ID: uc009bhz.2
GENE: Wdr91(2)
chr6:34836129-34836378-


(1)
AGO.mut 		(1)
AGO1.ip 		(9)
AGO2.ip 		(1)
AGO3.ip 		(5)
B-CELL 		(30)
BRAIN 		(5)
CELL-LINE 		(3)
DCR.mut 		(1)
DGCR8.mut 		(12)
EMBRYO 		(8)
ESC 		(4)
FIBROBLAST 		(1)
HEART 		(3)
KIDNEY 		(12)
LIVER 		(1)
LUNG 		(2)
LYMPH 		(13)
OTHER 		(6)
OTHER.mut 		(1)
OVARY 		(2)
PIWI.ip 		(1)
SKIN 		(5)
SPLEEN 		(16)
TESTES 		(3)
THYMUS 		(4)
TOTAL-RNA

Sense strand
AGGAACCCCAGGTGAGCTCTGTCCCCAAGGATCCCCAGTCCTCCCTTTGACCATATCAGGAGGCTGCTCAGAAAAGGTGACCTGGAAGGGTCAGCACTTTGTGGCCCAGGAGGCCCCTGGCCACTAGAGCAGCTGTCACAGAGGGTAAGGGGACCCTGCTATGCCCTGTGACCTTAACAGGTGTGGCCTTGCTCTCTCAGACATGCAGCAGCACGAGTGTGCTATGAGCTGGAAGGCCCACTGCGGCGAG
....................................................................................................................................(((....((((((((.((....)).((((((.(((((.......)))))))))))..)))))))))))..................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT1()
Testes Data. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR059768(GSM562830)
Treg_control. (spleen)		mjLiverWT1()
Liver Data. (liver)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR206941(GSM723282)
other. (brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR059771(GSM562833)
CD4_control. (spleen)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR095853(SRX039174)
"sequencing of miRNA from wild type and disea. (heart)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		mjTestesWT3()
Testes Data. (testes)		SRR206940(GSM723281)
other. (brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM475280(GSM475280)
Mili-IP. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR206939(GSM723280)
other. (brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGC...........................................................................................22136.0036.00-2.00-3.001.008.002.00-1.002.00-2.00-2.001.002.00-1.00----1.00-------------1.00-----1.00--1.00---2.00---1.00---------------------1.00---------1.00----------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGC...........................................................................................23130.0030.00-1.00-5.004.00-------5.00--1.00---1.00-------1.00---1.00----1.00--1.00-2.00-1.00--1.00---------------------------------------1.00--------------1.00----1.00---1.00--1.00------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGC...........................................................................................21124.0024.00---1.001.00--2.001.00-4.001.00-----1.001.00-1.00-1.00-------1.00--1.00--1.00--1.00--1.00-----------------------1.00----------1.00--1.00--------1.00----1.00-------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGT...........................................................................................23113.005.001.002.00------1.00-----------------1.00-1.00------1.00-----------------------2.00--------1.00-1.00------------------------------------1.00---1.00--------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGA...........................................................................................2212.000.002.002.00-----------------1.00-----1.00--1.00--------------1.00--------------2.00-----1.00----------------------------------------1.00--------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCT..........................................................................................2418.008.001.00----------1.00--1.00-----------2.00-----------------3.00---------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGT...........................................................................................228.000.00-------1.00------------1.00----1.00---------2.00-1.00---1.00-------------------------------1.00----------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCA..........................................................................................2317.0036.00-------------1.00-----1.00--1.00-3.00-----------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCT..........................................................................................2317.007.00--1.00-----------1.00------1.00-------------------------------1.00-1.00-----------------------------------------------------------------1.00-1.00--
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGAA..........................................................................................235.000.00-----------1.00-----1.00----------------1.00----------------------------------------------1.00-----1.00--------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTG............................................................................................2215.005.001.00-----------------1.00------1.001.00-----------------------------1.00---------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGA...........................................................................................2314.005.00---------2.00-----------1.00---------------------------------------------------------1.00----------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTCTC....................................................2214.004.00--------1.00-----------1.00------1.00---------------1.00----------------------------------------------------------------------------------
.................................................................................................................................................................................CAGGTGTGGCCTTGCTCTCTCAGT.................................................244.000.00--------1.00------------------2.00--------------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGCT..........................................................................................2214.004.00------------------1.00--------------------------1.001.001.00------------------------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGA...........................................................................................214.000.00-2.00---------------------------------------------1.00---------1.00--------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCTTA........................................................................................2514.007.00-----------------------4.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CAGGTGTGGCCTTGCTCTCTCA...................................................2213.003.00--------------------------------------3.00---------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCAT.........................................................................................2413.0036.00--1.00-----------1.00----------------------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................TCACAGAGGGTAAGGGGACCCTGC...........................................................................................2413.003.00----2.00----------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................AGGTGTGGCCTTGCTCTCTCAGT.................................................233.000.00-------------------1.00----------------------------2.00-----------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGAC................................................................................................1813.003.00--------------------------------1.00------------------1.00-------------------1.00------------------------------------------------------
...........................................................................................................................................AGAGGGTAAGGGGACCCTGCT..........................................................................................2113.003.001.00------------1.00-------------------------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGTAAA........................................................................................253.000.00--2.00-------------------------------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGTAA.........................................................................................233.000.001.00------2.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGTTT.........................................................................................242.000.00-------------------------------1.00-----1.00----------------------------------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGCTA.........................................................................................2312.002.00--1.00---1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCAAT........................................................................................2612.0030.00-------1.00------------------------------------------------------------------------------------------1.00---------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCC..............................................................................................1912.002.00------2.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGTTT.........................................................................................2512.005.002.00-----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGAAT.........................................................................................2512.005.00--1.00-----------------------------------------------------------------------1.00---------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGAAA.........................................................................................2512.005.00---------1.00---------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTCT.....................................................2112.002.00---------------------------------------------------------------------1.00--------------------1.00-----------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACA...............................................................................................182.000.00-------------------------------------1.00--1.00-------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACC...............................................................................................1912.002.00------------------------------2.00-----------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGAAGA........................................................................................2611.005.00------------------------------------------------------------------------------1.00-----------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCAG.............................................................................................2111.002.00--------------------------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................CAGGTGTGGCCTTGCTCTCTCAAT.................................................2411.003.00---------1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTTT...........................................................................................2311.001.00---------------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTC......................................................2011.001.00------------------------------------------------------------------------------------------------------------1.00-----------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGAA..........................................................................................2411.005.00----------1.00-------------------------------------------------------------------------------------------------------------------
...............................................TGACCATATCAGGAGGT..........................................................................................................................................................................................171.000.00----------------------------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCTTTT.......................................................................................2711.008.00----------------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGTAAG........................................................................................2611.005.00----------------------------------------------------------------------------------------------------1.00-------------------------
...........................................................................................................................................................................................................TGCAGCAGCACGAGTGTGCTATGAGC.....................2611.001.00----------------------------------------------------1.00-------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGTTTT........................................................................................251.000.00---------------------------------------------------------------------------------------------------------------------1.00--------
...............................................................................................................................................................TATGCCCTGTGACCTTAAC........................................................................1911.001.00---------------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTATT..........................................................................................2411.001.00----------------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCAAA........................................................................................2611.0030.00--------------1.00---------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GTGCTATGAGCTGGAAGG..............1811.001.00------------------------------------------------------------------------1.00-----------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACC...............................................................................................1811.001.00------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GGTGTGGCCTTGCTCTTCG....................................................191.000.00--------------------------------------------------------1.00---------------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGCAGT........................................................................................2411.0024.00------------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTAT...........................................................................................2311.001.00----------------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCATT........................................................................................2611.0030.00---------------------------------------------------------------------------------------------1.00--------------------------------
......................................................................................................................................GTCACAGAGGGTAAGGTC..................................................................................................181.000.00-----------------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCAGA........................................................................................2511.0036.00-----------1.00------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGG...........................................................................................2311.005.00---------------1.00--------------------------------------------------------------------------------------------------------------
.......................................................TCAGGAGGCTGCTCATTGG................................................................................................................................................................................191.000.00-----------------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCT.............................................................................................2011.001.00-----------------------------------------------------------------1.00------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTTT...........................................................................................2211.001.001.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGAAA.........................................................................................241.000.00--1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCATGA...........................................................................................2211.001.00----------------------------------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................TCACAGAGGGTAAGGGGAC................................................................................................1911.001.00------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GCCCTGTGACCTTAACTT......................................................................181.000.00---------------------------------------------------------------------------------------------------1.00--------------------------
.........................................................AGGAGGCTGCTCAGAAAAGGTGA..........................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------1.00---------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCAA.............................................................................................191.000.00---------------------------------------------------1.00--------------------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGAGA.........................................................................................231.000.00--------------------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCT.............................................................................................2111.001.00--------------------------------------------------------------1.00---------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGTAT.........................................................................................231.000.00-1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................CCTGGCCACTAGAGCAGCTGT..................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------1.00------------------------------
..................................................................................................................................................................................AGGTGTGGCCTTGCTCTCTCAT..................................................221.000.00-------------------------------------------------------------------1.00----------------------------------------------------------
.................................................................................................................................................................................................................AGCACGAGTGTGCTATGAGCTG...................2211.001.00------------------------------------------1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................................GACATGCAGCAGCACGAGTGT..............................2111.001.00--------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................AGGTGTGGCCTTGCTCTCTC....................................................2011.001.00--------------------------------1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................TCACAGAGGGTAAGGGGACCCTGCT..........................................................................................2511.001.00---------------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCAAAT.......................................................................................2711.0030.00----------------------------------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTCTCTTT.................................................2511.004.00------------------------------------------------------------------------------------------------------------------1.00-----------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCTATGCCC....................................................................................2911.001.00--1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CGAGTGTGCTATGAGCTGGAAGGCCC...........2611.001.00-------------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCAA.........................................................................................2511.0030.00--1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGCTT.........................................................................................2311.004.00----------------------------------------------------------------------------------1.00-------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTCTCAGT.................................................251.000.00------------------------------------------------------------------------------------------------------------------------1.00-----
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGTT..........................................................................................2411.005.00----------------------1.00-------------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCAA.........................................................................................2411.0036.00----------------------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCC.............................................................................................211.000.00----------------------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GCCCACTGCGGCGAGTTCT191.000.00--------1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................GTCACAGAGGGTAAGCTCT.................................................................................................191.000.00-----------------------------1.00------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCAATT...........................................................................................2311.002.00-----------------------------------------------------------------------------------------------------------------------1.00------
...........................................................................................................................................AGAGGGTAAGGGGACCCTGC...........................................................................................2011.001.00----------------------------------------------------------------------------------------1.00-------------------------------------
.....................................................................................................................................................................CTGTGACCTTAACAGGTGTGGC...............................................................2211.001.00-------------------------------------------------------------------------------------------------------1.00----------------------
.......................................................................................................................................................................................................GACATGCAGCAGCACGAGTGTGCTATG........................2711.001.00-----------------------------------------------------------------------------------1.00------------------------------------------
.....................................................................................................................................................................................................................CGAGTGTGCTATGAGCTGGAAGGCCCA..........2711.001.00-------------------------------------------------------------------------------------------------------------------1.00----------
............................................................................................................................TAGAGCAGCTGTCACAGAGGGTAAGGG...................................................................................................2711.001.00----------------------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................AGAGGGTAAGGGGACCCTG............................................................................................1911.001.00---------------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCAT.........................................................................................2511.0030.00------------------------------------------------------1.00-----------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGCTAATT......................................................................................281.000.00------------------------------------------------------1.00-----------------------------------------------------------------------
.....................................................TATCAGGAGGCTGCTCAGAAAA...............................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------------------------------1.00-------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTGCTT.........................................................................................2411.007.00---------------------------------------------1.00--------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGACCCTAAAA.........................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTCTCA...................................................2311.001.00-----------------1.00------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTCTCATT.................................................2511.001.00------------------------------------------------------------------------------------------------------1.00-----------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGTA..........................................................................................2411.005.00------------------1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................CACAGAGGGTAAGGGGACCCTGAT..........................................................................................2411.005.00----------------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................GTCACAGAGGGTAAGTTCT.................................................................................................191.000.00---------------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGCAA.........................................................................................2311.0024.00----------------1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................ACAGGTGTGGCCTTGCTCTCTCAT..................................................2411.001.00--------------------------------------------------------------------------------------------------------1.00---------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTGCA..........................................................................................2211.0024.00------------------------------------------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................TCACAGAGGGTAAGGGGACCCTGTTT.........................................................................................261.000.001.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CAGAGGGTAAGGGGACCCTAAT..........................................................................................221.000.00-------------------------------------------------------------------------------------------1.00----------------------------------
..............................................................................................................................................GGGTAAGGGGACCCTGCT..........................................................................................1811.001.00---------------------------------1.00--------------------------------------------------------------------------------------------
.........................................................................AAGGTGACCTGGAAGGGT...............................................................................................................................................................1820.500.50----------------------------------------------------------------------------------------------------------------------------0.50-
.........................................................................................GTCAGCACTTTGTGGC.................................................................................................................................................1620.500.50----------------------------0.50-------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGAGGGTAAGGGGA.................................................................................................1630.330.33-----------------------------------------------------------------------------------------------------------------------------0.33

Antisense strand
AGGAACCCCAGGTGAGCTCTGTCCCCAAGGATCCCCAGTCCTCCCTTTGACCATATCAGGAGGCTGCTCAGAAAAGGTGACCTGGAAGGGTCAGCACTTTGTGGCCCAGGAGGCCCCTGGCCACTAGAGCAGCTGTCACAGAGGGTAAGGGGACCCTGCTATGCCCTGTGACCTTAACAGGTGTGGCCTTGCTCTCTCAGACATGCAGCAGCACGAGTGTGCTATGAGCTGGAAGGCCCACTGCGGCGAG
....................................................................................................................................(((....((((((((.((....)).((((((.(((((.......)))))))))))..)))))))))))..................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT1()
Testes Data. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR059768(GSM562830)
Treg_control. (spleen)		mjLiverWT1()
Liver Data. (liver)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR206941(GSM723282)
other. (brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR059771(GSM562833)
CD4_control. (spleen)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR095853(SRX039174)
"sequencing of miRNA from wild type and disea. (heart)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		mjTestesWT3()
Testes Data. (testes)		SRR206940(GSM723281)
other. (brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM475280(GSM475280)
Mili-IP. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR206939(GSM723280)
other. (brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
........................................................................................................................................................ACCCTGCTATGCCCTAGCT............................................................................... 193.000.00-------------1.00------------------------------------1.00-------------------------------------------------------------------1.00-------
................................................................................................CTTTGTGGCCCAGGAGCAGG...................................................................................................................................... 202.000.00-------------------------------------------------------------------------------------------------1.00------------------------1.00---
......................................................................................................................................................................................................................................GGAAGGCCCACTGCGGC... 171.000.00--------------------------------------------------------------------------------------------------------------------1.00---------
..............................ATCCCCAGTCCTCCCGTT.......................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------------------------1.00----------------
......................................................................................AGGGTCAGCACTTTGAA................................................................................................................................................... 171.000.00----------1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................GAAGGGTCAGCACTTTGAG................................................................................................................................................... 191.000.00-------------------------------1.00----------------------------------------------------------------------------------------------