| Gene: Asb18 | ID: uc007bzd.1_intron_2_0_chr1_91865296_r.3p | SPECIES: mm9 |
|
|
|
(4) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(11) TESTES |
| GCAATTGCCATTTTCATCCTAAGACTAAGTGCTTATGAAATGTTCCTATTCATTTGGTGACGAGATCGCTCCTCAGTGGGTGGCATTGGCCCTGAAGCTCCAAAGTTCTGGCTTTGGCTGGAGCTCACCCGCCGGTTGCACCGTGGGTGGCAGGTCGCGGCTGGTCCAGTGCCCTGGTGATCGATTTGGCCTCCCCGCAGGTGCGCTCGGGAGCTGCTGGAGCACGGCGCGACAGTCCAGCTGGAGGGTG ..............................................................................................................................................(((((.(((.(((((((((.........)))...))))))......)))..))))).................................................... ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................TGCACCGTGGGTGGCAGGTCGCGGC......................................................................................... | 25 | 1 | 11.00 | 11.00 | - | 2.00 | 5.00 | - | 3.00 | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TCGGGAGCTGCTGGAGCACGGCGCGA.................. | 26 | 1 | 8.00 | 8.00 | 7.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................CGGGAGCTGCTGGAGCACGGCGCGAC................. | 26 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGTGATCGATTTGGCCTCCCCGCA................................................... | 25 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TGCGCTCGGGAGCTGCTGGAGCACGGC...................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGCACCGTGGGTGGCAGGTCGCGGCTGG...................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................................................CAGGTGCGCTCGGGAGCTGCTGGAGC........................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGTGATCGATTTGGCCTCCCCGCAaa................................................. | 27 | aa | 1.00 | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................TAAGTGCTTATGAAATGTTCCTATTC....................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................AGGTGCGCTCGGGAGCTGCTGGAGC........................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGAGCTCACCCGaag.................................................................................................................... | 16 | aag | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGTGATCGATTTGGCCTCCCCGCAGG................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................TGGCAGGTCGCGGCTGGTCCAGTGCCCT........................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGCACCGTGGGTGGCAGGTCGCGG.......................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................TGCACCGTGGGTGGCAGGTCGCGGCTG....................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................CTCGGGAGCTGCTGGAGCACGGCGC.................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TCGGGAGCTGCTGGAGCACGGC...................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGCACCGTGGGTGGCAGGTCGC............................................................................................ | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................CTCGGGAGCTGCTGGAGCACGGCG..................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................................CAGGTGCGCTCGGGAGCTGCTGGA............................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................GTGATCGATTTGGCCTCCCCGCAGGTGCGC............................................ | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................TTCATTTGGTGACGAGATCGCTCCTC................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................TCGGGAGCTGCTGGAGCACGGCGCG................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................TAAGTGCTTATGAAATGTTCCTActc....................................................................................................................................................................................................... | 26 | ctc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................TTCATTTGGTGACGAGATCGCTCCTCA............................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TCCAAAGTTCTGGCTTTGGCTGGAGC.............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TCCAGTGCCCTGGTGATCGATTTGGCCT.......................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCCCCGCAGGTGCGCTCGGGAGC.................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TTGGCCCTGAAGCTCCAAAGTTCTGGC.......................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCCTGGTGATCGATTTGGCCTCCCCGC.................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGATCGATTTGGCCTCCCCGCAGGTGCGC............................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................TGGCTTTGGCTGGAGCTCACCCGCC..................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGTGATCGATTTGGCCTCCCCGC.................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................TGCGCTCGGGAGCTGCTGGAGCACag....................... | 26 | ag | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................TGGCCCTGAAGCTCCAAAGTTCTGGa.......................................................................................................................................... | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| GCAATTGCCATTTTCATCCTAAGACTAAGTGCTTATGAAATGTTCCTATTCATTTGGTGACGAGATCGCTCCTCAGTGGGTGGCATTGGCCCTGAAGCTCCAAAGTTCTGGCTTTGGCTGGAGCTCACCCGCCGGTTGCACCGTGGGTGGCAGGTCGCGGCTGGTCCAGTGCCCTGGTGATCGATTTGGCCTCCCCGCAGGTGCGCTCGGGAGCTGCTGGAGCACGGCGCGACAGTCCAGCTGGAGGGTG ..............................................................................................................................................(((((.(((.(((((((((.........)))...))))))......)))..))))).................................................... ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................CTGCTGGAGCACGGCGCGACAGTCCA........... | 26 | 1 | 8.00 | 8.00 | 3.00 | - | 3.00 | - | 2.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GCTGCTGGAGCACGGCGCGACAGTCCA........... | 27 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - |
| .......CCATTTTCATCCTAAGACTAAGTGCTTA....................................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............CATCCTAAGACTAAGTGCTTATGAAA.................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................GCTCCTCAGTGGGTGGCATTGGCCCTGAA.......................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GCGGCTGGTCCAGTGCCCTGGTGATCGA.................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..........................AAGTGCTTATGAAATGTTCCTATTCA...................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CACGGCGCGACAGTCCAGCTGGAGGGTG | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................GAGCTGCTGGAGCACGGCGCGACAGTCCA........... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................TCATTTGGTGACGAGATCGCTCCTCA............................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................TTCATTTGGTGACGAGATCGCTCCTCA............................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................CTCCAAAGTTCTGGCaaga.......................................................................................................................................... | 19 | aaga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................GGCCCTGAAGCTCCAAAGTTCTGGCT......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |