ID: uc009jko.10
GENE: 9030624J02Rik(10)
chr7:125918606-125918855+


(5)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(11)
BRAIN 		(1)
DGCR8.mut 		(6)
EMBRYO 		(5)
ESC 		(1)
FIBROBLAST 		(1)
KIDNEY 		(1)
LIVER 		(3)
LYMPH 		(14)
OTHER 		(1)
OTHER.mut 		(1)
PIWI.ip 		(1)
SKIN 		(4)
SPLEEN 		(5)
TESTES 		(3)
TOTAL-RNA

Sense strand
GATAGGGATATGTATGGGGAAGCCTTACTAAATTGTACCCACAGGGAAAGTCTGGCTACACTGCCTTGGCAAGCTGAAACTTTGACCTTGATTTGTTCTTAGGCGTTTGATTCCCTCCCCTACATCTAGGATAATACGGTTTTATCATGGAAGTGAGGACAGGGAGAATGTAACTAACTCTGCACTCCTCTCTCCCACAGGGGGATTTCAGAGTGCCTGCCCCGACTAACCTGCATGATCAGAGGGATCG
........................................................................................................................................................(((.(((.((((((..((((........)))))))).)).))))))....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR206942(GSM723283)
other. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR073954(GSM629280)
total RNA. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206940(GSM723281)
other. (brain)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
.................................................................................................................................................CATGGAAGTGAGGACAGGGAG....................................................................................21121.0021.00-2.00-1.003.00-3.001.001.00--1.001.00-2.00---------1.001.00--1.00------------1.00-------------1.001.00-----
................................................................................................................................................TCATGGAAGTGAGGACAGGGAG....................................................................................2216.006.001.001.00-----2.00-------1.00--1.00-------------------------------------------
..................................................................................................................................................ATGGAAGTGAGGACAGGGAG....................................................................................2015.005.00-1.00--------1.00------------------1.00--1.00---------1.00-------------------
...............................................................................................................................................ATCATGGAAGTGAGGACAGGGAG....................................................................................2314.004.00---3.00----------------------1.00-----------------------------------
.................................................................................................................................................CATGGAAGTGAGGACAGGG......................................................................................1913.003.00---------1.001.00----------------------------------------------1.00----
.................................................................................................................................................CATGGAAGTGAGGACAGG.......................................................................................1813.003.001.00--------1.00------1.00---------------------------------------------
................................................................................................................................................TCATGGAAGTGAGGACAGGGAGAATA................................................................................263.000.00----------------------1.00----------1.00------1.00---------------------
.................................................................................................................................................CATGGAAGTGAGGACAGGGA.....................................................................................2013.003.002.00-1.00-----------------------------------------------------------
..................................................................................................................................................................................TCTGCACTCCTCTCTCCCACAG..................................................2212.002.00--1.00----------1.00------------------------------------------------
..................................................................................................................................................ATGGAAGTGAGGACAGGGAGT...................................................................................2112.005.00--------1.00------------------------------------1.00----------------
..................................................................................................................................................................................TCTGCACTCCTCTCTCCCACAGT.................................................2312.002.00--------------------------------------------1.00-----1.00-----------
.................................................................................................................................................CATGGAAGTGAGGACAGGGAA....................................................................................2111.003.00-----------1.00--------------------------------------------------
..................................................................TGGCAAGCTGAAACTTAAAG....................................................................................................................................................................201.000.00---------------------1.00----------------------------------------
..............................................................................................................TTCCCTCCCCTACATCTAGGATAATACGGTTTTATCATGGAAGTGAGGACAGGGAGAATGTAACTAACTCTGCACTCCTCTCTCCCACAGAG................................................921.000.00-----------------------------------------------1.00--------------
.........................................................................................................................................................................GTAACTAACTCTGCACTCCTC............................................................2111.001.00-----1.00--------------------------------------------------------
...............................................................................................................................................................................................................................GACTAACCTGCATGATCAGAGGGATCG2711.001.00--1.00-----------------------------------------------------------
.................................................................................................................................................CATGGAAGTGAGGACAGGGATA...................................................................................2211.003.001.00-------------------------------------------------------------
..................................................................................................................................................ATGGAAGTGAGGACAGGGAGA...................................................................................2111.001.00----------------------------------------------1.00---------------
..............................................................................................................................................................................................................TTCAGAGTGCCTGCCCCGACTAACCT..................2611.001.00----------------------------------------------------1.00---------
....................................................................................................................................................GGAAGTGAGGACAGGGAGAA..................................................................................2011.001.00-------------------1.00------------------------------------------
..................................................................................................................................................ATGGAAGTGAGGACAGGGCT....................................................................................201.000.00-----------------1.00--------------------------------------------
.......................................................CTACACTGCCTTGGCAAGCT...............................................................................................................................................................................2011.001.00------------------------------1.00-------------------------------
...............................................................................................................................................ATCATGGAAGTGAGGACAGG.......................................................................................2011.001.00-------------------------------1.00------------------------------
...................................................................................................................................................................................................CACAGGGGGATTTCAGAGTGCCT................................2311.001.00--------------------------------------1.00-----------------------
..................................................................................................................................................ATGGAAGTGAGGACAGGGAGTAA.................................................................................2311.005.00---------------------------------------------------1.00----------
..................................................................................................................................................................................TCTGCACTCCTCTCTCCCACAGA.................................................2311.002.00-----1.00--------------------------------------------------------
....................................................................................................................................................................................TGCACTCCTCTCTCCCACAGT.................................................211.000.00-------------1.00------------------------------------------------
................................................................................................................................................TCATGGAAGTGAGGACAGGGA.....................................................................................2111.001.001.00-------------------------------------------------------------
........................................................................................................................................................................................................GGGGATTTCAGAGTGTT.................................171.000.00---------------1.00----------------------------------------------
................................................................................................................................................TCATGGAAGTGAGGACAGGGAGT...................................................................................2311.006.00--1.00-----------------------------------------------------------
.................................................................................................................................................CATGGAAGTGAGGACAGGGAAT...................................................................................2211.003.00-1.00------------------------------------------------------------
....................................ACCCACAGGGAAAGTCTGGCT.................................................................................................................................................................................................2111.001.00-----------------------------------1.00--------------------------
.......................................................................................................................................................................................................................................TGCATGATCAGAGGGATAAC201.000.00-------------------------------------------------1.00------------
..............................................................................................................................................................................................................................CGACTAACCTGCATGATCAG........2011.001.00-------------------------------------------1.00------------------
.....................................................................................................................................................................................................................................CCTGCATGATCAGAGGGATC.2011.001.00--------1.00-----------------------------------------------------
.........................................................................................GATTTGTTCTTAGGCGTTT..............................................................................................................................................1911.001.00------------------------------------1.00-------------------------
..................................................................................................................................................................................................................................TAACCTGCATGATCAGAGGGA...2111.001.00-------------------------------------1.00------------------------
........................................................................................................................................................................................................................................GCATGATCAGAGGGATCGTA201.000.00------------1.00-------------------------------------------------
......................................................................AAGCTGAAACTTTGAGTGT.................................................................................................................................................................191.000.00------------------------------------------------------1.00-------
..................................................................................................................................................ATGGAAGTGAGGACAGGTCT....................................................................................201.000.00---------------------------------------1.00----------------------
.................................................................................................................................................CATGGAAGTGAGGACAGGGAGA...................................................................................2211.001.00-----------------------------------------------------1.00--------
..................................................................................................................................................ATGGAAGTGAGGACAGGGAGC...................................................................................2111.005.00------------------------------------------------1.00-------------
.................................................................................................................................................CATGGAAGTGAGGACAGGGAGT...................................................................................2211.0021.00-----------------------1.00--------------------------------------
.......................................................................................................................................................................................................................................TGCATGATCAGAGGGATTA191.000.00--------------------1.00-----------------------------------------
................................................................................................................................................TCATGGAAGTGAGGACA.........................................................................................1720.500.50----------------------------------------------------------0.50---
...........................................................................................................................................................AGGACAGGGAGAATGTA..............................................................................1730.330.33-----------------------------------------------------------0.33--
..........................................................................................................................................................GAGGACAGGGAGAATGT...............................................................................1740.250.25------------------------------------------------------------0.25-

Antisense strand
GATAGGGATATGTATGGGGAAGCCTTACTAAATTGTACCCACAGGGAAAGTCTGGCTACACTGCCTTGGCAAGCTGAAACTTTGACCTTGATTTGTTCTTAGGCGTTTGATTCCCTCCCCTACATCTAGGATAATACGGTTTTATCATGGAAGTGAGGACAGGGAGAATGTAACTAACTCTGCACTCCTCTCTCCCACAGGGGGATTTCAGAGTGCCTGCCCCGACTAACCTGCATGATCAGAGGGATCG
........................................................................................................................................................(((.(((.((((((..((((........)))))))).)).))))))....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR206942(GSM723283)
other. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR073954(GSM629280)
total RNA. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206940(GSM723281)
other. (brain)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
........................................................................................................................................................................................................................CTGCCCCGACTAACCTGA................ 181.000.00---------------------------1.00----------------------------------
......................................................................................................................................................................................CACTCCTCTCTCCCAGTCT................................................. 191.000.00----------------------------------1.00---------------------------
..........................................................................................................................................................................................................................GCCCCGACTAACC................... 1380.120.12-------------------------------------------------------------0.12