| Gene: Ccdc108 | ID: uc007bnj.1_intron_11_0_chr1_74957129_r | SPECIES: mm9 |
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(2) PIWI.ip |
(1) TDRD1.ip |
(7) TESTES |
| CCGATCGCCTTTCTGTGCTCTTCAAGGTGTCCCATGGACGGGAAATCCTGGTGAGACCTCACACCCTAGTCCTGCTGGACTAGGACATCCAAGAGAGAAGCTAGGAGTGGTGCCCCCTAGGACTCCGGGGCCCGTATCACCGTTGGGTATGCCCGTTCTCAAAGGGCAGCACACCACCCACGGACTCTTTATCTACAGCTACAGTTCATCGGCGTGACGGTGAAGCTGGAGCAGAAGTATGTGCACTT ..................................................................................................((..(((((.((.(((((...((...)))))))))......(((.(((((.(((((.........))))).......)))))))).)))))...))...................................................... ..................................................................................................99.................................................................................................198................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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| ..................................................GTGAGACCTCACACCCTAGTCCTGCTGGACTAGGACATCCAAGAGAGAAGCT.................................................................................................................................................. | 52 | 1 | 64.00 | 64.00 | 64.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCTACAGCTACAGTTCATCGGCGTGACGGT........................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 |
| ...........................................................................TGGACTAGGACATCCAAGAGAGAAGCTAGGAt............................................................................................................................................. | 32 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - |
| ...........................................................................TGGACTAGGACATCCAAGAGAGAAGC................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................................................GTGACGGTGAAGCTGGAGCAGAAGTATG....... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................GGCGTGACGGTGAAGCTGGAGCAGAAGT.......... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................................................GCTGGAGCAGAAGTATGTG..... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - |
| CCGATCGCCTTTCTGTGCTCTTCAAGGTGTCCCATGGACGGGAAATCCTGGTGAGACCTCACACCCTAGTCCTGCTGGACTAGGACATCCAAGAGAGAAGCTAGGAGTGGTGCCCCCTAGGACTCCGGGGCCCGTATCACCGTTGGGTATGCCCGTTCTCAAAGGGCAGCACACCACCCACGGACTCTTTATCTACAGCTACAGTTCATCGGCGTGACGGTGAAGCTGGAGCAGAAGTATGTGCACTT ..................................................................................................((..(((((.((.(((((...((...)))))))))......(((.(((((.(((((.........))))).......)))))))).)))))...))...................................................... ..................................................................................................99.................................................................................................198................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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