| Gene: AK053246 | ID: uc007cit.1_intron_1_0_chr1_121417056_r | SPECIES: mm9 |
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(2) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| GTGTCCCAGCCTGGCCCGCTTCTCTGCTGCTCGGTTTTTATGGTTGTGTGGTGAGTACAGACATATGTGTCATGTATGGAGGTTAGAGGACGACTTGCAGGGTTCAGTTTTCTTCCTCAACTGTGAAATTCAGACCTTGCCCACTGAGCGATCTCACTTCCCAAAAGATTTTAGTAATCTCCAGCTGTGCTTTGCCCTGGGATTATCCTTCTCAGTGAAGACATGAGTGCTAGTTTAATCTGAGTAGAGGTTCCCCAAGGGTAAGTGTGCCTGCCGATACAGGGATGATCCGGAGCACTGCTCCTGTCATTCGCAGTGACAGCAGGATCTCTAAGTTCCCAGCCTTAGACTGAATGTGGAAGCTGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................TGTCATGTATGGAGGTTAGAGGACGAC................................................................................................................................................................................................................................................................................ | 27 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................TGTGTCATGTATGGAGGTTAGAGGA.................................................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................TGCCTGCCGATACAGGGATGATCCGGA........................................................................ | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................TCCCAGCCTTAGACTGAATGTGGAAGC... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................................GTGCTAGTTTAATCTGAGTAGAGGTTC................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGTATGGAGGTTAGAGGACGACTTG............................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................ATGTATGGAGGTTAGAGGACGACTTGC............................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TAGAGGACGACTTGCAGGGTTCAGTT................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................GCTGCTCGGTTTTTATGGTTGTGTGtgac........................................................................................................................................................................................................................................................................................................................ | 29 | tgac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................ACTGAGCGATCTgtca................................................................................................................................................................................................................ | 16 | gtca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................ACGACTTGCAGGGTTCAGTTTTCTTCCTCA....................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGTGTCATGTATGGAGGTTAGAGGACGAC................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................TGCTGCTCGGTTTTTATGGTTGTt.............................................................................................................................................................................................................................................................................................................................. | 24 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TAGAGGACGACTTGCAGGGTTCAGTTT................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................GTTCCCAGCCTTAGtcat.............. | 18 | tcat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................CTGCCGATACAGGGATGATCCGGAGC...................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TTCCTCAACTGTGAAATTCAGACCTTGC.................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................CCTTCTCAGTGAAGACATGAGTGCTA...................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TCTGCTGCTCGGTTTTTATGGTTGT............................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................ACGACTTGCAGGGTTCAGTTTTCTTCCTt........................................................................................................................................................................................................................................................ | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................................................................................TGAGTGCTAGTTTAATCTGAGTAGAG..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................ACGACTTGCAGGGTTCAGTTTTCTTCC.......................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGTGTCATGTATGGAGGTTAGAGGAC................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| GTGTCCCAGCCTGGCCCGCTTCTCTGCTGCTCGGTTTTTATGGTTGTGTGGTGAGTACAGACATATGTGTCATGTATGGAGGTTAGAGGACGACTTGCAGGGTTCAGTTTTCTTCCTCAACTGTGAAATTCAGACCTTGCCCACTGAGCGATCTCACTTCCCAAAAGATTTTAGTAATCTCCAGCTGTGCTTTGCCCTGGGATTATCCTTCTCAGTGAAGACATGAGTGCTAGTTTAATCTGAGTAGAGGTTCCCCAAGGGTAAGTGTGCCTGCCGATACAGGGATGATCCGGAGCACTGCTCCTGTCATTCGCAGTGACAGCAGGATCTCTAAGTTCCCAGCCTTAGACTGAATGTGGAAGCTGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......CAGCCTGGCCCGCTT......................................................................................................................................................................................................................................................................................................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |