27 t 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................GACCTTCCGCCCCTTaa................................................................................................................................................................................................................................................................................................................................................................................................... 17 aa 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCAGTGCCGACGCT......................... 17 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................CCAGCTCCTGCGGCGCTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGTGCCACCTCCTCGCTTAGCCA.............................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCGCCCCTTCAGTGCCGACGCTA........................ 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................CCGGTCCCGCGCCTcatg.................................................................................................................................................................................................................................. 18 catg 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................CCCACCTCCCCTCCCAGCACTC..................................................................................................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.....................CCCATTCCGGCCCATTTCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAGCCAGGTCCCCCTTTTCCCA.............................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................GCAGCCAGCTCCTGCGGCGCTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 24 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGACGCTAGAGAAAGACTTTACTCCA...... 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................TGCCCCACCTCCCCTCCCAGa.......................................................................................................................................................................................................................................................................................................................................................................................................................... 21 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGCCCCTTCAGTGCCGACGCT......................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -