| Gene: Als2cr4 | ID: uc007bdd.1_intron_4_0_chr1_59165074_r | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(14) TESTES |
| CCATCTTGGACTACCCGAGATGTGGCACTTTCTGTGCACCGAGCTTTCAGGTGGCTGCCTTTTGTTGGTGTTCGTTAAGCAGATGTTAATTGGATATCATCATTTAAAACCAAAGAAAAAAGCCTTGGTTGTTCTGTACTTTGTAAACAGTTTGACAATTTAAAATGGTATGTAGATTTAGTTTTGTAGACATTCCACTTGTGCTTCTCATAATATGTTAAATTGTATTATATTTGAGGAGATTTTAAAAATACCTTAGCCTTTTATTTTAGTGGCTAATATATAATTAAACTTTTCTCCTTCTTATCTTTGAGTACTTTTCATAATTTATTTATTGACTTTACATACCAATCACAGCACCGCTTCCTCCTGTCCACCCCGTCCTGCCCATATGTCCCTCTCCTGATTACCTGCTCCCTCTCTCCTCAGAGAAGAGTAAGTTCCCACCCCACCCTGGGACCTCCATTCCCACAGTAATTAAACTCTTCTGTGCAGGATGGTCGGTCTGTTCTCTCATGGCTTCTTGGCTGGCTGTGCTGTGTGGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................CTGCCTTTTGTTGGTGTTCGTTAAGCAGATGTTAATTGGATATCATCATTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 52 | 1 | 75.00 | 75.00 | 75.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGGCTGTGCTGTGTGGA | 21 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TTTTGTTGGTGTTCGga..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | ga | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGTTAATTGGATATCATCATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ......TGGACTACCCGAGATGTGGCACTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......TGGACTACCCGAGATGTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....TTGGACTACCCGAGATGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................GGTATGTAGATTTAGTTTTGTAGAC.................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TGTTCGTTAAGttgg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 15 | ttgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...TCTTGGACTACCCGAGATGTGGCACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................CCAAAGAAAAAAGCattt.................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | attt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................TAATATGTTAAATTGTATTATATTTGAGG.................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| CCATCTTGGACTACCCGAGATGTGGCACTTTCTGTGCACCGAGCTTTCAGGTGGCTGCCTTTTGTTGGTGTTCGTTAAGCAGATGTTAATTGGATATCATCATTTAAAACCAAAGAAAAAAGCCTTGGTTGTTCTGTACTTTGTAAACAGTTTGACAATTTAAAATGGTATGTAGATTTAGTTTTGTAGACATTCCACTTGTGCTTCTCATAATATGTTAAATTGTATTATATTTGAGGAGATTTTAAAAATACCTTAGCCTTTTATTTTAGTGGCTAATATATAATTAAACTTTTCTCCTTCTTATCTTTGAGTACTTTTCATAATTTATTTATTGACTTTACATACCAATCACAGCACCGCTTCCTCCTGTCCACCCCGTCCTGCCCATATGTCCCTCTCCTGATTACCTGCTCCCTCTCTCCTCAGAGAAGAGTAAGTTCCCACCCCACCCTGGGACCTCCATTCCCACAGTAATTAAACTCTTCTGTGCAGGATGGTCGGTCTGTTCTCTCATGGCTTCTTGGCTGGCTGTGCTGTGTGGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAGAAGAGTAtaga........................................................................................................... | 18 | taga | 3.00 | 0.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGGTCTGTgatc.................................... | 18 | gatc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCACCCCACCCTaatt.......................................................................................... | 19 | aatt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |