ID: uc009ewc.4
GENE: Lilrb3(10)
chr7:3665837-3666229-


(1)
AGO2.ip 		(2)
B-CELL 		(6)
BRAIN 		(1)
CELL-LINE 		(1)
EMBRYO 		(1)
ESC 		(1)
LIVER 		(6)
OTHER 		(1)
OTHER.mut 		(1)
OVARY 		(2)
SPLEEN 		(6)
TESTES 		(2)
TOTAL-RNA

Sense strand
TCTTCTTCGACGAAGACATCGGGGAAAATTCAGGAAAGATGGTGAGGAGGGTATGTGTAACTTGGGTCTCAGGAGGTGGTGTGTCTCCCTGTGAACATCGAAGCAGGCGCTCAGACACCAGCCATAGGGAAAGCTCAACCTGGGGCAGGGTAGCTTAGAAACGTGCAGATCACAGATCAGAAGGCAATTGGTCTCAGAATCTATGCAATGCCTGTGAACATTACCATGTTCTGGGACATTTCCTCACTCAGCCTTGTGTTGCAAAGACCCCTTCCTTCCTTCCCTGAACATGCCCAGGGGAGGGGCTTCCCATCCTCCTAGCTGAGACTCCCCTCCCTTGCAGTCCAGAAAGAGAAAGACTTGCAACTTTCTTCAGGAGCTGAAGAGCCCATA
.......................................................................................................................................................................((((...))))..((((.....((((((((..(((.(((((((((((.((((((....)))))).((((....))))....)))....)))))))).)))........(((((((((((........)))))))))))................))))))))......))))......................................................
.......................................................................................................................................................................168............................................................................................................................................................................343................................................
SizePerfect hitTotal NormPerfect NormGSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesWT1()
Testes Data. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT2()
Testes Data. (testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR037897(GSM510433)
ovary_rep2. (ovary)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
..................................................................................................................................................................................................................................................................................................................................TGAGACTCCCCTCCCTTGCAGT.................................................22111.0011.001.005.00-----2.00-----1.00-1.00-------1.00-----
..................................................................................................................................................................................................................................................................................................................................TGAGACTCCCCTCCCTTGCAGTAT...............................................2415.0011.001.001.00------2.00----------------1.00---
..................................................................................................................................................................................................................................................................................................................................TGAGACTCCCCTCCCTTGCAG..................................................2114.004.001.001.00---2.00-----------------------
............................................................................................................................................................................CAGATCAGAAGGCAACTGT..........................................................................................................................................................................................................193.000.00---1.001.00------------1.00-----------
........................................................................................................................................................................................................................................................................................................................................................CCAGAAAGAGAAAGATA................................172.000.00---------2.00-------------------
...................................................................................................................................................................................................................................................................................................................................................................AAGACTTGCAACTTTCTTC...................1911.001.001.00----------------------------
....................................................................TCAGGAGGTGGTGTGTGGAG.................................................................................................................................................................................................................................................................................................................201.000.00----1.00------------------------
............................................................................................................................TAGGGAAAGCTCAACGTG...........................................................................................................................................................................................................................................................181.000.00----1.00------------------------
............................................AGGAGGGTATGTGTAGGAT..........................................................................................................................................................................................................................................................................................................................................191.000.00----------------------1.00------
............................................................................................................................................................................CAGATCAGAAGGCAACCG...........................................................................................................................................................................................................181.000.00---1.00-------------------------
........GACGAAGACATCGGGGAA...............................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------1.00----
..................................................GTATGTGTAACTTGGGTCTCAGGAGGTGGTGTGTC....................................................................................................................................................................................................................................................................................................................3511.001.001.00----------------------------
.................................................................................................................................................CAGGGTAGCTTAGAAACGTGCA..................................................................................................................................................................................................................................2211.001.00-1.00---------------------------
..............................................................................................................................................................................................................................................................TGTGTTGCAAAGACCCCGTA.......................................................................................................................201.000.00----------------1.00------------
....................................................................................................................................................................................................................................................................................................CCCAGGGGAGGGGCTTCTTT.................................................................................201.000.00-1.00---------------------------
...................................................................................................................................................................................................................................................................................................................................GAGACTCCCCTCCCTTGCAGT.................................................2111.001.00-----------1.00-----------------
....................................................................................................................................................................................................................................................................................................CCCAGGGGAGGGGCTTCCCATCTAT............................................................................2511.001.00--------------------1.00--------
...........................................................................................TGAACATCGAAGCAGGCGCTCAGACACCAGC...............................................................................................................................................................................................................................................................................3111.001.00------1.00----------------------
...............................AGGAAAGATGGTGAGAGTA.......................................................................................................................................................................................................................................................................................................................................................191.000.00----1.00------------------------
............................................................................................................................................................................CAGATCAGAAGGCAAGTCT..........................................................................................................................................................................................................191.000.00---1.00-------------------------
....................................................................................................................................................................................................................................................................................................CCCAGGGGAGGGGCTTCCCATCT..............................................................................2311.001.00-------------------1.00---------
..................................................................................................................................................................................................................................................................................................................................TGAGACTCCCCTCCCTTGCAGA.................................................2211.004.001.00----------------------------
.....................................................................CAGGAGGTGGTGTGTGCC..................................................................................................................................................................................................................................................................................................................181.000.00------------------1.00----------
.............................................................................................................................AGGGAAAGCTCAACCTGGGGCAGGGTAGCTT.............................................................................................................................................................................................................................................3111.001.001.00----------------------------
..................................................................................................................................................................................................................................................................................................................................TGAGACTCCCCTCCCTTGCCGT.................................................2211.001.00--------------1.00--------------
............................TTCAGGAAAGATGGTCTGC..........................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------1.00-------
..................................................................................................................................................................................................................................................................................................................................TGAGACTCCCCTCCCTTGCAGTA................................................2311.0011.00-1.00---------------------------
....................................................................................................................................................................................................................................................................................................CCCAGGGGAGGGGCTTCCCATC...............................................................................2211.001.00------------1.00----------------
..................................................................................................................................................................................................................................................................................................................................TGAGACTCCCCTCCCTTGC....................................................1911.001.001.00----------------------------
..............................................................................................................................................................................................................................................................................................................................TAGCTGAGACTCCCCTCCCTTG.....................................................2211.001.00-----1.00-----------------------
................CATCGGGGAAAATTCAGGAAAGATGTC..............................................................................................................................................................................................................................................................................................................................................................271.000.001.00----------------------------
.............................................................................................................................................................................................................................................................................................................................................TCCCTTGCAGTCCAG.............................................1530.330.33---------------------------0.33-

Antisense strand
TCTTCTTCGACGAAGACATCGGGGAAAATTCAGGAAAGATGGTGAGGAGGGTATGTGTAACTTGGGTCTCAGGAGGTGGTGTGTCTCCCTGTGAACATCGAAGCAGGCGCTCAGACACCAGCCATAGGGAAAGCTCAACCTGGGGCAGGGTAGCTTAGAAACGTGCAGATCACAGATCAGAAGGCAATTGGTCTCAGAATCTATGCAATGCCTGTGAACATTACCATGTTCTGGGACATTTCCTCACTCAGCCTTGTGTTGCAAAGACCCCTTCCTTCCTTCCCTGAACATGCCCAGGGGAGGGGCTTCCCATCCTCCTAGCTGAGACTCCCCTCCCTTGCAGTCCAGAAAGAGAAAGACTTGCAACTTTCTTCAGGAGCTGAAGAGCCCATA
.......................................................................................................................................................................((((...))))..((((.....((((((((..(((.(((((((((((.((((((....)))))).((((....))))....)))....)))))))).)))........(((((((((((........)))))))))))................))))))))......))))......................................................
.......................................................................................................................................................................168............................................................................................................................................................................343................................................
SizePerfect hitTotal NormPerfect NormGSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesWT1()
Testes Data. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT2()
Testes Data. (testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR037897(GSM510433)
ovary_rep2. (ovary)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
.....................................................................................................................................................................CAGATCACAGATCAGAAGGCAATTGGT......................................................................................................................................................................................................... 2717.007.00--7.00--------------------------
...............................................................................................................CAGACACCAGCCATAGGGAAAGCTCAAC.............................................................................................................................................................................................................................................................. 2811.001.001.00----------------------------
...............................................................................TGTGTCTCCCTGTGATTTA....................................................................................................................................................................................................................................................................................................... 191.000.00---1.00-------------------------
..........................................................................................................................................................................................................................................................................................................................................CCCTCCCTTGCAGTCCAGAAAGAGA...................................... 2511.001.00----------1.00------------------
........................................................................................................................................................GCTTAGAAACGTGCAGATCACAGATCAGA.................................................................................................................................................................................................................... 2911.001.00------1.00----------------------
..................................................................................................CGAAGCAGGCGCTC......................................................................................................................................................................................................................................................................................... 1420.500.50--------------------------0.50--
..............................................................................................................................................................................................GTCTCAGAATCTATGC........................................................................................................................................................................................... 1640.250.25----------------------------0.25