| Gene: Rab3gap1 | ID: uc007clc.1_intron_17_0_chr1_129831132_f.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(6) TESTES |
| GCGCACGCATGCAGAGTGCCTGTCTCCTCTCCGATATGGAGTCTTTTAAGGTAGGTCACACTTCCAGAGCTCTCTGAGTCTGTCTTCAGCTATTCTGGGATGAAACTGTGAACAACACTATAAAGTGACATGAAGGTTGTGTCTTTTTTAAGTGTTTGGATTTATTACTTGTTACAAAATGCTTCTTCCAGCCTGGAAAGGACATGTCAGACTCACTTCTTAGGTTTGTAAAAGAAAGTCAACCTGCTTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAGGTCACACTTCCAGAGCTCTCTGAGTCTGTCTTCAGCTATTCTGGGATG.................................................................................................................................................... | 52 | 1 | 94.00 | 94.00 | 94.00 | - | - | - | - | - | - |
| .........TGCAGAGTGCCTGTCTCCTCTCCGA........................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - |
| .........TGCAGAGTGCCTGTCTCCTCTCCGATA...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 |
| ......GCATGCAGAGTGCCTGTCTCCTCTCC.......................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................TGTCTTTTTTAAGTacgg............................................................................................. | 18 | acgg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - |
| .........TGCAGAGTGCCTGTCTCCTCTCCG......................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ................................GATATGGAGTCTTTTAAG........................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - |
| GCGCACGCATGCAGAGTGCCTGTCTCCTCTCCGATATGGAGTCTTTTAAGGTAGGTCACACTTCCAGAGCTCTCTGAGTCTGTCTTCAGCTATTCTGGGATGAAACTGTGAACAACACTATAAAGTGACATGAAGGTTGTGTCTTTTTTAAGTGTTTGGATTTATTACTTGTTACAAAATGCTTCTTCCAGCCTGGAAAGGACATGTCAGACTCACTTCTTAGGTTTGTAAAAGAAAGTCAACCTGCTTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................TCTGTCTTCAGCTAtaac.............................................................................................................................................................. | 18 | taac | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - |