| Gene: Rab42 | ID: uc007cnr.1_intron_4_0_chr1_133608803_f | SPECIES: mm9 |
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(5) OTHER.mut |
(2) PIWI.ip |
(13) TESTES |
| TGAGAACCATAATCTTCATTTAAATCCCACGTGCTGGTGTGGACACACAGGCTCACTCCTTTGGAGAGTATTTTTGATGCCTTCGATGTACATTGCACTGAAGTCACCAGACACACAAAGCAGACATGAGTCCTTCACTCCCAGAAGCGCACCTGGAGAGAGAGGGCCAGCAGACATGAGCAAGACAGACAACAGCAACAAGGTACTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGAGCTACAGGAAGAACATGCCAGGAGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCATTCCCTGAGGACTCAAA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037903(GSM510439) testes_rep4. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................................................TGTGACGGTGACCGTTGGGCTGGCAGCTG..................................................................................................... | 29 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................CAGGAAGAACATGCCAGGAGAGGGA................................................................ | 25 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................AACAAGGTACTGTTTTAGACAAAGGG.................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................CAACAAGGTACTGTTTTAGACAAAGGGG................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................TGTGACGGTGACCGTTGGGCTGGCAGCTta.................................................................................................... | 30 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................GCAGACATGAGCAAGACAGACAACAGC............................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................CAGGAAGAACATGCCAGGAGAGGGAGC.............................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................................................................................................................................TACAGGAAGAACATGCCAGGAGAGG.................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................TGACCGTTGGGCTGGCAGCTGCAGGAAG.............................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................................................................AGGTACTGTTTTAGACAAAGGGG................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................TGTGACGGTGACCGTTGGGCTGGCAG........................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................CCAGCAGACATGAGCAAGcggg.................................................................................................................................................................................... | 22 | cggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................................................................................................................................CAAGGCTCTGAGGCAATGGGCAGA.............................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| TGAGAACCATAATCTTCATTTAAATCCCACGTGCTGGTGTGGACACACAGGCTCACTCCTTTGGAGAGTATTTTTGATGCCTTCGATGTACATTGCACTGAAGTCACCAGACACACAAAGCAGACATGAGTCCTTCACTCCCAGAAGCGCACCTGGAGAGAGAGGGCCAGCAGACATGAGCAAGACAGACAACAGCAACAAGGTACTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGAGCTACAGGAAGAACATGCCAGGAGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCATTCCCTGAGGACTCAAA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037903(GSM510439) testes_rep4. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................................................GCAGCTGCAGGAAGAGCTACAGGAAGA................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................AAAGCAGACATGAGTCCTTCACTCCCA................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................TGAGCAAGACAGACAACAGCAACA........................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................GCAGACATGAGTCCTTCACTCCCAGA............................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .ACCATAATCTTCATaaaa............................................................................................................................................................................................................................................................................................................................................................. | 18 | aaaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |