| Gene: 1700019A02Rik | ID: uc007ayu.1_intron_6_0_chr1_53239389_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| AAACAGGCAAGAAATTGTGAATGGACTGAACATATTTTTGGAAGAAAATGGTATGTTTGCTTAAGTGAATTTACATTTCTTTAAAACTTAAGAACATGTTATTTTTAAAAGAACTGTTCTGTTTTTAACCTGCTTTCGATTCATCTACAGATAGTGAATTCCCGTTGTTTAAAAATCAAAACCACCCCAGGGCTGTAACTGCCAAAGTGACCTCAAGTCGCCATAGCAAATTTATGTCTCTACATAGACA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................AAACTTAAGAACATGTTATTTTTAAAAGAACTGTTCTGTTTTTAACCTGCTT................................................................................................................... | 52 | 1 | 40.00 | 40.00 | 40.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................TGAATGGACTGAACATATTTTTGGAAGA............................................................................................................................................................................................................. | 28 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | - | - | 1.00 | - | 1.00 | - | - | 1.00 |
| ....................ATGGACTGAACATATTTTTGGAAGAAA........................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..............TTGTGAATGGACTGAACATATTTTT................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................ATTCATCTACAGATAGTGAATTCCCGTTGTT................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................ACTGAACATATTTTTGGAAGAAAATG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............TGTGAATGGACTGAACATATTTTTGGAAGA............................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................TGAATGGACTGAACATATTTTTGGAAGAAA........................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............TTGTGAATGGACTGAACATATTTTTGG................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............ATTGTGAATGGACTGAAC........................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................ATTTTTGGAAGAAAATG........................................................................................................................................................................................................ | 17 | 8 | 0.38 | 0.38 | - | 0.38 | - | - | - | - | - | - | - | - | - | - |
| AAACAGGCAAGAAATTGTGAATGGACTGAACATATTTTTGGAAGAAAATGGTATGTTTGCTTAAGTGAATTTACATTTCTTTAAAACTTAAGAACATGTTATTTTTAAAAGAACTGTTCTGTTTTTAACCTGCTTTCGATTCATCTACAGATAGTGAATTCCCGTTGTTTAAAAATCAAAACCACCCCAGGGCTGTAACTGCCAAAGTGACCTCAAGTCGCCATAGCAAATTTATGTCTCTACATAGACA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................TTGCTTAAGTGAATTgatg................................................................................................................................................................................... | 19 | gatg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |