| Gene: Aspm | ID: uc007cwh.1_intron_14_0_chr1_141370558_f | SPECIES: mm9 |
|
|
|
(5) OTHER.mut |
(3) PIWI.ip |
(14) TESTES |
| CTGCTATGATTCATCATTCAGACATGTCAAATACAATTCCAGACGAAAAGGTTAGTGAACGACTTCGTCATAATAGCTCTTTGTTTGGCTTTTGAGACAGGGTTTGTCTGTGTAGTCTTGGCTGTCCTGGAATTTGCTCTCTGTTGATCAGTTTGGCCTCAAACTCAGAGATTAGCCTGCCTCTGCCTTCTGAAGGCTGGGATTAAAGGTGTGAGCCACCACACGTGGCTGCAGTGTCCTTCATGCAGCCTGGAGGATGATAGGGGAGACGGTTCCCTCCTGACCCTCTGCTTTCCTCTTCTGTATTTCCTTAGGTGGTTATCACCTATTTGTCATTTCTTTGTGCAAGGCTTTTGGATCTCCG ....................................................((((.((.((((....((((((((..((((((((........)))))))).)))).)))).)))))).))))................................................................................................................................................................................................................................................ ..................................................51........................................................................................141............................................................................................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTTAGTGAACGACTTCGTCATAATAGCTCTTTGTTTGGCTTTTGAGACAGGG...................................................................................................................................................................................................................................................................... | 52 | 1 | 91.00 | 91.00 | 91.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TGTGTAGTCTTGGCTGTCCTGGAAa....................................................................................................................................................................................................................................... | 25 | a | 3.00 | 0.00 | - | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................GTGGTTATCACCTtcgc................................. | 17 | tcgc | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - |
| .............................................................................................................GTGTAGTCTTGGCTGTCCTGGAAa....................................................................................................................................................................................................................................... | 24 | a | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TCTGTGTAGTCTTGGCTGTCCTGctta....................................................................................................................................................................................................................................... | 27 | ctta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................CTTGGCTGTCCTGGAATTTtt................................................................................................................................................................................................................................... | 21 | tt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TGGGATTAAAGGTGTGAGCCACCACACttgt........................................................................................................................................ | 31 | ttgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................TGAGACAGGGTTTGTCTGTGgaga........................................................................................................................................................................................................................................................ | 24 | gaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| CTGCTATGATTCATCATTCAGACATGTCAAATACAATTCCAGACGAAAAGGTTAGTGAACGACTTCGTCATAATAGCTCTTTGTTTGGCTTTTGAGACAGGGTTTGTCTGTGTAGTCTTGGCTGTCCTGGAATTTGCTCTCTGTTGATCAGTTTGGCCTCAAACTCAGAGATTAGCCTGCCTCTGCCTTCTGAAGGCTGGGATTAAAGGTGTGAGCCACCACACGTGGCTGCAGTGTCCTTCATGCAGCCTGGAGGATGATAGGGGAGACGGTTCCCTCCTGACCCTCTGCTTTCCTCTTCTGTATTTCCTTAGGTGGTTATCACCTATTTGTCATTTCTTTGTGCAAGGCTTTTGGATCTCCG ....................................................((((.((.((((....((((((((..((((((((........)))))))).)))).)))).)))))).))))................................................................................................................................................................................................................................................ ..................................................51........................................................................................141............................................................................................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................CTGTGTAGTCTTGGCTGTCCTGGAca......................................................................................................................................................................................................................................... | 26 | ca | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................TGTGTAGTCTTGGCTGTCCTtttt............................................................................................................................................................................................................................................ | 24 | tttt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................CTGTGTAGTCTTGGCTGTCCTccaa............................................................................................................................................................................................................................................ | 25 | ccaa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................GTCTGTGTAGTCTTGGCTGTCCTGGAAct........................................................................................................................................................................................................................................ | 29 | ct | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........TCATTCAGACATGTCcaag................................................................................................................................................................................................................................................................................................................................................ | 19 | caag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................TGAGACAGGGTTTGTCTGtt.............................................................................................................................................................................................................................................................. | 20 | tt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |