| Gene: Bpag1 | ID: uc007aof.1_intron_6_0_chr1_34173041_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(11) TESTES |
| CGGTATGTGCTCTAGAAGGGAGAGCCCCAGCAGTACCCAGTTTCGGCTTAGATGTGTTTGTCATCTAGAGTGTGGAAGGGAAGGCCGTAGCATCTGGTGACCTGTGTGTTCTTTGTGTCATTTAGCGTTTCCTTTGTAGGCGACGAGAACCCGTGCCTGGTGTGTAATAATCACTGTTTCTCTCTCTCACCTACAAACAGGTGAAGTTGGTGAACATCAGAAATGATGACATAACAGATGGAAATCCTAA .....................................................................................................(((.(((..........))).))).......((((((((.((.((((..(((....))).(((.......)))........)))))).))))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................CTTTGTAGGCGACGAGAACCCG................................................................................................. | 22 | 1 | 4.00 | 4.00 | - | - | 2.00 | - | - | - | 1.00 | - | - | 1.00 | - |
| ....................................................................................................................................TTTGTAGGCGACGAGAACCCGT................................................................................................ | 22 | 1 | 4.00 | 4.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................CTTTGTAGGCGACGAGAACCCGT................................................................................................ | 23 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGt.............................................................................................. | 24 | t | 3.00 | 2.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................TCCTTTGTAGGCGACGAGAACCCGTGC.............................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................TTTGTAGGCGACGAGAACCCGTG............................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - |
| .....................................................................................................................................TTGTAGGCGACGAGAACCCGTGt.............................................................................................. | 23 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................................................................................CTTTGTAGGCGACGAGAACCCGa................................................................................................ | 23 | a | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGTAGGCGACGAGAACCCGTGt.............................................................................................. | 22 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GTAGGCGACGAGAAa.................................................................................................... | 15 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................CTTTGTAGGCGACGAGAACC................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................TCCTTTGTAGGCGACGAGAACC................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................................................................................................TTTGTAGGCGACGAGAACCCGa................................................................................................ | 22 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................CTTTGTAGGCGACGAGAACCC.................................................................................................. | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TTTGTAGGCGACGAGAACCCGTGa.............................................................................................. | 24 | a | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TTTGTAGGCGACGAGAACCCGat............................................................................................... | 23 | at | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................TTTGTAGGCGACGAGAACCCGTtt.............................................................................................. | 24 | tt | 1.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| CGGTATGTGCTCTAGAAGGGAGAGCCCCAGCAGTACCCAGTTTCGGCTTAGATGTGTTTGTCATCTAGAGTGTGGAAGGGAAGGCCGTAGCATCTGGTGACCTGTGTGTTCTTTGTGTCATTTAGCGTTTCCTTTGTAGGCGACGAGAACCCGTGCCTGGTGTGTAATAATCACTGTTTCTCTCTCTCACCTACAAACAGGTGAAGTTGGTGAACATCAGAAATGATGACATAACAGATGGAAATCCTAA .....................................................................................................(((.(((..........))).))).......((((((((.((.((((..(((....))).(((.......)))........)))))).))))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
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| ......................................................................GAAGGGAAGGCCGTaatg.................................................................................................................................................................. | 18 | aatg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |