| Gene: Clk1 | ID: uc007bbs.1_intron_5_0_chr1_58471529_r.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(12) TESTES |
| AATGGATCATATCAGGAAGATGGCATATCAAATATGCAAATCTGTAAACTGTAAGTTCTTGATATTTCTTGTAAAATTTGAGTTTGAGACTAATGTCAGACTAATTTGGATCTTTAAAAAAAAGAATCTGGTGGGACTCTAGGGACTCTAGCTCAGTGACAGAAATGAGGCCTTTTTGTTCTGTCCCCATGACTACAGAAGACTAGAAGATGAGATCTACTGTGGGATTTAAAAGCCTAGCCTGAGAGTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................GAATCTGGTGGGACTCTAGGGACTCTAGCTCAGTGACAGAAATGAGGCCTTT........................................................................... | 52 | 1 | 121.00 | 121.00 | 121.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................GTGGGACTCTAGGGACTCTAGC.................................................................................................. | 22 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| .............................................AAACTGTAAGTTCTTGATA.......................................................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGAGATCTACTGTGGGAT...................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................AGAAGATGAGATCTACTGTGGGATTT.................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................GATCTTTAAAAAAAAGctgt.......................................................................................................................... | 20 | ctgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................TCTGGTGGGACTCTAGG........................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................ATGCAAATCTGTAAACT........................................................................................................................................................................................................ | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| AATGGATCATATCAGGAAGATGGCATATCAAATATGCAAATCTGTAAACTGTAAGTTCTTGATATTTCTTGTAAAATTTGAGTTTGAGACTAATGTCAGACTAATTTGGATCTTTAAAAAAAAGAATCTGGTGGGACTCTAGGGACTCTAGCTCAGTGACAGAAATGAGGCCTTTTTGTTCTGTCCCCATGACTACAGAAGACTAGAAGATGAGATCTACTGTGGGATTTAAAAGCCTAGCCTGAGAGTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................GAATCTGGTGGGACTgcca................................................................................................................ | 19 | gcca | 3.00 | 0.00 | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - |
| .......................................................................................................................GAATCTGGTGGGACgcca................................................................................................................. | 18 | gcca | 3.00 | 0.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................GAATCTGGTGGGACTCgcca............................................................................................................... | 20 | gcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................GAATCTGGTGGGAgcca.................................................................................................................. | 17 | gcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |