ID: uc009met.10
GENE: Fcho1(17)
chr8:74236414-74236848-


(1)
AGO.mut 		(18)
AGO2.ip 		(6)
B-CELL 		(43)
BRAIN 		(2)
CELL-LINE 		(2)
DCR.mut 		(2)
DGCR8.mut 		(3)
EMBRYO 		(6)
ESC 		(3)
LIVER 		(3)
LYMPH 		(9)
OTHER 		(2)
PIWI.ip 		(7)
SPLEEN 		(6)
TESTES 		(4)
THYMUS 		(1)
TOTAL-RNA

Sense strand
GACACTTCTGGGAAGCCACAGAGACCTCGTTCGGCCCCACGCACTGGCAGGTGGGTCTCACCGGGACATGATGGAGCAGGCAGATGGGCCCCAAGTCCTTGCCTCTAGCTCCCTCACCCTGGCCTAAGGTCCAGCTATTGGACACTTATTAAGTGCCAGCTGTGTACTTGTGCTGTGCTGGCTCTGGGAAGCCTGTAGACAAGGGTCAAAATTCTGGATGCGCGGATGAGTGGGATGTGGCCATGCTGCATAGGCAGGGTCCTGGGGGAAGATGTAACTACTAAACCCGAAAGGCCTAGGATTTGCGGGTGAAGTCACGCGCTGGGAACAGGAACAGCCTGTGGGAAGGTAGCAAGCTCGAACTCGCTCCTGTCGCTGTTCCCAGTTGCGCAGAGAAGCCCCTGGCCTCGGAGGAGCCACTATCCAAGAGCCTCT
.............................................................................................................................................................................................................................................................................................................................((((((((((((((..((((...(((((..(((.....)))....)))))..))))..))))))))))).))).............................................
.............................................................................................................................................................................................................................................................................................................................318........................................................................393........................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR206941(GSM723282)
other. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206942(GSM723283)
other. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT2()
Testes Data. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM475281(GSM475281)
total RNA. (testes)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		mjTestesWT3()
Testes Data. (testes)
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGG...........................................................................................22145.0045.004.002.00-3.006.00-4.002.003.001.005.00---1.00----2.001.00--1.00-1.00-------1.00------------1.00-----2.001.00--------------1.00------1.00------1.00--------1.00-
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTTT..............................................22134.004.004.008.002.001.001.00--2.00-1.00-2.00------2.00-2.00-1.00----1.002.001.00-----1.001.00-------1.00------------1.00-----------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CGCTCCTGTCGCTGTTCCCAGT.................................................22118.0018.002.002.002.001.00-----2.00---2.00---1.00-------1.00-1.001.00-----1.00-------------------------------1.00--------------------1.00-----
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGGG..........................................................................................23115.0015.002.00-----2.00-------------1.004.00--1.00-3.00-------------------1.00-------------------------1.00--------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTT...............................................21114.004.003.00--1.00-3.001.001.001.00--1.001.001.00------------------------------1.00------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGTT................................................22112.0012.002.001.002.001.001.001.001.00--1.00---------------------1.00----------------------------------------------1.00--------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTTTT.............................................2318.004.00---1.00---2.00---1.001.00-1.00-----------------------1.00------------------------------------------1.00-----------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTG............................................................................................2115.005.00-2.00-------------------------------1.00---------------------1.00---------------------1.00---------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGTTT...............................................2315.0012.002.00-3.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTAT..............................................2214.004.00-1.00--1.00---1.00---1.00--------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGATTT..............................................224.000.00--1.00------1.00----1.00----------------------------------------------------------------1.00-------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTT................................................2014.004.00---1.00----1.00--2.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGT.............................................................................................2014.004.00-----------1.00-2.00----------------------------------------------------------------------------1.00--
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGA.................................................194.000.00------------1.00----------------1.00---------1.00-1.00---------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGATT...............................................214.000.002.00--------------1.00---------------------1.00-------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CGCTCCTGTCGCTGTTCCCAGTTT...............................................2414.003.001.00--------------3.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCA...................................................1713.003.00----------------------3.00----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................TCGCTCCTGTCGCTGTTCCCAGT.................................................2313.003.001.00-------1.00---------------1.00--------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTTA..............................................2213.004.00-1.00---1.00----1.00----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCTTT.................................................213.000.001.00------------------1.00----------------------1.00--------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAATT..............................................223.000.001.00----1.00--------1.00------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CGCTCCTGTCGCTGTTCCCAGTT................................................2313.003.001.00--------1.001.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAAT...............................................212.000.00--1.00----------------------------1.00-------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAAGA..............................................222.000.00--------------1.00------------------------------------------------1.00-----------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCATTT................................................222.000.00--1.00---------------------------------1.00--------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTATA..............................................222.000.00-----2.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTATT..............................................222.000.00-1.00-1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAA................................................202.000.00---------------------------------------------1.00-------------------------------------1.00---------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAAA...............................................212.000.001.00------------------------------------------------------------------1.00-------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTCTT.............................................2312.004.00-----1.00-1.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTCT..............................................2212.004.001.00----------------------1.00---------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGGGT.........................................................................................2412.0015.00----1.00--------------------------------------------------------------------------------1.00-------
...........................................................................................................................................................................................................................................................................................................................................................................TCGCTCCTGTCGCTGTTCCCAGA.................................................232.000.00------1.00-----------------------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................CAGGAACAGCCTGTGGGAAGGTAGCAAGCT.............................................................................3012.002.00--------------------------------------------------2.00------------------------------------------
........TGGGAAGCCACAGAGACCTCGTTCGG.................................................................................................................................................................................................................................................................................................................................................................................................................2612.002.00---------------------------------------------------1.00-----------------1.00-----------------------
.................................................................................................................................................................................................................................................................................................................................CTGGGAACAGGAACAGCCTGTGG...........................................................................................2312.002.00--------1.00-----------------------------1.00------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGA...........................................................................................2212.005.00--1.00---------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGT.................................................2112.002.00-----------1.00------------------------------------------------------------------------1.00--------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGGGA.........................................................................................2411.001.00--------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGTCA...............................................2311.002.00--------------------------------------------------------------------------------------1.00------
.........................................................................................................................................................................................................................................................................................................................................................AAGGTAGCAAGCTCGAACTCGCT...................................................................2311.001.00-----------------------------------1.00---------------------------------------------------------
........TGGGAAGCCACAGAGACCTCGTTCGGC................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------------------------------------------------------------------------1.00------------
..................................................................................................................................................................................................GTAGACAAGGGTCAAAATTCTGGATG.......................................................................................................................................................................................................................2611.001.00----------------------------------1.00----------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................CTGGGAACAGGAACAGCCTGTGGG..........................................................................................2411.001.001.00--------------------------------------------------------------------------------------------
........TGGGAAGCCACAGAGACCTCGTTCGGCCC..............................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................................................................................................................................................................................................TGAAGTCACGCGCTGAACG...........................................................................................................191.000.00----------------1.00----------------------------------------------------------------------------
.....................................................................................................................................................TAAGTGCCAGCTGTGTACCT..........................................................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------1.00---------------------------------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGGA..........................................................................................2311.0045.00------------------------------------------1.00--------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTTTTA............................................2411.004.00------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................AAGCCCCTGGCCTCGGAGGAG...................2111.001.00----------------------------------------------------------1.00----------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................TCGCTCCTGTCGCTGTTCCCCGT.................................................231.000.00------------------------1.00--------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTA...............................................2111.004.00-------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAA..................................................201.000.00-----------------------------------------------------------------------1.00---------------------
........................................................................................................................................................................................................................................................................................................................................CAGGAACAGCCTGTGGGAAGGTTT...................................................................................241.000.001.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGTG................................................2211.002.00-----1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGCCCCTGGCCTCGGAGGAGCCA................2711.001.00-----------------------------------------------1.00---------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTTAA.............................................2311.004.00-------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TGGGAAGGTAGCAAGTACT...........................................................................191.000.00----------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAAGT..............................................221.000.00---------------------------------------1.00-----------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACTATCCAAGACTG...181.000.00-----------------------------------------------------------------------------------------1.00---
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGACTT..............................................221.000.00---------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTCTT..............................................221.000.001.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGTCT...............................................2311.002.00---1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGTTA...............................................2311.0012.00-1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................CTAGGATTTGCGGGTATT..........................................................................................................................181.000.00--------------------------------------------------------------------------1.00------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCAGTC................................................2211.002.00---------------------------------1.00-----------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGT...........................................................................................2211.005.00---1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGAAGTCACGCGCTGGAGG...........................................................................................................191.000.00-------------------------------------------------------------1.00-------------------------------
...................................................................................................................................................................................................................................................................................................................................GGGAACAGGAACAGCCTGTGGG..........................................................................................2211.001.00-----------------1.00---------------------------------------------------------------------------
.......................................................................TGGAGCAGGCAGATGCCCC.........................................................................................................................................................................................................................................................................................................................................................191.000.00----------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGATTA..............................................221.000.00---------------------------------------------1.00-----------------------------------------------
.....TTCTGGGAAGCCACAGAGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00---------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CACGCGCTGGGAACACCA......................................................................................................181.000.00------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCATTC................................................221.000.00-------------------------1.00-------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAT................................................201.000.00-----------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CACGCGCTGGGAACACA.......................................................................................................171.000.00------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCTTTT................................................221.000.00----------------------------------1.00----------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................AGGAACAGCCTGTGGAGAC.......................................................................................191.000.00----------------------------------------1.00----------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CGCTCCTGTCGCTGTTCCCAGA.................................................221.000.00-------------------1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTGA...............................................211.000.00------------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAGA...............................................211.000.00-------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGAAGTCACGCGCTGGAGGC..........................................................................................................201.000.00----------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAAAT..............................................221.000.00-----------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTATCCAAGAGTGA..181.000.00----------------------------------------------------------------------1.00----------------------
.................................................................................................................................................................................................................................................................................................................................CTGGGAACAGGAACAGCCTGTGGGT.........................................................................................2511.001.00-----------------------------------------------------1.00---------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTATT.............................................2311.004.00-------------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CGCTCCTGTCGCTGTTCCCCGT.................................................221.000.00---------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TGGGAAGGTAGCAAGTATA...........................................................................191.000.00-------------------------------------------------1.00-------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCCCTGGCCTCGGAGGAGCA.................251.000.00-----------------1.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................GAAGTCACGCGCTGGCAGC..........................................................................................................191.000.00----------------------------------------1.00----------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CGCTCCTGTCGCTGTTCCCAGAAT...............................................241.000.00--------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTCGCTGTTCCCACTC................................................221.000.00-----------------------------------------------------------------1.00---------------------------
...........................................................ACCGGGACATGATGGAGCAG....................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------1.00-------------------
..............................................................................................................................................................................................................CAAAATTCTGGATGCGCGGA.................................................................................................................................................................................................................2011.001.00------------------------------------------------1.00--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGCTAT..............................................221.000.00---1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGTTC...............................................2111.004.00------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TGGGAACAGGAACAGCCTGTGGT..........................................................................................2311.0045.00------1.00--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................CTGGGAACAGGAACAGCCTGTGGGA.........................................................................................2511.001.00----------------------------------------------------------------------------------------1.00----
...............................................................................................................................................................................................................................................................................................................................CGCTGGGAACAGGAACAGCCTGTGGG..........................................................................................2611.001.001.00--------------------------------------------------------------------------------------------
........................................GCACTGGCAGGTGGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------1.00--------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CTCCTGTCGCTGTTCCCAGTTAT..............................................231.000.00---------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGACC...............................................211.000.00-------------------------------------------1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................................................GCTGGGAACAGGAACAGCCTGTGG...........................................................................................2411.001.001.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CCTGTCGCTGTTCCCAGTTTT..............................................211.000.00-----------------1.00---------------------------------------------------------------------------
........TGGGAAGCCACAGAGACCTCGTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CGCTGGGAACAGGAACAGCCTGTGGGAAGGTAGC..................................................................................3411.001.00----1.00----------------------------------------------------------------------------------------
.........GGGAAGCCACAGAGACCTCG......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------1.00------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CGCTCCTGTCGCTGTTCCCA...................................................2011.001.00-----------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TGGGAAGGTAGCAAGTACA...........................................................................191.000.00----------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCCTGTCGCTGTTCCCAGAAAA..............................................221.000.00-------------------------------------1.00-------------------------------------------------------
......................................................................................................................................................................................................................................................................TGGGGGAAGATGTAAC.............................................................................................................................................................1620.500.50-------0.50-------------------------------------------------------------------------------------
............................................................................................................................................................................CTGTGCTGGCTCTGGGA......................................................................................................................................................................................................................................................1730.330.33--------------------------------------------------------------------------------------------0.33

Antisense strand
GACACTTCTGGGAAGCCACAGAGACCTCGTTCGGCCCCACGCACTGGCAGGTGGGTCTCACCGGGACATGATGGAGCAGGCAGATGGGCCCCAAGTCCTTGCCTCTAGCTCCCTCACCCTGGCCTAAGGTCCAGCTATTGGACACTTATTAAGTGCCAGCTGTGTACTTGTGCTGTGCTGGCTCTGGGAAGCCTGTAGACAAGGGTCAAAATTCTGGATGCGCGGATGAGTGGGATGTGGCCATGCTGCATAGGCAGGGTCCTGGGGGAAGATGTAACTACTAAACCCGAAAGGCCTAGGATTTGCGGGTGAAGTCACGCGCTGGGAACAGGAACAGCCTGTGGGAAGGTAGCAAGCTCGAACTCGCTCCTGTCGCTGTTCCCAGTTGCGCAGAGAAGCCCCTGGCCTCGGAGGAGCCACTATCCAAGAGCCTCT
.............................................................................................................................................................................................................................................................................................................................((((((((((((((..((((...(((((..(((.....)))....)))))..))))..))))))))))).))).............................................
.............................................................................................................................................................................................................................................................................................................................318........................................................................393........................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR206941(GSM723282)
other. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206942(GSM723283)
other. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT2()
Testes Data. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM475281(GSM475281)
total RNA. (testes)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		mjTestesWT3()
Testes Data. (testes)
.....................................................................GATGGAGCAGGCAGATGC............................................................................................................................................................................................................................................................................................................................................................ 183.000.00--------------------------------3.00------------------------------------------------------------
.....................................................................................................CCTCTAGCTCCCTCATAT............................................................................................................................................................................................................................................................................................................................ 181.000.00----------------------------------------------------------------1.00----------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................TCCCAGTTGCGCAGAGGCA..................................... 191.000.00--------------------------------------------------------------1.00------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGGAGGAGCCACGCCC........... 191.000.00-----------------------------1.00---------------------------------------------------------------
......................................................................................GGCCCCAAGTCCTTGATGG.......................................................................................................................................................................................................................................................................................................................................... 191.000.00---------------------------------------------------1.00-----------------------------------------
..................................................GTGGGTCTCACCGGGAGGGT............................................................................................................................................................................................................................................................................................................................................................................. 201.000.00-------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................................................................................GGATGCGCGGATGAGTCTC......................................................................................................................................................................................................... 191.000.00----------------------------------------------------------------------------1.00----------------
......................................................................................................................................................................CTTGTGCTGTGCTGGCTCCTC........................................................................................................................................................................................................................................................ 211.000.00------------------------------------------------1.00--------------------------------------------
........................................................................................................................................................................................................................GATGCGCGGATGA.............................................................................................................................................................................................................. 1350.200.20------------------------------------------------------0.20--------------------------------------