| Gene: Rnpepl1 | ID: uc007cbw.1_intron_9_0_chr1_94815904_f | SPECIES: mm9 |
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(4) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| ATGACTACTATCCTGATCTTCACAGGGTCCGCCGTTTCCTGGAAAGCCAGGTGCAACTACATGCCCGGGCATGACTGGAGGGTGGGACAGCATCCCCACTCCTTGCCCAGCCCTTATAGCCCAAATTCTGAGACAGCCTAGATGGAGAGGGGAGGGTAAGACTGATGGGGGCACTGTAGCATGTGAGTCCAGGCAAAGCCATCCTGAGCATCTGGGGCACATCTGAGATCTGGGTGGTGGAGGGTACGCAGGGAGCCTGCTACCGTGACGCAGTGCCTTCCACAGATGTCGCGCATGTACACCATCCCACTGTACGAGGACCTCTGCACTGGTGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................................................................................................CACTGTACGAGGACCTCTGC........ | 20 | 1 | 12.00 | 12.00 | 12.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................TGATGGGGGCACTGTAGCATGTGAGT................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | - | - | - | - | 4.00 | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGAGATCTGGGTGGTGGAGGGTA......................................................................................... | 23 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................TGATGGGGGCACTGTAGCATGTGAGTC.................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................................................TGGGGGCACTGTAGCATGTGAGTCC................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGTAGCATGTGAGTCCAGGCAAAGCCATC.................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TCTGAGATCTGGGTGGTGGAGGGT.......................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................TACCGTGACGCAGTGCCTTCCACAGAT................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................TTCTGAGACAGCCTAGATGGAGAGGGG....................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TAGCCCAAATTCTGAGACAGCCTAGATG............................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................TAGCCCAAATTCTGAGACAGCCTAGAT................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGAGATCTGGGTGGTGGAGGGTAC........................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGAGACAGCCTAGATGGAGAGGGGA...................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................TTCTGAGACAGCCTAGATGGAGAGGG........................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................................................................................TGAGATCTGGGTGGTGGAGGGTACa....................................................................................... | 25 | a | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TAAGACTGATGGGGGCACTGTAGCA.......................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................GACTGATGGGGGCACTGTA............................................................................................................................................................. | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ATGACTACTATCCTGATCTTCACAGGGTCCGCCGTTTCCTGGAAAGCCAGGTGCAACTACATGCCCGGGCATGACTGGAGGGTGGGACAGCATCCCCACTCCTTGCCCAGCCCTTATAGCCCAAATTCTGAGACAGCCTAGATGGAGAGGGGAGGGTAAGACTGATGGGGGCACTGTAGCATGTGAGTCCAGGCAAAGCCATCCTGAGCATCTGGGGCACATCTGAGATCTGGGTGGTGGAGGGTACGCAGGGAGCCTGCTACCGTGACGCAGTGCCTTCCACAGATGTCGCGCATGTACACCATCCCACTGTACGAGGACCTCTGCACTGGTGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................................................................GCCTTCCACAGATGTCGCGCATGTA.................................... | 25 | 1 | 10.00 | 10.00 | 5.00 | 4.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................GCGCATGTACACCATCCCACTGTACGA.................. | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................CCTTATAGCCCAAATTCTGAGACAGCCTA................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| .......................................................................................................................CCCAAATTCTGAGACAGCCTAGA................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................GCCCTTATAGCCCAAATTCTGAGACAGCCTA................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................TCCTTGCCCAGCCCTTATAGCCCAAA.................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................CCACAGATGTCGCGCATGTACACCA............................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................TCACAGGGTCCGCCGTTTCCTGGA.................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................TCCCCACTCCTTGCata..................................................................................................................................................................................................................................... | 17 | ata | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |