(1)
OTHER.ip
(8)
OTHER.mut
(5)
PIWI.ip
(2)
PIWI.mut
(1)
TDRD1.ip
(31)
TESTES

Sense strand
ACAGCAAGCAAGGATTTGGCACAGACATCCTATTTCATGGCTACCAACAGGTTGTTATCCTGACCCTCTTTGTTGCACTGTTGTAGCACACTATAGCTTCCTTTAATGCAGGGCCCCCTCGACGTGTCTCTTGCCCTTGTTGCAACAGGAGACTGGACCATCTACTGTGGTGGTACCTTCCTGGTTGCTTTGCGGTGTATTGTACAAGGGACTTTGGGCACAGAGGGGTTAAATGCACACTGTGAAGTGT
..................................................................................................(((.....((.(((....)))))....((((((((............)))))))).))).............................................................................................
..................................................................................................99..................................................................167.................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
..AGCAAGCAAGGATTTGGCACAGACATC............................................................................................................................................................................................................................. 27 1 9.00 9.00 4.00 2.00 - 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................TGTACAAGGGACTTTGGGC............................... 19 1 8.00 8.00 - - 8.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................TGTTGCAACAGGAGACTGGACCATCT....................................................................................... 26 1 5.00 5.00 2.00 2.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..........................................................................................................................................................................................................TACAAGGGACTTTGGGCACAGAGGGGT..................... 27 1 4.00 4.00 1.00 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................TTGTTGCAACAGGAGACTGGACCATC........................................................................................ 26 1 4.00 4.00 2.00 - - - - - - - 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - -
............................................................................................................................................TGCAACAGGAGACTGGACCATCTACT.................................................................................... 26 1 3.00 3.00 - 1.00 - - - - - - - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
.........................................................................................................................................TGTTGCAACAGGAGACTGGACCATCTA...................................................................................... 27 1 3.00 3.00 - 1.00 - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - -
......................................................................................................................................CCTTGTTGCAACAGGAGACTGGACCATC........................................................................................ 28 1 3.00 3.00 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................TGTACAAGGGACTTTGGGCACAGAGG........................ 26 1 3.00 3.00 1.00 - - - - - 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................TTGTACAAGGGACTTTGGGCACAGAGG........................ 27 1 2.00 2.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................TGTTGCAACAGGAGACTGGACCATCTAC..................................................................................... 28 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
..AGCAAGCAAGGATTTGGCACAGACAT.............................................................................................................................................................................................................................. 26 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................TAATGCAGGGCCCCCTCGACGTGTCTC........................................................................................................................ 27 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................TGTACAAGGGACTTTGGGCACAGAGGG....................... 27 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................TGTTGCAACAGGAGACTGGACCATC........................................................................................ 25 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................TGCGGTGTATTGTACAAGGGACTTTGGG................................ 28 1 2.00 2.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - 1.00
.......................................................................................................................................................................................................TTGTACAAGGGACTTTGGGCACAGAG......................... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................TTGCCCTTGTTGCAACAGGAGACTGGACCt.......................................................................................... 30 t 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................TTTCATGGCTACCAACAGGTTGTTATCCTGAC.......................................................................................................................................................................................... 32 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................CCCTCTTTGTTGCACTGTTGTAGCACACTA............................................................................................................................................................. 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..................................................................................................TCCTTTAATGCAGGGCCCCCTCGACGT............................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
............................................................................ACTGTTGTAGCACACTATAGCTTCC..................................................................................................................................................... 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TATTGTACAAGGGACTTTGGGCACAGAGG........................ 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGTATTGTACAAGGGACTTTGGGCAC............................. 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......GCAAGGATTTGGCACAGACATCCTATT........................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................TTGCGGTGTATTGTACA............................................ 17 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................GCTTTGCGGTGTATTGTACAAGGGAC...................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................CCTTGTTGCAACAGGAGACTGGACCA.......................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................TTCCTGGTTGCTTTGCGGTGTATTGT............................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................TTGCAACAGGAGACTGGACCATCT....................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...........................................................................................................................................TTGCAACAGGAGACTGGACCATCTAC..................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................ACCCTCTTTGTTGCACTGTTGTAGCAC................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...........................................................CTGACCCTCTTTGTTGCACTGTTGTAGC................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................CTGGTTGCTTTGCGGTGTATTGTACAA........................................... 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................ACCCTCTTTGTTGCACTGTTGT...................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................TTGTTGCAACAGGAGACTGGACC........................................................................................... 23 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................CCTTGTTGCAACAGGAGACTGGACC........................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................TTGTTGCAACAGGAGACTGGACCA.......................................................................................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................GACCCTCTTTGTTGCACTGTTGTAGC................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................TTCCTGGTTGCTTTGCGGTGTATTGTACAA........................................... 30 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................CACACTATAGCTTCCTTTAATGCAGGGC........................................................................................................................................ 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TCCTGGTTGCTTTGCGGTGTATTGTACAA........................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................GCTTCCTTTAATGCAGGGCCCCCTCGAC............................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGTATTGTACAAGGGACTTTGGGCACAGA.......................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...................................................................................................................................TGCCCTTGTTGCAACAGGAGACTGGACC........................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TACAAGGGACTTTGGGCACAGAGGG....................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...............................................................................................................................................AACAGGAGACTGGACCATCT....................................................................................... 20 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................TCGACGTGTCTCTTGCCCTTGTTGCAACA....................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..................................................................................................................................................................................TCCTGGTTGCTTTGCGGTGTATTGTACtt........................................... 29 tt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................TAATGCAGGGCCCCCTCGACGTGTCT......................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..............................................................ACCCTCTTTGTTGCACTGTTGTAGCACACT.............................................................................................................................................................. 30 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......AGCAAGGATTTGGCACAGACATCCTAT......................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.............................................................................................................................................................................................TTGCGGTGTATTGTACAA........................................... 18 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................TTGTACAAGGGACTTTGGGCACAGAGGa....................... 28 a 1.00 2.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....................................................................................................................................CCCTTGTTGCAACAGGAGACTGGACC........................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................TTCCTGGTTGCTTTGCGGTGTATTGTAtt............................................ 29 tt 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................TTCCTTTAATGCAGGGCCCCCTCGAC............................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................TTTAATGCAGGGCCCCCTCGACGTGTC.......................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................GTGTATTGTACAAGGGACTTTGGGCACAGAGGG....................... 33 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.........................................................TCCTGACCCTCTTTGTTGCACTGTTGTt..................................................................................................................................................................... 28 t 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................ACCCTCTTTGTTGCACTGTTGTAGCACAC............................................................................................................................................................... 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................CCCTTGTTGCAACAGGAGACTGGACCA.......................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
ACAGCAAGCAAGGATTTGGCACAGACATCCTATTTCATGGCTACCAACAGGTTGTTATCCTGACCCTCTTTGTTGCACTGTTGTAGCACACTATAGCTTCCTTTAATGCAGGGCCCCCTCGACGTGTCTCTTGCCCTTGTTGCAACAGGAGACTGGACCATCTACTGTGGTGGTACCTTCCTGGTTGCTTTGCGGTGTATTGTACAAGGGACTTTGGGCACAGAGGGGTTAAATGCACACTGTGAAGTGT
..................................................................................................(((.....((.(((....)))))....((((((((............)))))))).))).............................................................................................
..................................................................................................99..................................................................167.................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)