| Gene: BC056923 | ID: uc007caj.1_intron_0_0_chr1_93263226_f.5p | SPECIES: mm9 |
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(8) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(23) TESTES |
| CGCAGCCGCCCGGGGCCGAGCTGCCCGCCCCGCCAGCCAACAGCCCGCCGGTAAGACGCAGCCGCGCCCCACATCTTCCTGTCCCGGGGGGCCCTAAGACGGTGGGGAAGGTGGCACCCCTTGCTGCGCAGTGTCCAACACTGGGGATACGTCGCTCTCAGGGGCTCTGTGAGACCCAGGGTTGGGTGGATGCGTCCTCTGTACCGTGGCTTTGGCGGCAGAACTCCACTAGGCCAGTAGGAGAGATTGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR037901(GSM510437) testes_rep2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................CGGTGGGGAAGGTGGCt...................................................................................................................................... | 17 | t | 184.00 | 77.00 | 67.00 | 35.00 | 16.00 | 17.00 | 37.00 | 2.00 | 4.00 | 1.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCtcg.................................................................................................................................... | 19 | tcg | 131.00 | 77.00 | 43.00 | 32.00 | 23.00 | 12.00 | 9.00 | 5.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCtc..................................................................................................................................... | 18 | tc | 106.00 | 77.00 | 43.00 | 22.00 | 5.00 | 14.00 | 2.00 | 18.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................CGGTGGGGAAGGTGGCtcgg................................................................................................................................... | 20 | tcgg | 104.00 | 77.00 | 35.00 | 8.00 | 15.00 | 13.00 | 20.00 | 2.00 | 7.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGC....................................................................................................................................... | 16 | 1 | 77.00 | 77.00 | 13.00 | 28.00 | 11.00 | 12.00 | 1.00 | 3.00 | 6.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGG........................................................................................................................................ | 15 | 3 | 64.33 | 64.33 | 42.00 | 1.67 | 12.33 | 2.33 | 1.33 | 0.33 | 2.67 | 0.67 | - | 0.33 | - | - | 0.33 | - | - | 0.33 | - | - | - | - | - | - | - | - |
| ....................................................................................................GGTGGGGAAGGTGGCtcgg................................................................................................................................... | 19 | tcgg | 57.00 | 0.00 | 21.00 | 3.00 | 4.00 | 13.00 | 7.00 | - | 4.00 | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 |
| ....................................................................................................GGTGGGGAAGGTGGCtcg.................................................................................................................................... | 18 | tcg | 37.00 | 0.00 | 21.00 | - | 5.00 | 1.00 | 2.00 | 1.00 | - | - | - | 1.00 | 2.00 | - | - | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCtcgt................................................................................................................................... | 20 | tcgt | 1.00 | 77.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................CAACAGCCCGCCGGTcta................................................................................................................................................................................................... | 18 | cta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................ACGGTGGGGAAGGTGGCtcg.................................................................................................................................... | 20 | tcg | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGt....................................................................................................................................... | 16 | t | 1.00 | 64.33 | - | 0.33 | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCg...................................................................................................................................... | 17 | g | 1.00 | 77.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCgcg.................................................................................................................................... | 19 | gcg | 1.00 | 77.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................AGGGTTGGGTGGATGCtct...................................................... | 19 | tct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCACCCCga................................................................................................................................ | 23 | ga | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................AGGGTTGGGTGGATGCt........................................................ | 17 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCttg.................................................................................................................................... | 19 | ttg | 1.00 | 77.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGGTGGGGAAGGTGGCtagg................................................................................................................................... | 20 | tagg | 1.00 | 77.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................ACGGTGGGGAAGGTGGCtc..................................................................................................................................... | 19 | tc | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................AGGGTTGGGTGGATGCtcta..................................................... | 20 | tcta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................ACGGTGGGGAAGGTGGC....................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................AGGGTTGGGTGGATG.......................................................... | 15 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | 0.10 | - | - | - | - | - | - | - | - | - | - | - |
| CGCAGCCGCCCGGGGCCGAGCTGCCCGCCCCGCCAGCCAACAGCCCGCCGGTAAGACGCAGCCGCGCCCCACATCTTCCTGTCCCGGGGGGCCCTAAGACGGTGGGGAAGGTGGCACCCCTTGCTGCGCAGTGTCCAACACTGGGGATACGTCGCTCTCAGGGGCTCTGTGAGACCCAGGGTTGGGTGGATGCGTCCTCTGTACCGTGGCTTTGGCGGCAGAACTCCACTAGGCCAGTAGGAGAGATTGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR037901(GSM510437) testes_rep2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................CAGTGTCCAACACTattt............................................................................................................ | 18 | attt | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ..................................AGCCAACAGCCCGCCGGTA..................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CACCCCTTGCTGCGCAGTGTCCAACAC............................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..CAGCCGCCCGGGGCCGAGCTGCCCGCCCC........................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................ACCCCTTGCTGCGCAGTGTCCAACAa.............................................................................................................. | 26 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TCGCTCTCAGGGGCTCTG................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................ACCCCTTGCTGCGCAGTGTCCAACAC............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |