| Gene: Asb18 | ID: uc007bzd.1_intron_1_0_chr1_91851078_r.5p | SPECIES: mm9 |
|
|
|
(6) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| TGCTACTAAATCACGGATCCCGCTCCGTGTGGCCTGATGCCTTCCCCAAGGTAAGGGGACCCTGAGGTAGCTTGGCTATGCAGAAGCTGGACCTGCCGAGGCCGAGGCTCACAAAGTGAGATGACCCAGGCAGCCGTGGGAGGGTCTGGAGGTGGAGGCTGCGGGTCTTGGGACCCTACTTAGAGGATCGAGGACTTAGAATTCTCCTTGTGGTTAGCCAAAAGAAAAATGAAGAGGCTATACTGTTGAT .........................................................................((((.......))))..((((.((.(((((....(((((...)))))....((((((...)).))))..)))))))))))(((((....(((((((.((.((((....)).)).)).))))))).....)))))........................................... .........................................................................74....................................................................................................................................208........................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATTC.............................................. | 25 | 1 | 22.00 | 22.00 | 9.00 | 8.00 | - | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TACTTAGAGGATCGAGGACTTAGAATT............................................... | 27 | 1 | 16.00 | 16.00 | 5.00 | 7.00 | - | - | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TACTTAGAGGATCGAGGACTTAGAATTC.............................................. | 28 | 1 | 16.00 | 16.00 | 6.00 | 6.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGCAGAAGCTGGACCTGCCGAGGCC................................................................................................................................................... | 25 | 1 | 13.00 | 13.00 | - | - | - | 4.00 | - | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TACTTAGAGGATCGAGGACTTAGAAT................................................ | 26 | 1 | 9.00 | 9.00 | 4.00 | 3.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGCAGAAGCTGGACCTGCCGAGGCCG.................................................................................................................................................. | 26 | 1 | 8.00 | 8.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 |
| ..........................................................................................................................................................................................ATCGAGGACTTAacc................................................. | 15 | acc | 5.00 | 0.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................TACTTAGAGGATCGAGGACTTAGAA................................................. | 25 | 1 | 4.00 | 4.00 | 1.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TAGAGGATCGAGGACTTAGAATTCT............................................. | 25 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATTCT............................................. | 26 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGCAGAAGCTGGACCTGCCGAGGCCGt................................................................................................................................................. | 27 | t | 3.00 | 8.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATT............................................... | 24 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGCAGAAGCTGGACCTGCCGAGG..................................................................................................................................................... | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGGCTATGCAGAAGCTGGACCTGCCGA....................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGGCTATGCAGAAGCTGGACCTGC.......................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGAGGTAGCTTGGCTATGCAGAAGC................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................GAAAAATGAAGAGGCTATACTGTTG.. | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGAGGTAGCTTGGCTATGCAGAAGCTG................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGGCTATGCAGAAGCTGGACCTGCCGAG...................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATTCTCCTT......................................... | 30 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATTCTCC........................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................GAGGATCGAGGACTTAGAATTCTCCTT......................................... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TGCCGAGGCCGAGGCTCACAAAGT..................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................AGCCAAAAGAAAAATagtt................ | 19 | agtt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATTCTC............................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................CAAAAGAAAAATGAAGAaaaa........... | 21 | aaaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................TGCAGAAGCTGGACCTGCCGAGGC.................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CTGGAGGTGGAGGCTGCGGGTCTTGGGA............................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGGGACCCTACTTAGAGGATCGAGGAC....................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TACTTAGAGGATCGAGGACTTAGA.................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATTCTCCT.......................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................GAGGATCGAGGACTTAGAATTCTCCTTGT....................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATTCTCCTa......................................... | 30 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TACTTAGAGGATCGAGGACTTAGAATTat............................................. | 29 | at | 1.00 | 16.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................CCAAGGTAAGGGGACCCTGAGGTAGC................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATcc.............................................. | 25 | cc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TAGAATTCTCCTTGTGGTTAGCCAAAA........................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................CTTAGAGGATCGAGGACTTAGAATTC.............................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................GATCGAGGACTTAacc................................................. | 16 | acc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGCAGAAGCTGGACCTGCCGAGGt.................................................................................................................................................... | 24 | t | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................GCTGGACCTGCCGAGGCCGAGGCTC............................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TAGAGGATCGAGGACTTAGAAa................................................ | 22 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTAGAGGATCGAGGACTTAGAATa............................................... | 24 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................AAGTGAGATGACCCAGGCAGCCGTGGG.............................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGGGACCCTACTTAGAGGATCGAGGACT...................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGCTACTAAATCACGGATCCCGCTCCGTGTGGCCTGATGCCTTCCCCAAGGTAAGGGGACCCTGAGGTAGCTTGGCTATGCAGAAGCTGGACCTGCCGAGGCCGAGGCTCACAAAGTGAGATGACCCAGGCAGCCGTGGGAGGGTCTGGAGGTGGAGGCTGCGGGTCTTGGGACCCTACTTAGAGGATCGAGGACTTAGAATTCTCCTTGTGGTTAGCCAAAAGAAAAATGAAGAGGCTATACTGTTGAT .........................................................................((((.......))))..((((.((.(((((....(((((...)))))....((((((...)).))))..)))))))))))(((((....(((((((.((.((((....)).)).)).))))))).....)))))........................................... .........................................................................74....................................................................................................................................208........................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................GTGGCCTGATGCCTTCCCCAAGGTA..................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TGGACCTGCCGAGGCCGAGGCTCACAaa......................................................................................................................................... | 28 | aa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................GCTGGACCTGCCGAGGCCGAGGCTCACA......................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................GCCGAGGCCGAGGCTCACAAAGTGAGAc................................................................................................................................. | 28 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................GCTCCGTGTGGCCTGATGCCTTCCCCA.......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TGTGGCCTGATGCCTTCCCCAAGGTA..................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TACTTAGAGGATCGAGGACTTAGAA................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TCCGTGTGGCCTGATGCCTTCCCCAAGGTA..................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |