| Gene: Map4k4 | ID: uc007atr.1_intron_12_0_chr1_40054028_f.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| GCTGTGTGCATCATGCCAGTAAGCTAGACTACTTACAGCTTGGAGCCTTGCAAACACCCTCAGCAGCAGGTTGTCTTCACTAAGGAGTCCAGTCCTCGGCGAGCTTGCTGCCGAGCTTCTGGAGTGCCGGTTACCCACACAGGGGACTCAGTCGCGTCCCTCCTGGATGTACTGACTGCTGGGTCATTTCTGTGTGACAGGAGTACATCAGGCGGCAGCTAGAGGAGGAGCAGCGGCACCTGGAGATCCT ....................................................................................................(((((((....)))))))((((....)))).....((((((((.((((((((.((((((.....)))))).......))))))))...))))))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| ......................................................................................................................................CCACACAGGGGACTCAGTCGCGT............................................................................................. | 23 | 1 | 7.00 | 7.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 |
| .....................................................................................................................................CCCACACAGGGGACTCAGTCGCG.............................................................................................. | 23 | 1 | 5.00 | 5.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................................CCACACAGGGGACTCAGTCGCG.............................................................................................. | 22 | 1 | 5.00 | 5.00 | - | - | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGTGACAGGAGTACATCAGGCGGCAGC............................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................ACCCACACAGGGGACTCAGTCGCGTaa........................................................................................... | 27 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................CCCACACAGGGGACTCAGTCGC............................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAGTACATCAGGCGGCAGCTAGAGGA........................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................CACACAGGGGACTCAGTCGCGT............................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................................................................................................................................GTACTGACTGCTGGcata................................................................ | 18 | cata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................CCACACAGGGGACTCAGTCGCGTa............................................................................................ | 24 | a | 1.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TAGAGGAGGAGCAGCGGCACCTGGAG..... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................CCCACACAGGGGACTCAGTCG................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................CCACACAGGGGACTCAGTCGCGa............................................................................................. | 23 | a | 1.00 | 5.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CTGCTGGGTCATTTCTGTGTGA..................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................CCACACAGGGGACTCAGTCG................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCTGTGTGCATCATGCCAGTAAGCTAGACTACTTACAGCTTGGAGCCTTGCAAACACCCTCAGCAGCAGGTTGTCTTCACTAAGGAGTCCAGTCCTCGGCGAGCTTGCTGCCGAGCTTCTGGAGTGCCGGTTACCCACACAGGGGACTCAGTCGCGTCCCTCCTGGATGTACTGACTGCTGGGTCATTTCTGTGTGACAGGAGTACATCAGGCGGCAGCTAGAGGAGGAGCAGCGGCACCTGGAGATCCT ....................................................................................................(((((((....)))))))((((....)))).....((((((((.((((((((.((((((.....)))))).......))))))))...))))))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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