ID: uc009kqs.2
GENE: Oraov1(2)
chr7:152104929-152105178+


(4)
AGO1.ip
(11)
AGO2.ip
(2)
AGO3.ip
(10)
B-CELL
(27)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(8)
EMBRYO
(11)
ESC
(5)
FIBROBLAST
(3)
HEART
(3)
LIVER
(1)
LUNG
(4)
LYMPH
(15)
OTHER
(5)
OTHER.mut
(2)
PANCREAS
(3)
PIWI.ip
(1)
PIWI.mut
(4)
SKIN
(7)
SPLEEN
(1)
TDRD1.ip
(15)
TESTES
(2)
THYMUS
(2)
UTERUS

Sense strand
CAGCTGGGCCTGGCTGCCATCCTTTCTGTAGAGCTCCCCTTAGGTGGAGGAAGAGCCATTAGTGAGGGTTGCTCTGCAGCAGGTGGTGGCTAGCCCTGCCTAGAACAGGGGGATGTGCTTGGTCTGCCCGCTGCCCTGAAGATGCAGTGGTGTGGGGCCTGGAGTCTCCTGGGTGACAGCCCTGCCCCCATGCATCTCAGCAGGAAGATGAAGGTGGTGGAGGCTCTGATTGCGCTGCTGCAGGACTTTC
.......................................................................................................................................(((.(((((((..((.((((((.(((..(((.....)))..))))))))).))..))))))))))..................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR206941(GSM723282)
other. (brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR206939(GSM723280)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR073954(GSM629280)
total RNA. (blood)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR014231(GSM319955)
16.5 dpc total. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
........................................................................................................................................TGAAGATGCAGTGGTGTGG...............................................................................................19115.0015.00--3.001.00-1.00----2.00----1.00-----2.00---------------------1.00----1.00------------------1.00------1.00----------------------------------------1.00------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGG...............................................................................................21110.0010.00--1.00---2.001.00--1.00--------1.00-----1.00----------1.00-----------------------1.00----------------------------1.00--------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCCT..........................................................................................24110.0010.007.00-----------1.00----1.00--------1.00-----------------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGG.............................................................................................2118.008.00----2.00-------1.00-----------------1.00---2.00------------1.00-------------------------1.00------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGG..............................................................................................2218.008.00--1.00--1.00---1.00---------------------2.00-------------------1.00------------------------------1.00-------1.00-------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGG..............................................................................................2017.007.003.00----1.00--1.00--------------------------1.00--1.00-----------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGC............................................................................................2216.006.00-4.00---1.00-----------------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTG.........................................................................................2316.006.00--1.003.00-----------------------------------------------------------------------------1.00----------------------1.00-----------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGA.............................................................................................2115.007.00------1.002.00--------------------------------------------------------1.00------------------1.00--------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCTT..........................................................................................2315.002.00-5.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCT..........................................................................................2215.005.00----------------1.00-----------2.00---------------1.00------1.00----------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCAA..........................................................................................2413.006.00----1.00-----------1.00--------------------------1.00------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCC...........................................................................................2113.003.00------------------------------------------------------------------------------1.001.00-------------------1.00----------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTAT........................................................................................2413.005.00----------------------------------------------1.00------------------------------------------------1.00------------1.00-------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGG.............................................................................................1912.002.00---------------------------------------------------------------------------------------------1.00---1.00------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTAA........................................................................................2412.005.00------------------------1.00--------1.00----------------------------------------------------------------------------------------
...........................................................................................................................................AGATGCAGTGGTGTGGGGCCTG.........................................................................................2212.002.00---1.00-----------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................CTGAAGATGCAGTGGTGTG................................................................................................1912.002.00-----1.00---------------------------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGG.............................................................................................2012.002.00-----------------------1.00---------------------------------------------------------------------------------------1.00----------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGC............................................................................................2012.002.00---------1.00------------------------------------------------------------------------------------------1.00---------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGC............................................................................................2112.002.00---------1.00--------------------------------------------------------------------------1.00-------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTG................................................................................................2012.002.00------1.00----------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCCTGAAGATGCAGTGGTGT.................................................................................................2012.002.00--------------1.00----1.00------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCCTGAAGATGCAGTGGTGTGGGGC............................................................................................2512.002.00----------------------1.00--------------------------1.00------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCCT..........................................................................................2312.002.00------------------------------------------2.00-------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCC...........................................................................................2212.002.00-----------1.00---------------------------------------------------1.00----------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCC...........................................................................................2312.002.00--------1.00-----------------------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................AGATGCAGTGGTGTGGGGCCT..........................................................................................2112.002.00--------------------------------------------------1.00--------------1.00--------------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGT.................................................................................................1912.002.00-------------1.00------------------------------------------------------------------------------------------------------1.00-----
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCCTT.........................................................................................2412.002.00--------------------------------2.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................CAGCCCTGCCCCCATGCATCTC....................................................2212.002.00----------1.00------------------------------------1.00--------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTATAT......................................................................................2612.005.00-------------1.00--------------------------------------1.00---------------------------------------------------------------------
................................................................................................................................................................................................................................TCTGATTGCGCTGCTGCAGGACTTTC2612.002.00---------------------------------------------1.00----------------------1.00-----------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTTT........................................................................................2412.005.00---------------------------------------1.00----------------------------------------1.00-----------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGT............................................................................................2212.008.00--1.00-------------------------------------------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................................................ATGAAGGTGGTGGAGGCTC........................1912.002.00-----------------------------1.00----------------------------1.00---------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCCAAT........................................................................................2612.002.00--------1.00---------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGAAA...........................................................................................2312.007.00------------2.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GGAAGATGAAGGTGGTGGA.............................1941.751.75-------------------------------------------------------1.75------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTG................................................................................................1821.501.50------------------------0.50--------------------------------0.50--------------------------------------------------------------0.50-
.....................................................................................................................................................................................................CAGCAGGAAGATGAATCC...................................181.000.00--------------------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCCAT.........................................................................................2411.002.00--------------------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCATAT.......................................................................................2511.003.00--------------------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTAGA.......................................................................................2511.005.00------------------------------------------------1.00-------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCATTT........................................................................................2611.006.00----1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCCTTT........................................................................................2511.002.00-----------------------------------------------------------------------------------------------------------------1.00--------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCG...........................................................................................2111.002.00---------------------------------1.00----------------------------------------------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGAAA............................................................................................2411.0010.00------------------------------------------------------------------------1.00-------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGAA............................................................................................2411.008.00------------------------------------------------------1.00-------------------------------------------------------------------
................................................................................................................................................................................................................TGAAGGTGGTGGAGGCTCT.......................1911.001.00--------------------------------------------1.00-----------------------------------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGGCCAA.........................................................................................2711.001.00----------------------------------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGAAA............................................................................................2111.001.00-------------------------------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTGAT.......................................................................................2511.006.00----------------------------------------------------------------------1.00---------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCCTG.........................................................................................2511.001.00------------------1.00-------------------------------------------------------------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGT..............................................................................................2211.0010.00-----1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................AGCAGGTGGTGGCTAGCTC..........................................................................................................................................................191.000.00---------------------------1.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCAGGAAGATGAAGGTGGTGGAGGCTC........................2711.001.00-----------------------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCCA..........................................................................................2311.002.00----------------------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTGCCCCCATGCATCTCAGA.................................................211.000.00--------------------------------------------------------------------------------------------------------------1.00-----------
..........................................................................................................AGGGGGATGTGCTTGTTAA.............................................................................................................................191.000.00-----------------------------------------------------------------------------------------------------1.00--------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCATA.........................................................................................2511.006.00-------------------------------------------------1.00------------------------------------------------------------------------
.......................................................................................................................................CTGAAGATGCAGTGGTGTGG...............................................................................................2011.001.00------------------------------------------------------1.00-------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGTTAT.........................................................................................2511.008.00---------------------------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................TGCAGTGGTGTGGGGCCTA.........................................................................................191.000.00----------------------1.00---------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGATT..........................................................................................2211.002.00-----------------------------------------------------------------------------1.00--------------------------------------------
...........................................................................................................................................................................................................................GAGGCTCTGATTGCGC...............1611.001.00--------------------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCCTGCCCCCATGCATCTCAGA.................................................221.000.00---------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGAAA...........................................................................................221.000.00---------------------------------------------------------------------------------------1.00----------------------------------
................................................................................................................................................................................................................................TCTGATTGCGCTGCTGC.........1711.001.00-------------------------------------------------------------------------------------------------------1.00------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGGT............................................................................................241.000.00------------------------------------------------------------------------------------------------------1.00-------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTTTT.......................................................................................2511.005.00---1.00----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................CTGAAGATGCAGTGGTGTGGG..............................................................................................2111.001.00--------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CTGATTGCGCTGCTGT.........161.000.00-------------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCAAT.........................................................................................2411.002.00----------------------------------------------1.00---------------------------------------------------------------------------
................................................................................................................................................CAGTGGTGTGGGGCCTGT........................................................................................181.000.00-----------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCCAT.........................................................................................2511.002.00--------------------------------------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTTAT.......................................................................................2511.005.00-----------------------------------------------------------1.00--------------------------------------------------------------
.....................................................................................................................................CCCTGAAGATGCAGTGGTGTGGGGCCT..........................................................................................2711.001.00-----------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGTT.............................................................................................2111.0015.00-----------------------------------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGATT..........................................................................................2311.002.00----------------------------------------------------------------------------------------------------------------1.00---------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCCA..........................................................................................2411.002.00----1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGGCAT..........................................................................................2611.001.00----------------------------------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................................................TGACAGCCCTGCCCCCATGCATCTCAGAAG...............................................301.000.00------------------------------------------------------------------1.00-------------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGGATA..........................................................................................261.000.00----------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGGCTA.........................................................................................2411.002.00--------------------------------------------------------------------------------------1.00-----------------------------------
....................................................................................................................................................................................CCTGCCCCCATGCATCTCAGT.................................................211.000.00-------------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCGAT.........................................................................................2411.002.00----------------------------------------------------------------------------1.00---------------------------------------------
...........................................................................................................................................AGATGCAGTGGTGTGGGGCCA..........................................................................................211.000.00----1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGAAGGTGGTGGAGGCTC........................1811.001.00-----------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTGCCCCCATGCATCTCAGC.................................................2111.001.00--------------------------------------1.00-----------------------------------------------------------------------------------
..............................................GAGGAAGAGCCATTAGCG..........................................................................................................................................................................................181.000.00-------------------------------------1.00------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGAT.............................................................................................2111.0015.00-----------------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................................................................................................TGAAGGTGGTGGAGGCTCTGATTGA.................251.000.00-----------------------------------------------------------------------1.00--------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGA.............................................................................................2311.008.00-------------------------------------------------------------------------------------------------------------1.00------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCAA..........................................................................................2211.002.00------------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTT.........................................................................................2311.005.00-----------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTA................................................................................................181.000.00------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTGAA.......................................................................................2511.006.00---------------------------------------------------------------------1.00----------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCA..........................................................................................2211.003.00-----------------------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGA..............................................................................................1911.001.00------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGG...............................................................................................1811.001.00--------------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCATT........................................................................................2411.003.00-----------------------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................CTGAAGATGCAGTGGTGTGGGGA............................................................................................231.000.00---------------------------------------------------------------------------1.00----------------------------------------------
...........................................................................................................................................AGATGCAGTGGTGTGGGGCCTGTA.......................................................................................2411.002.00---------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGATGCAGTGGTGTGGGATA...........................................................................................201.000.00--------------1.00-----------------------------------------------------------------------------------------------------------
..........................................................TTAGTGAGGGTTGCTCTGCAGCAGGTG.....................................................................................................................................................................2711.001.00---------------------------------------------1.00----------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGAT............................................................................................2211.007.00-----------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTAG...............................................................................................191.000.00---------------------------------------------------------------------------------------------------------1.00----------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGA..............................................................................................2011.0015.00-------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CCCTGAAGATGCAGTGGTGTG................................................................................................2111.001.00----------------------------------------------------------------------------------------------1.00---------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCCTGA........................................................................................251.000.00---1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTGA........................................................................................2411.006.00----------------------------------------1.00---------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTTTAT......................................................................................2611.005.00--------------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................................GTGTGGGGCCTGGAGTCTCCTGG..............................................................................2311.001.00-----------------------------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................AGATGCAGTGGTGTGGGGCCTAAAT......................................................................................2511.002.00-------------------------------------------------------------------------------------------1.00------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGGCC...........................................................................................2511.001.00--------------------------------------------------------------------------------------------------1.00-----------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCG...........................................................................................2311.006.00-----------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTGTAG......................................................................................2611.006.00------------------------------------------------------------------------------------------------------------------1.00-------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGGC............................................................................................2411.001.00----------------------------------------------------1.00---------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGTAT............................................................................................2211.0015.00------------------------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................................TGAAGATGCAGTGGTGTGGGGCCTAT........................................................................................2611.0010.00------------------------------------------------------------------------------------------------1.00-------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTGAAT......................................................................................2611.006.00---------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................CCTGAAGATGCAGTGGTGTGGGT.............................................................................................2311.008.00-------------------1.00------------------------------------------------------------------------------------------------------
......................................................................................................................TTGGTCTGCCCGCTGCCCTGAAGATGC.........................................................................................................2711.001.00------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTGGGA.............................................................................................1920.500.50----0.50---------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................GCGCTGCTGCAGGACT...1620.500.50-----------------------------------------------------------------------------------------------------------------------0.50--
..........................................................................................................................................AAGATGCAGTGGTGTGGG..............................................................................................1820.500.50--------------------------------------------------------0.50-----------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGTG................................................................................................1730.330.33----------------------------------------------------------0.33---------------------------------------------------------------
.........................................................................................................................................GAAGATGCAGTGGTGT.................................................................................................1640.250.25-------------------------0.25------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGATGCAGTGGTGTG................................................................................................1680.120.12-------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
CAGCTGGGCCTGGCTGCCATCCTTTCTGTAGAGCTCCCCTTAGGTGGAGGAAGAGCCATTAGTGAGGGTTGCTCTGCAGCAGGTGGTGGCTAGCCCTGCCTAGAACAGGGGGATGTGCTTGGTCTGCCCGCTGCCCTGAAGATGCAGTGGTGTGGGGCCTGGAGTCTCCTGGGTGACAGCCCTGCCCCCATGCATCTCAGCAGGAAGATGAAGGTGGTGGAGGCTCTGATTGCGCTGCTGCAGGACTTTC
.......................................................................................................................................(((.(((((((..((.((((((.(((..(((.....)))..))))))))).))..))))))))))..................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR206941(GSM723282)
other. (brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR206939(GSM723280)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR073954(GSM629280)
total RNA. (blood)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR014231(GSM319955)
16.5 dpc total. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
..........................................................................................................................................AAGATGCAGTGGTGTGGGGCCTG......................................................................................... 2312.002.00-------------------------------------------------------------------------------------1.00-------------------------------1.00----
.........................................................................................................................................GAAGATGCAGTGGTGTGGGGCC........................................................................................... 2211.001.00----------------------------------------------------------------------------------------------------------------------1.00---
........CCTGGCTGCCATCCTTTGCT.............................................................................................................................................................................................................................. 201.000.00---------------1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ACAGCCCTGCCCCCATATA........................................................ 191.000.00-------------------------------------------------------------1.00------------------------------------------------------------
...................................................................GTTGCTCTGCAGCAGGG...................................................................................................................................................................... 171.000.00--------------------1.00-----------------------------------------------------------------------------------------------------