ID: uc009dtd.3
GENE: Ing4(4)
chr6:124997294-124997549+


(1)
AGO.mut
(2)
AGO1.ip
(11)
AGO2.ip
(1)
AGO3.ip
(8)
B-CELL
(23)
BRAIN
(6)
CELL-LINE
(2)
DCR.mut
(2)
DGCR8.mut
(9)
EMBRYO
(9)
ESC
(2)
FIBROBLAST
(2)
KIDNEY
(3)
LIVER
(4)
LYMPH
(12)
OTHER
(6)
OTHER.mut
(1)
PANCREAS
(2)
PIWI.ip
(2)
PIWI.mut
(4)
SKIN
(7)
SPLEEN
(16)
TESTES
(2)
THYMUS
(2)
UTERUS

Sense strand
ACAGATCGAGTCCAGTGACTATGACAGCTCTTCTAGCAAAGGCAAAAAGAGTGAGGAGGGGCGGGGCTGTGAGATGCGGGCAAGGAGTCAGAGGGAGAAGAGGCCAACTCCAGCTAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGAAGGCCGGACCCAAAAGGAGAAAAAAGCTGCCAGAGCCCGTTCCAAAGGGAAA
.................................................................................................................(((((((((((.((....(((.(((.(((..(((((((((..........)))))))))..)))..))).)))...)).))))))))))).....................................................
.............................................................................................................110.............................................................................................206................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR206940(GSM723281)
other. (brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR206939(GSM723280)
other. (brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR073955(GSM629281)
total RNA. (blood)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR039610(GSM527274)
small RNA-Seq. (brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR553585(SRX182791)
source: Kidney. (Kidney)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGA....................................................90154.0054.0054.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGAAGT.................................................22121.003.00---------1.00--------1.00-------2.00---1.00-----2.00-2.002.00---2.00----------------1.00---1.00---1.00-------1.00-------------1.001.00---1.00---1.00----------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGG.......................................................................................................................23115.0015.00-1.00---5.00-------1.00--2.00---------------2.00--1.00-------------------------1.00------------------------------1.00-1.00---------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGAAG..................................................25112.0012.00--2.00-1.00--1.002.00---------1.00-1.00------1.00----------------1.00-------1.00----------------1.00----------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGA......................................................................................................................24112.0012.00-1.00-1.00---------1.00--1.00----1.002.00-------1.00------------------1.00-----------------1.00------------1.00-------1.00---------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGT....................................................90111.006.0011.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCT.........................................................................................................................21111.0011.00-2.00-2.003.00--1.00--1.00--------------------------------------------------------------------1.00-----1.00------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGA....................................................2219.009.00---------1.00--5.001.00--------1.00----------------------------1.00----------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGA.......................................................................................................................2317.002.00---------1.00-----------------------1.00-1.00-2.00---1.00-----------------------------1.00--------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAG.....................................................8916.006.006.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAT.....................................................................................................................2515.0012.00-1.00-1.00-1.00-----------------------------------------------------------------------------1.001.00-------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGTA.....................................................................................................................2514.0015.00-----------------4.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTAGAAG..................................................2614.004.00--------------1.00---------2.00-------------------1.00-----------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAA.....................................................................................................................2514.0012.00-------------------------3.00------------------------------------1.00-----------------------------------------------
.................................................................................................................CTAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGA....................................................9114.004.004.00-------------------------------------------------------------------------------------------------------------
.....TCGAGTCCAGTGACTATGACA......................................................................................................................................................................................................................................2113.003.00-----------3.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGAAG..................................................2413.003.00--------------1.00--------------------------------------------1.00----------------------------------------1.00---------
..................................................................................................................TAGGAGGGAGCGGCACTGT...........................................................................................................................193.000.00----------------------------------2.00---------------------------------------------------------------1.00-----------
....ATCGAGTCCAGTGACTATGACAGC....................................................................................................................................................................................................................................2413.003.00------3.00-------------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCC..........................................................................................................................2013.003.00----1.00------------------------------------------------------------1.00-------------------------------------1.00------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAAA....................................................................................................................2613.0012.00-2.00------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGAA...................................................2413.003.00--------1.00-----------------------------------------------1.001.00----------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGAAG..................................................2113.003.00-------1.00--------------------------------------------------------------1.00---------------1.00-----------------------
...............................................................................................................................CACTGCCTGGACCAGGAGCAAAGA.........................................................................................................2412.002.00---------------------2.00----------------------------------------------------------------------------------------
.........................................GCAAAAAGAGTGAGGAGGGGCGGGG..............................................................................................................................................................................................2512.002.00----------------------------2.00---------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGT....................................................2212.001.00-----------------------------2.00--------------------------------------------------------------------------------
........................................................................................................................................................................................GCTTACCCTTTCTTCCTAGAAG..................................................2212.002.00-----------2.00--------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTG........................................................................................................................2212.002.00-1.00--1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................TGCCTGGACCAGGAGCAAAGA.........................................................................................................2112.002.00---1.00-------------------1.00--------------------------------------------------------------------------------------
...........CCAGTGACTATGACAGCTCTTCTAGCAAAG.......................................................................................................................................................................................................................3012.002.00-------------------------------2.00------------------------------------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGCACTGA...........................................................................................................................212.000.00----------------------------------------------2.00---------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGAA......................................................................................................................2412.002.00---------1.00--------------------------------------------------------------------------------------------1.00-------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGC....................................................2312.001.00----------------------------------------1.00-1.00-------------------------------------------------------------------
.....................................................................TGAGATGCGGGCAAGGA..........................................................................................................................................................................1712.002.00------2.00-------------------------------------------------------------------------------------------------------
.................ACTATGACAGCTCTTCCCTT...........................................................................................................................................................................................................................201.000.00------------------1.00-------------------------------------------------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGGCGC.............................................................................................................................191.000.00---------------------------------------------------------------------------------------1.00----------------------
..................................................................................................................TAGGAGGGAGCGGCACTGTTT.........................................................................................................................211.000.00----------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTAA.......................................................................................................................2311.0011.00---1.00----------------------------------------------------------------------------------------------------------
....................ATGACAGCTCTTCTAGCAAAGGCA....................................................................................................................................................................................................................2411.001.00-----------------------1.00--------------------------------------------------------------------------------------
...............TGACTATGACAGCTCTTCTAGCAAAGG......................................................................................................................................................................................................................2711.001.00---------------------------------------------------------------------------------------------1.00----------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAAT....................................................................................................................2611.0012.00-------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGA....................................................2311.001.00-------1.00------------------------------------------------------------------------------------------------------
.....................TGACAGCTCTTCTAGCAAA........................................................................................................................................................................................................................1911.001.00----------------------------------------1.00---------------------------------------------------------------------
.........................................GCAAAAAGAGTGAGGAGGGGCGGGGCTGTGAGA......................................................................................................................................................................................3311.001.00---------------------------------------------1.00----------------------------------------------------------------
.....TCGAGTCCAGTGACTATGACAGC....................................................................................................................................................................................................................................2311.001.00--------------------1.00-----------------------------------------------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGCACTGCC..........................................................................................................................2211.001.00-------1.00------------------------------------------------------------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGCACT.............................................................................................................................1911.001.00--------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGTAGT.................................................221.000.00------------------------------------------------------------------------------------------------1.00-------------
.........GTCCAGTGACTATGACAGCTCT.................................................................................................................................................................................................................................2211.001.00---------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTCGAA...................................................251.000.00--------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAG.....................................................2111.001.00---------------1.00----------------------------------------------------------------------------------------------
.............AGTGACTATGACAGCTCTTCT..............................................................................................................................................................................................................................2111.001.00-------------------1.00------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGTAG.....................................................................................................................2511.002.00------------------------------------------------------------------------------1.00-------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCATAA.......................................................................................................................231.000.00----------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................TGGACCAGGAGCAAAGAGAACTTA..................................................................................................2411.001.00---------------------------------------------1.00----------------------------------------------------------------
......................GACAGCTCTTCTAGCAAAGGC.....................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------1.00--------------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAG.....................................................2211.001.00------------------------------------------------1.00-------------------------------------------------------------
..........TCCAGTGACTATGACAGCTC..................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------1.00----
.................................................................................................................CTAGGAGGGAGCGGCACTGC...........................................................................................................................2011.001.00-------------1.00------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCA.........................................................................................................................2111.003.00----------------------------------------------------------1.00---------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGAGTT........................................................................................................................221.000.00----------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AGAAGGCCGGACCCAAAAACCA.................................2211.001.00----------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTAGAAC..................................................2611.001.00------------------------------------------------------------------------1.00-------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTTT.......................................................................................................................2311.0011.00------------------------------------------1.00-------------------------------------------------------------------
............................................................................................................................................AGGAGCAAAGAGAACTTAAC................................................................................................2011.001.00---------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................CTAGGAGGGAGCGGCACTG............................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------
.......................................AGGCAAAAAGAGTGAACTG......................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------------1.00--------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCT..........................................................................................................................201.000.00--------------------------------------------------------------------------------------------------------1.00-----
...............................................................................................AGAAGAGGCCAACTCCCAGA.............................................................................................................................................201.000.00--------------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTA......................................................2111.001.00---------------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................................................................TCCCGGCTTACCCTTTCTTCCTAG.....................................................2411.001.00---------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTA............................................................................................................................181.000.00----------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CCCAAAAGGAGAAAACACC.........................191.000.00-------------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................AGAAGGCCGGACCCAAAA.....................................1811.001.00---------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGT....................................................191.000.00-------------------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................GGACCAGGAGCAAAGAGAACTT...................................................................................................2211.001.00-------------------1.00------------------------------------------------------------------------------------------
.....................TGACAGCTCTTCTAGCAAAG.......................................................................................................................................................................................................................2011.001.00---------------1.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................AAGCTGCCAGAGCCCGTTCCA........2111.001.00-----------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................TACCCTTTCTTCCTAGAAGT.................................................201.000.00----------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGAAA.........................................................................................................................211.000.00---------------------------------------------------------------1.00----------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGAAAT........................................................................................................................221.000.00-----------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGC....................................................2211.001.00---------------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTAGAA...................................................2511.001.00--------------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGA....................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------
......................................................................................................................................TGGACCAGGAGCAAAGAG........................................................................................................1821.001.00----------------------------------------------------------------------------------------------------------0.500.50--
............................................................................................................................................................................................ACCCTTTCTTCCTAGA....................................................1660.500.50--0.50-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................CTGGACCAGGAGCAAA...........................................................................................................1630.330.33------------------------------------------------------------------------------------------------------------0.33-
..............................................................................GGCAAGGAGTCAGAGGGA................................................................................................................................................................1830.330.33--------------0.33-----------------------------------------------------------------------------------------------
........................................................................................................................................................................TTGTCTCTGCCTCCCGG.......................................................................1740.250.25-------------------------------------------------------------------------------------------------------------0.25
.....................................................................................................................................................................................................................CCAAAAGGAGAAAAAAG..........................1780.120.12------0.12-------------------------------------------------------------------------------------------------------

Antisense strand
ACAGATCGAGTCCAGTGACTATGACAGCTCTTCTAGCAAAGGCAAAAAGAGTGAGGAGGGGCGGGGCTGTGAGATGCGGGCAAGGAGTCAGAGGGAGAAGAGGCCAACTCCAGCTAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGAAGGCCGGACCCAAAAGGAGAAAAAAGCTGCCAGAGCCCGTTCCAAAGGGAAA
.................................................................................................................(((((((((((.((....(((.(((.(((..(((((((((..........)))))))))..)))..))).)))...)).))))))))))).....................................................
.............................................................................................................110.............................................................................................206................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR206940(GSM723281)
other. (brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR206939(GSM723280)
other. (brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR073955(GSM629281)
total RNA. (blood)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR039610(GSM527274)
small RNA-Seq. (brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR553585(SRX182791)
source: Kidney. (Kidney)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
...........................................................................................................................................................................TCTCTGCCTCCCGGCTAA................................................................... 185.000.00--5.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CTTAACCCATCTTTTAGGG................................................................................... 192.000.00-------------------------------------------------------------------------1.001.00-----------------------------------
...........CCAGTGACTATGACAGCTCTTCTAGCAAA........................................................................................................................................................................................................................ 2911.001.00-------------------------------------------------------------------------------------------------1.00------------
....................................................................................................................GGAGGGAGCGGCACTCAA.......................................................................................................................... 181.000.00------------------------1.00-------------------------------------------------------------------------------------
..................................................................................................AGAGGCCAACTCCAGCGAAG.......................................................................................................................................... 201.000.00--------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................................................................................................................GCTGCCAGAGCCCGTTCCAAAGGGAA. 2611.001.00------------------------------------------------------------------1.00-------------------------------------------
........................................................................................................................................................................................................................................GCCAGAGCCCGTTCCGC....... 171.000.00---------------------------------------------------------------------------------1.00----------------------------
.............AGTGACTATGACAGCTCTTCTAGCA.......................................................................................................................................................................................................................... 2511.001.00-----------------------------------------------------1.00--------------------------------------------------------
.........................................................................................................................................................................................................................................CCAGAGCCCGTTCCA........ 1590.220.22--0.22-----------------------------------------------------------------------------------------------------------