| Gene: Cyb5r1 | ID: uc007cru.1_intron_6_0_chr1_136306264_f.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| TGAAAGTCCCTGAAGATCCAACCCAGTGCTTTCTGCTTTTTGCCAACCAGGTTGGTTTCCTTTTCTGAGAGCCAGCACTTCCAAGTTGGCTGTGTGACTAGATGGGCTGAGACAGACAGAACTGGCTTGGGAACTAGTCTAGCATCTGTCCAGAAGCCCCTCTACGAATCCAGAGTCCTTTATAACAATAAGAAGGAATGAGGGCACCATCAAGGAGAAGCCCAGGATTTGGTTTCCAGCCCCCACAATG ..........................................................................((.((((........(((.((...((((.(((((..((((((.((.(((((........)))))))....))))))....))))).))))...)).)))..((((((.((....)).))))))..))))))............................................. .........................................................................74......................................................................................................................................210...................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................TTCCAAGTTGGCTGTGTGACTAGATGG................................................................................................................................................. | 27 | 1 | 13.00 | 13.00 | 7.00 | 2.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................TCCAAGTTGGCTGTGTGACTAGATGG................................................................................................................................................. | 26 | 1 | 8.00 | 8.00 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - |
| ....................................................................................................................................................................................TATAACAATAAGAAGGAATGAGGGCAC........................................... | 27 | 1 | 4.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TAACAATAAGAAGGAATGAGGGCACC.......................................... | 26 | 1 | 3.00 | 3.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TATAACAATAAGAAGGAATGAGGGCACC.......................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ................................................................................CCAAGTTGGCTGTGTGACTAGATGGGC............................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TAAGAAGGAATGAGGGCACCATCAAGG................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TATAACAATAAGAAGGAATGAGGGCA............................................ | 26 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TAACAATAAGAAGGAATGAGGGCACCATC....................................... | 29 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........TGAAGATCCAACCCAGTGCTTTCTGCTT.................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................TGACTAGATGGGCTGAGACAGACAGA.................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TAGCATCTGTCCAGAAGCCCCTCctc..................................................................................... | 26 | ctc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................AGTGCTTTCTGCTTTTTGCCAACCAGac...................................................................................................................................................................................................... | 28 | ac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................CAACCCAGTGCTTTCTGCTTTTTGCCAA............................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................CCCAGTGCTTTCTGCTTTTTGCCAACCAG........................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................ACCCAGTGCTTTCTGCTTTTTGCCAAC........................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................................................................TTATAACAATAAGAAGGAATGAGGGCAC........................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTATAACAATAAGAAGGAATGAGGGC............................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................CCCAGTGCTTTCTGCTTTTTGCCAACC.......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................TTTATAACAATAAGAAGGAATGAGGGCAC........................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................CCAAGTTGGCTGTGTGACTAGATGGGCT.............................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TAACAATAAGAAGGAATGAGGGCACCAT........................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TTCCAAGTTGGCTGTGTGACTAGATGGGC............................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| TGAAAGTCCCTGAAGATCCAACCCAGTGCTTTCTGCTTTTTGCCAACCAGGTTGGTTTCCTTTTCTGAGAGCCAGCACTTCCAAGTTGGCTGTGTGACTAGATGGGCTGAGACAGACAGAACTGGCTTGGGAACTAGTCTAGCATCTGTCCAGAAGCCCCTCTACGAATCCAGAGTCCTTTATAACAATAAGAAGGAATGAGGGCACCATCAAGGAGAAGCCCAGGATTTGGTTTCCAGCCCCCACAATG ..........................................................................((.((((........(((.((...((((.(((((..((((((.((.(((((........)))))))....))))))....))))).))))...)).)))..((((((.((....)).))))))..))))))............................................. .........................................................................74......................................................................................................................................210...................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................AGTGCTTTCTGCTTTacta................................................................................................................................................................................................................... | 19 | acta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................CCTCTACGAATCCAGAGTCCTTTA.................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................TCTACGAATCCAGAGTCCTTTATA.................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................CCTTTTCTGAGAGCCAGCACTTCCA....................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |