(2)
OTHER.mut
(1)
OVARY
(2)
PIWI.ip
(4)
PIWI.mut
(21)
TESTES

Sense strand
GCCCTGATTGGCTGAAGCTGCGTGCCTGGTGAGATGATATGGCGTACTGTGAGTGGTTGGGGGCTGAGAGTATATAAGCAGACCTCCCTGGGTGCCCGGGGTGTGTTGAGGCAATGCTCCCCGTAGCAGCATTGAGGCATTCCTGCAATAAAGGCTGTTGAGAAGAACCCGACCGTGTTGTGTCTTCCTTGCTGGCCAAGGTGGGCGCAACATCTGGTGGCCTGTACAGGGCCCAAGGACAACGACCTTG


Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
............................................................................................................................................TCCTGCAATAAAGGCTGTTGAGt....................................................................................... 23 t 9.00 0.00 - - - 9.00 - - - - - - - - - - - - - - - - - -
...............................................................................................................................................TGCAATAAAGGCTGTTGAGAAGAACC................................................................................. 26 3 3.67 3.67 - - 0.67 - 0.33 - - 1.00 - - - - 1.67 - - - - - - - - -
..............................................................................................................................................................TGAGAAGAACCCGACCGTGTTGTGTCTT................................................................ 28 1 3.00 3.00 - 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - -
..............................................................................................................................................................TGAGAAGAACCCGACCGTGTTGTGTCTTC............................................................... 29 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCCTaga............................................................................................................................................................................................................................ 26 aga 3.00 0.00 - 1.00 - - - - - - - - - 2.00 - - - - - - - - - -
..............................................................................................................................................................TGAGAAGAACCCGACCGTGTTGTGTCT................................................................. 27 1 2.00 2.00 - - 1.00 - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................................TAAAGGCTGTTGAGAAGAACCCGACCGTa......................................................................... 29 a 2.00 1.00 2.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................TAAAGGCTGTTGAGAAGAACCCGACC............................................................................ 26 1 2.00 2.00 - - - - - - - 1.00 - 1.00 - - - - - - - - - - - -
........................................................................................................................................................................................TTCCTTGCTGGCCAAGGTGGGCGCAAC....................................... 27 3 1.33 1.33 0.33 - 0.33 - - - - - 0.67 - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCCTGGa............................................................................................................................................................................................................................ 26 a 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
..CCTGATTGGCTGAAGCTaaa.................................................................................................................................................................................................................................... 20 aaa 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
..............AAGCTGCGTGCCTGGTGAaa........................................................................................................................................................................................................................ 20 aa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - -
.......TTGGCTGAAGCTGCGTGCCTGGTGAGgtta..................................................................................................................................................................................................................... 30 gtta 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCCTcgtg........................................................................................................................................................................................................................... 27 cgtg 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................TGAGAGTATATAAGCAGACCTCCCTGGGa............................................................................................................................................................. 29 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................TAAAGGCTGTTGAGAAGAACCCGACCGT.......................................................................... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCCTGGTGc.......................................................................................................................................................................................................................... 28 c 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
..................................TGATATGGCGTACTGTGAGTGGTT................................................................................................................................................................................................ 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - -
................................GATGATATGGCGTACTGTGAGTGGT................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................................AGAGTATATAAGCAGACCTCCCTGtgtt............................................................................................................................................................ 28 tgtt 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCCTGGTt........................................................................................................................................................................................................................... 27 t 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................AGAAGAACCCGACCGTGTTGTGTCTT................................................................ 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
.........GGCTGAAGCTGCGTGCCTGGTGAGgag...................................................................................................................................................................................................................... 27 gag 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................TGCTGGCCAAGGTGGGCGCAACATCT................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - -
.........................................................................................................................................................GCTGTTGAGAAGAACCCGACCGTGTT....................................................................... 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - -
......ATTGGCTGAAGCTGCGTGCCTGGTacgg........................................................................................................................................................................................................................ 28 acgg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
.......TTGGCTGAAGCTGCGTGCCTGGTGgg......................................................................................................................................................................................................................... 26 gg 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - -
....................................................................................................................................................TAAAGGCTGTTGAGAAGAACCCGACCG........................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - -
.......................................................................................................................................................AGGCTGTTGAGAAGAACCCGACCGTGTT....................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCCTGGggag......................................................................................................................................................................................................................... 29 ggag 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
..........GCTGAAGCTGCGTGCCTGGTGAGgttt..................................................................................................................................................................................................................... 27 gttt 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - -
.......TTGGCTGAAGCTGCGTGCCTGccgg.......................................................................................................................................................................................................................... 25 ccgg 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - -
.......TTGGCTGAAGCTGCGTGCCTGGTGcggt....................................................................................................................................................................................................................... 28 cggt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................GAAGAACCCGACCGTGTTGTGTCTTC............................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................TGAGAGTATATAAGCAGACCTCCCTGtgt............................................................................................................................................................. 29 tgt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................TGAGAGTATATAAGCAGACCTCCCcgg............................................................................................................................................................... 27 cgg 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - -
.........................................................................................................................................................................................................TGGGCGCAACATCTGGTGGCCTGTACgg..................... 28 gg 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCCTGGTGAaa........................................................................................................................................................................................................................ 30 aa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................TGCAATAAAGGCTGTTGAGAAGAAtcat............................................................................... 28 tcat 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
.CCCTGATTGGCTGAAGCTGCGTGCCTagtt........................................................................................................................................................................................................................... 30 agtt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.......TTGGCTGAAGCTGCGTGCCTGGTGcgg........................................................................................................................................................................................................................ 27 cgg 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................AGGCTGTTGAGAAGAACCCGACCGTGT........................................................................ 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - -
....TGATTGGCTGAAGCTGCGTGCacag............................................................................................................................................................................................................................. 25 acag 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
..................................TGATATGGCGTACTGTGAGTGGTTG............................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - -
.....................................................................................................................................................AAAGGCTGTTGAGAAGAACCCGACCGTGT........................................................................ 29 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................................................TTCCTGCAATAAAGGCTGTTGAGAAGt.................................................................................... 27 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.......TTGGCTGAAGCTGCGTGCCTGGTGAGgg....................................................................................................................................................................................................................... 28 gg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................TGAGATGATATGGCGTACTGTGAGTGG.................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - -
...............................................................................................................................................TGCAATAAAGGCTGTTGAGAAGAACCC................................................................................ 27 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - 0.50 - -
.....................................................................................................................................................AAAGGCTGTTGAGAAGAACCCGAC............................................................................. 24 2 0.50 0.50 - - - - - - - - - - - - - 0.50 - - - - - - - -
.............................................................................................................................................CCTGCAATAAAGGCTGTTGAGAAGAACC................................................................................. 28 3 0.33 0.33 0.33 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................TTCCTTGCTGGCCAAGGTGGGCGCAA........................................ 26 3 0.33 0.33 0.33 - - - - - - - - - - - - - - - - - - - - -
................................................GTGAGTGGTTGGGGGCTGAGAGTATAT............................................................................................................................................................................... 27 4 0.25 0.25 - - - - 0.25 - - - - - - - - - - - - - - - - -
...........................................................................................................................TAGCAGCATTGAGGCATTCCTGCAAT..................................................................................................... 26 16 0.12 0.12 0.12 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................TAGCAGCATTGAGGCATTCCTGCAA...................................................................................................... 25 16 0.06 0.06 - - 0.06 - - - - - - - - - - - - - - - - - - -
...................................................................................................................................TTGAGGCATTCCTGCAATAAAGGCTGT............................................................................................ 27 17 0.06 0.06 - - 0.06 - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TGAGGCATTCCTGCAATAAAGGCTGTT........................................................................................... 27 17 0.06 0.06 - - - - - 0.06 - - - - - - - - - - - - - - - -

Antisense strand
GCCCTGATTGGCTGAAGCTGCGTGCCTGGTGAGATGATATGGCGTACTGTGAGTGGTTGGGGGCTGAGAGTATATAAGCAGACCTCCCTGGGTGCCCGGGGTGTGTTGAGGCAATGCTCCCCGTAGCAGCATTGAGGCATTCCTGCAATAAAGGCTGTTGAGAAGAACCCGACCGTGTTGTGTCTTCCTTGCTGGCCAAGGTGGGCGCAACATCTGGTGGCCTGTACAGGGCCCAAGGACAACGACCTTG


Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
..............................................................................................................................................................................................GGCCAAGGTGGGCGtcc........................................... 17 tcc 6.00 0.00 - - - - - - 4.00 - - - 2.00 - - - - - - - - - - -
..................................................................................................................................TTGAGGCATTCCTGCAATAAAGGCTGTTa........................................................................................... 29 a 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................................................CGACCGTGTTGTGTCTTCc............................................................... 19 c 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................................................................GCATTCCTGCAATAAAGGCTGTTGAtcc......................................................................................... 28 tcc 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................................................................TGAGGCATTCCTGCAATAAAGGCTGTTct........................................................................................... 29 ct 1.00 0.06 - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................GAGGCATTCCTGCAATAAAGGCTGTgct............................................................................................ 28 gct 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
......GCTGAAGCTGCGTGCCTGGTGAGAtaaa........................................................................................................................................................................................................................ 28 taaa 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - -
............AAGCTGCGTGCCTGGTGAGtt......................................................................................................................................................................................................................... 21 tt 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - -
....................................................................................................................................TGAGGCATTCCTGCAATAAAGGCTGT............................................................................................ 26 17 0.12 0.12 0.12 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................CAGCATTGAGGCATTCCTGCAATAAAGGC............................................................................................... 29 15 0.07 0.07 - 0.07 - - - - - - - - - - - - - - - - - - - -
................................................................................................................................GCATTGAGGCATTCCTGCAATAAAGGCTGT............................................................................................ 30 17 0.06 0.06 - 0.06 - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TGAGGCATTCCTGCAATAAAGGCTGTTGA......................................................................................... 29 17 0.06 0.06 - - - - - - - - - - - - - - 0.06 - - - - - - -
.............................................................................................................................GCAGCATTGAGGCATTCCTGCAATAA................................................................................................... 26 17 0.06 0.06 - - - - - - - - - - - - - - - - - - - - 0.06 -
..................................................................................................................................ATTGAGGCATTCCTGCAATAAAGGCT.............................................................................................. 26 17 0.06 0.06 - - - - - - - - - - - - - - 0.06 - - - - - - -
..................................................................................................................................ATTGAGGCATTCCTGCAATAAAGGC............................................................................................... 25 18 0.06 0.06 - - - - - - - - - - - - - - - - - - - - - 0.06