| Gene: Arfgef1 | ID: uc007ahn.1_intron_24_0_chr1_10174579_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(2) PIWI.mut |
(9) TESTES |
| TTTGAGGTCCTAAAGCAGCAAAAAGAAATAATAGAACAAGGGATTGATTTGTAAGTATTGGATTTGTAAAAGAACTGTTACCGAATATCGCTCAGCCACAGTATCCTAACTCTGTCCCCGGTCTCCCTACATTTCTCATTGTTTTTCATTCCTTATTCTCTTGGATCTAAAAATTGAATGGCTCCATATTTAGTTCTCCCCATTATTGAAAGAGTCTTAATCAGATCCATGAGATGTCCAGCCTATGTTT .........................................................................................................((((..........((.......(((........)))........)).........((((.(((.........))).))))...))))......................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................AAAAGAACTGTTACCGAATATCGCTCAGCCACAGTATCCTAACTCTGTCCCC................................................................................................................................... | 52 | 1 | 238.00 | 238.00 | 238.00 | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTATTGGATTTGTAAAAGAACTGTTACCGAATATCGCTCAGCCACAGT.................................................................................................................................................... | 52 | 1 | 8.00 | 8.00 | - | 8.00 | - | - | - | - | - | - | - |
| ..............................ATAGAACAAGGGATTGATT......................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| .......TCCTAAAGCAGCAAAAAGAAATAATAGAAC..................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 |
| ..............................ATAGAACAAGGGATTGATa......................................................................................................................................................................................................... | 19 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |
| .....................AAAGAAATAATAGAACAAGGGATTca........................................................................................................................................................................................................... | 26 | ca | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - |
| .....................AAAGAAATAATAGAACAAGGGATTGATT......................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ......................AAGAAATAATAGAACAAGGGATTGAT.......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ....................AAAAGAAATAATAGAACAAGGGATTt............................................................................................................................................................................................................ | 26 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - |
| .............................................GATTTGTAAGTATTGG............................................................................................................................................................................................. | 16 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| TTTGAGGTCCTAAAGCAGCAAAAAGAAATAATAGAACAAGGGATTGATTTGTAAGTATTGGATTTGTAAAAGAACTGTTACCGAATATCGCTCAGCCACAGTATCCTAACTCTGTCCCCGGTCTCCCTACATTTCTCATTGTTTTTCATTCCTTATTCTCTTGGATCTAAAAATTGAATGGCTCCATATTTAGTTCTCCCCATTATTGAAAGAGTCTTAATCAGATCCATGAGATGTCCAGCCTATGTTT .........................................................................................................((((..........((.......(((........)))........)).........((((.(((.........))).))))...))))......................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ...........................TAGAACAAGGGATTcaga............................................................................................................................................................................................................. | 18 | caga | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - |