uc007cet.1_intron_1_0_chr1_95888342

ATCATGCCCAGCACCTGACCCCAGTGAAGAAAGTTGTTGAAAGGACTGAGGTGAGGCCTTCCCACTACCTTCTTCTCTTTTAAGTCAGGAACCACAGAACTTTTAATGTTTAATAATTAGGAGACAGTTTGCCAGGATGTGAGGACTCTAAAACTCACGTGAAAAACTGGGAGGGGAAGGGGAACACTTTGTAAACCTAACACATGCTTTATAAAACCTAAGTACTTTCAAGTCCCTGTTCCAGTATCAC
...................................................................(((((..(((......................((((((((........)))))))).((((((......(((((((..........)))))))...)))))).)))..)))))......................................................................
...................................................................68..............................................................................................................180....................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)

SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)

SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)

SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)

SRR014235(GSM319959)
2 dpp total. (testes)

SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)

SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)

SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)

SRR014236(GSM319960)
10 dpp total. (testes)

SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)

SRR014231(GSM319955)
16.5 dpc total. (testes)

SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)

SRR014234(GSM319958)
Ovary total. (ovary)

SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)

SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)

mjTestesWT2()
Testes Data. (testes)

SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)

SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)

SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)

SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)

SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)

SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)

SRR014229(GSM319953)
10 dpp MILI. (mili testes)

SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)

SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)

GSM179088(GSM179088)
Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes)

SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)

GSM475279(GSM475279)
Miwi-IP. (miwi testes)

mjTestesKO6()
Testes Data. (Zcchc11 testes)

mjTestesWT3()
Testes Data. (testes)

SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)

SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)

GSM509280(GSM509280)
small RNA cloning by length. (testes)

mjTestesWT4()
Testes Data. (testes)

SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)

SRR037901(GSM510437)
testes_rep2. (testes)

GSM475281(GSM475281)
total RNA. (testes)

.....................................TGAAAGGACTGAGGTGAGGCCTTCCC...........................................................................................................................................................................................

43.00

13.00

10.00

7.50

5.00

3.50

0.50

1.00

0.50

..........................AAGAAAGTTGTTGAAAGGACTGAGGTG.....................................................................................................................................................................................................

6.33

1.00

0.33

1.00

1.67

0.67

0.33

........................................................................TTCTCTTTTAAGTCAGGAACCACAGAAC......................................................................................................................................................

5.33

0.67

0.33

2.67

0.67

1.00

.....................................TGAAAGGACTGAGGTGAGGCCTTCCCACT........................................................................................................................................................................................

4.50

1.50

1.00

0.50

.....................................TGAAAGGACTGAGGTGAGGCCTTCCCAC.........................................................................................................................................................................................

4.50

0.50

2.50

1.00

0.50

.....................................TGAAAGGACTGAGGTGAGGCCTTCCCA..........................................................................................................................................................................................

4.50

2.50

0.50

1.00

0.50

....................................TTGAAAGGACTGAGGTGAGGCCTTCCC...........................................................................................................................................................................................

4.00

0.50

2.00

1.00

0.50

....................................................................................................................................................TAAAACTCACGTGAAAAACTGGGAGGGG..........................................................................

3.00

0.50

1.00

0.50

.................................................................................................................TAATTAGGAGACAGTTTGCCAGGATG...............................................................................................................

2.50

1.00

0.50

................................................................................TAAGTCAGGAACCACAGAACTTTTAATGT.............................................................................................................................................

2.33

0.33

0.67

0.33

...................................................................................................................................................................................................................................TCAAGTCCCTGTTCCgcca....

gcca

2.00

0.00

1.00

.............................................................................TTTTAAGTCAGGAACCACAGAACTTTT..................................................................................................................................................

2.00

1.67

0.33

...............................................................................................................................................................TGAAAAACTGGGAGGGGAAGGGGAA..................................................................

2.00

1.00

..............................................................................................................TAATAATTAGGAGACAGTTTGCCcgg..................................................................................................................

cgg

2.00

0.00

1.00

...............................................................................................................................................................TGAAAAACTGGGAGGGGAAGGGGAAC.................................................................

2.00

1.00

......................................................................TCTTCTCTTTTAAGTCAGGAACCACAGA........................................................................................................................................................

2.00

0.33

0.67

0.33

..........................AAGAAAGTTGTTGAAAGGACTGAGGT......................................................................................................................................................................................................

1.67

0.33

0.67

0.33

................................................................................TAAGTCAGGAACCACAGAACTTTTAATGTT............................................................................................................................................

1.67

0.33

..........................AAGAAAGTTGTTGAAAGGACTGAGG.......................................................................................................................................................................................................

1.67

0.33

1.00

0.33

......................................................................TCTTCTCTTTTAAGTCAGGAACCACAGAAC......................................................................................................................................................

1.67

0.33

....................................................................................................................................................TAAAACTCACGTGAAAAACTGGGAGGG...........................................................................

1.50

0.50

...............TGACCCCAGTGAAGAAAGTTGTTGAA.................................................................................................................................................................................................................

1.50

0.50

..............................................................................................................TAATAATTAGGAGACAGTTTGCCAGG..................................................................................................................

1.50

1.00

0.50

....................................................................................................................................................TAAAACTCACGTGAAAAACTGGGAGG............................................................................

1.50

1.00

0.50

...........................AGAAAGTTGTTGAAAGGACTGAGGTG.....................................................................................................................................................................................................

1.33

0.33

0.67

................................................................................TAAGTCAGGAACCACAGAACTTTTAATG..............................................................................................................................................

1.33

0.67

0.33

....................................TTGAAAGGACTGAGGTGAGGCCTTtt............................................................................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................CTCACGTGAAAAACTGGGAGGGGAAGa......................................................................

1.00

0.00

1.00

tggc

1.00

0.00

1.00

...........................................................................................................................................TGAGGACTCTAAAACTCACGTGAAgcac...................................................................................

gcac

1.00

0.00

1.00

....TGCCCAGCACCTGACCCCAGTGAAGtaa..........................................................................................................................................................................................................................

taa

1.00

0.00

1.00

0.33

..................................TGTTGAAAGGACTGAGGTGAGGCCT...............................................................................................................................................................................................

1.00

0.33

1.00

0.67

0.33

...............TGACCCCAGTGAAGAAAGTTGTTGAAAGGACTGt.........................................................................................................................................................................................................

1.00

0.00

1.00

..........................AAGAAAGTTGTTGAAAGGACTGAGGTGA....................................................................................................................................................................................................

1.00

0.33

....................................TTGAAAGGACTGAGGTGAGGCCTTCC............................................................................................................................................................................................

1.00

0.50

..............................................................................................................TAATAATTAGGAGACAGTTTGCCAGGAT................................................................................................................

1.00

0.50

......................................................................TCTTCTCTTTTAAGTCAGGAACCACAG.........................................................................................................................................................

0.67

0.33

...............................................................................TTAAGTCAGGAACCACAGAACTTTTAATGT.............................................................................................................................................

0.67

0.33

0.67

0.33

................................................................................TAAGTCAGGAACCACAGAACTTTTAATa..............................................................................................................................................

0.67

0.33

0.67

........................TGAAGAAAGTTGTTGAAAGGACTGAGG.......................................................................................................................................................................................................

0.67

.....................................TGAAAGGACTGAGGTGAGGCC................................................................................................................................................................................................

0.67

............................GAAAGTTGTTGAAAGGACTGAGGTGA....................................................................................................................................................................................................

0.67

0.33

...........................AGAAAGTTGTTGAAAGGACTGAGGTGA....................................................................................................................................................................................................

0.67

..............................AAGTTGTTGAAAGGACTGAGGTGAGGC.................................................................................................................................................................................................

0.67

0.33

...............................................................................................................................................................TGAAAAACTGGGAGGGGAAGGGGA...................................................................

0.50

..................................TGTTGAAAGGACTGAGGTGAGGCCTTCCC...........................................................................................................................................................................................

0.50

.................................................................................................................................TGCCAGGATGTGAGGACTCTAAAAC................................................................................................

0.50

...............................................................................................................................................................TGAAAAACTGGGAGGGGAAGGGGAAt.................................................................

0.50

2.00

0.50

.........................................AGGACTGAGGTGAGGCCTTCCCACTAC......................................................................................................................................................................................

0.50

.................................................................................................................TAATTAGGAGACAGTTTGCCAGGATGTG.............................................................................................................

0.50

...............................................................................................................................................................TGAAAAACTGGGAGGGGAAGGGGAACt................................................................

0.50

2.00

0.50

.....................................TGAAAGGACTGAGGTGAGGCCTTCC............................................................................................................................................................................................

0.50

.....................................TGAAAGGACTGAGGTGAGGCCTTC.............................................................................................................................................................................................

0.50

..................................TGTTGAAAGGACTGAGGTGAGGCCTTC.............................................................................................................................................................................................

0.50

.................................................................................................................................TGCCAGGATGTGAGGACTCTAAAACTCA.............................................................................................

0.50

...............TGACCCCAGTGAAGAAAGTTGTTGAAAGGAC............................................................................................................................................................................................................

0.50

.........................................................CTTCCCACTACCTTCTTCTCTTTTAAGTC....................................................................................................................................................................

0.50

....TGCCCAGCACCTGACCCCAGTGAAGAA...........................................................................................................................................................................................................................

0.50

...............................................................................................................................................................TGAAAAACTGGGAGGGGAAGGGGAt..................................................................

0.50

...........................................................TCCCACTACCTTCTTCTCTTTTAAGTCAGGA................................................................................................................................................................

0.50

.................................................................................................................TAATTAGGAGACAGTTTGCCAGGAT................................................................................................................

0.50

.............................................CTGAGGTGAGGCCTTCCCACTACC.....................................................................................................................................................................................

0.50

....TGCCCAGCACCTGACCCCAGTGAAGAAAGT........................................................................................................................................................................................................................

0.50

...............TGACCCCAGTGAAGAAAGTTGTTGA..................................................................................................................................................................................................................

0.50

.....................................TGAAAGGACTGAGGTGAGGCCTTCCCAt.........................................................................................................................................................................................

0.50

4.50

0.50

.................................................................................................................................................................AAAAACTGGGAGGGGAAGGGGAACA................................................................

0.50

..........................................................TTCCCACTACCTTCTTCTCTTTTAAGTC....................................................................................................................................................................

0.50

.......................................................................................................TAATGTTTAATAATTAGGAGACAGTTTGC......................................................................................................................

0.50

0.33

................................GTTGTTGAAAGGACTGAGGTGAGGC.................................................................................................................................................................................................

0.33

...............................AGTTGTTGAAAGGACTGAGGTGAG...................................................................................................................................................................................................

0.33

.................................................................................AAGTCAGGAACCACAGAACTTTTAATGTTTA..........................................................................................................................................

0.33

................................................................................................GAACTTTTAATGTTTAATAATTAGGAGAC.............................................................................................................................

0.33

.......................................................................................................TAATGTTTAATAATTAGGAGACAGTTT........................................................................................................................

0.33

.............................................................................TTTTAAGTCAGGAACCACAGAACTTTTA.................................................................................................................................................

0.33

..................................................................................................................................................................................GGGGAACACTTTGTAAACC.....................................................

0.33

.....................................................................................................TTTAATGTTTAATAATTAGGAGACAGTT.........................................................................................................................

0.33

..............................AAGTTGTTGAAAGGACT...........................................................................................................................................................................................................

0.33

..............................................................CACTACCTTCTTCTCTTTTAAGTCAGG.................................................................................................................................................................

0.33

.......................................................................................................................................GATGTGAGGACTCTAAAAC................................................................................................

0.33

................................GTTGTTGAAAGGACTGAGGTGAGGCCT...............................................................................................................................................................................................

0.33

...........................................................................................................................................................................AGGGGAAGGGGAACACTTTGTAAAC......................................................

0.33

......................................................................TCTTCTCTTTTAAGTCAGGAACCACAGc........................................................................................................................................................

0.33

0.67

0.33

..............................AAGTTGTTGAAAGGACTGAGGTGAG...................................................................................................................................................................................................

0.33

.................................................................TACCTTCTTCTCTTTTAAGTCAGGAAC..............................................................................................................................................................

0.33

..............................................................................................................TAATAATTAGGAGACAGTT.........................................................................................................................

0.33

...........................AGAAAGTTGTTGAAAGGACTGAGG.......................................................................................................................................................................................................

0.33

...........................AGAAAGTTGTTGAAAGGACTGAGGT......................................................................................................................................................................................................

0.33

.........................GAAGAAAGTTGTTGAAAGGACTGAGGTG.....................................................................................................................................................................................................

0.33

.......................................................................................................TAATGTTTAATAATTAGG.................................................................................................................................

0.33

...........................................................................................................................................................................AGGGGAAGGGGAACACTTTGTAAACCTA...................................................

0.33

....................................................................................TCAGGAACCACAGAACTTTTAATGTTTAA.........................................................................................................................................

0.33

........................................................................TTCTCTTTTAAGTCAGGAACCACAGA........................................................................................................................................................

0.33

..............................................................................TTTAAGTCAGGAACCACAGAACTTTT..................................................................................................................................................

0.33

................................................................................TAAGTCAGGAACCACAGAACTTTTAATGTTT...........................................................................................................................................

0.33

.........................GAAGAAAGTTGTTGAAAGGACTGAG........................................................................................................................................................................................................

0.33

........................................................................TTCTCTTTTAAGTCAGGAACCACAGAACT.....................................................................................................................................................

0.33

....................................................................................TCAGGAACCACAGAACTTTTAATGTTT...........................................................................................................................................

0.33

........................TGAAGAAAGTTGTTGAAAGGACTGAGGT......................................................................................................................................................................................................

0.33

.....................................................................TTCTTCTCTTTTAAGTCAGGAACCACAGA........................................................................................................................................................

0.33

...................CCCAGTGAAGAAAGTTGTTGAAAGGACTG..........................................................................................................................................................................................................

0.33

................................................................................TAAGTCAGGAACCACAGAACTTTTAAT...............................................................................................................................................

0.33

..............................................................................TTTAAGTCAGGAACCACAGAACTTTTAAT...............................................................................................................................................

0.33

............................GAAAGTTGTTGAAAGGACTGAGGTGAGGC.................................................................................................................................................................................................

0.33

.....................CAGTGAAGAAAGTTGTTGAAAGGACTG..........................................................................................................................................................................................................

0.33

...........................................................................TCTTTTAAGTCAGGAACCACAGAACTTTT..................................................................................................................................................

0.33

.............................................................................TTTTAAGTCAGGAACCACAGAACTTTTAAT...............................................................................................................................................

0.33

.......................................................................................................TAATGTTTAATAATTAGGAGACAGTT.........................................................................................................................

0.33

.............................................................................................ACAGAACTTTTAATGT.............................................................................................................................................

0.08