ID: uc008wvj.8
GENE: Gm1060(8)
chr5:30658348-30658597+


(5)
AGO2.ip 		(1)
B-CELL 		(21)
BRAIN 		(3)
CELL-LINE 		(1)
DGCR8.mut 		(1)
EMBRYO 		(1)
ESC 		(1)
HEART 		(4)
LIVER 		(1)
LYMPH 		(2)
OTHER 		(3)
OTHER.mut 		(1)
OVARY 		(1)
PIWI.mut 		(1)
SPLEEN 		(7)
TESTES 		(1)
TOTAL-RNA

Sense strand
AGGGATGACATCAGAGCTAAAGTCATAGGAAGGTCACTCTGCTAGAGAGCCAGCCAGAACAGGGTGTTCAGAAAGGTGGCAGAAGACAGTCCCTCGGAAGATGGGGGGGGGGGGGGGCGACACCCATAGCTCACAGGACTGAGAAGGCCGGGGATTGCTGAGGTCAGCTGCTGTGCTCAGTGCCTTCCCTTCCTTCACAGACACTTCATCATCATCGATGAGGAGAAGTTTCGGGAGATTTGGCTGATGA
..........................................................................................................................................(((.(((((..(((((..((((((..(((...)))..))))))...)))))..))))).)))..................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR206941(GSM723282)
other. (brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR206942(GSM723283)
other. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
.............................................................................................................................................AGAAGGCCGGGGATTGCTGAG........................................................................................21113.0013.004.002.00-3.00------1.00-----------1.00-----1.00-------1.00--------
...........................................................................................................................................TGAGAAGGCCGGGGATTGCTGA.........................................................................................2219.009.001.001.00--3.00------1.00---------1.00--1.00-----1.00--------------
........................................................................................................................................................................TGCTGTGCTCAGTGCATT................................................................188.000.00--5.00----3.00-------------------------------------
..................................................................................................................................................................................AGTGCCTTCCCTTCCTTCACAGT.................................................233.000.00--------2.00-------------------------------1.00----
.............................................................................................................................................AGAAGGCCGGGGATTGCTGA.........................................................................................2013.003.00-----2.00--------------------1.00------------------
.............................................................................................................................................AGAAGGCCGGGGATTGCTGAGA.......................................................................................2212.0013.00-----------------------1.00----------1.00----------
...........................................................................................................................................TGAGAAGGCCGGGGATTG.............................................................................................1812.002.002.00--------------------------------------------
...........................................................................................................................................TGAGAAGGCCGGGGATTGCT...........................................................................................2012.002.001.00-------------------------------------1.00------
..........................................................................................................................................CTGAGAAGGCCGGGGATTGCTGA.........................................................................................2312.002.00-----2.00---------------------------------------
.............................................................................................................................................AGAAGGCCGGGGATTGCTGAGT.......................................................................................2212.0013.001.00----------------------------------1.00---------
...........................................................................................................................................TGAGAAGGCCGGGGATTGCTG..........................................................................................2112.002.00------2.00--------------------------------------
.............................................................................................................................................AGAAGGCCGGGGATTGCTG..........................................................................................1911.001.001.00--------------------------------------------
.............................................................................................................................................AGAAGGCCGGGGATTGCTGGG........................................................................................2111.001.00-1.00-------------------------------------------
................................................................................................................................................................................TCAGTGCCTTCCCTTCCTTCACA...................................................2311.001.00--------1.00------------------------------------
.....................................................................................................................................................................................................................ATCGATGAGGAGAAGGAGG..................191.000.00---------1.00-----------------------------------
...........................................................................................................................................TGAGAAGGCCGGGGATTGTTGT.........................................................................................2211.002.00------------------------------------------1.00--
.................................................................................................................................................................................CAGTGCCTTCCCTTCCTTCACA...................................................2211.001.00------1.00--------------------------------------
...........................................................................................................................................TGAGAAGGCCGGGGATTGCTGATA.......................................................................................2411.009.00------1.00--------------------------------------
.............................................................................................................................................AGAAGGCCGGGGATTGCTGAGAT......................................................................................2311.0013.001.00--------------------------------------------
.......................................................................................................GGGGGGGGGGGGGGCGAAAAG..............................................................................................................................211.000.00---------------1.00-----------------------------
..............................................................................................................................TAGCTCACAGGACTGAGAAGGCCGGG..................................................................................................2611.001.00--------------------1.00------------------------
..GGATGACATCAGAGCAAC......................................................................................................................................................................................................................................181.000.00-------------------------------------------1.00-
..............................................................................................................................TAGCTCACAGGACTGATG..........................................................................................................181.000.00-------------1.00-------------------------------
.............................................................................................................................................AGAAGGCCGGGGATTGCTGAAG.......................................................................................2211.003.00-------------------------------------1.00-------
...........................................................................................................................................TGAGAAGGCCGGGGATTGTTA..........................................................................................2111.002.00-----------1.00---------------------------------
.................................................................................................................................CTCACAGGACTGAGACGT.......................................................................................................181.000.00--------------1.00------------------------------
..........................................................................................................................................................................................................................TGAGGAGAAGTTTCGGGAGATTTGGA......261.000.00-------------------------------1.00-------------
...................................................................................................................................CACAGGACTGAGAAGGCTA....................................................................................................191.000.00---1.00-----------------------------------------
.............................................................................................................................................................................................................TCATCATCATCGATGTCGC..........................191.000.00----1.00----------------------------------------
.......................................TGCTAGAGAGCCAGCCAGAACAGGGCG........................................................................................................................................................................................271.000.00-----------------------------------------1.00---
.............................................................................................................................................AGAAGGCCGGGGATTGCT...........................................................................................1811.001.001.00--------------------------------------------
...................................................................................................................................................................................................................TCATCGATGAGGAGAAGTTTCGGGAG.............2611.001.00------------1.00--------------------------------
.......................................TGCTAGAGAGCCAGCCAGAACAGGGTGT.......................................................................................................................................................................................2811.001.00--------------------------------1.00------------
................................................................................................................................................................................................................TCATCATCGATGAGGAGAAGTTTCG.................2511.001.00------------1.00--------------------------------
............................................................................................................................................GAGAAGGCCGGGGATTGCTG..........................................................................................2011.001.001.00--------------------------------------------
.....................................................................................................................................................................................................................ATCGATGAGGAGAAGCC....................171.000.00-------------------1.00-------------------------
................................................................................................................................................AGGCCGGGGATTGCTGAGA.......................................................................................191.000.00-----------------------------1.00---------------
..............................................................................................CGGAAGATGGGGGGGTA...........................................................................................................................................171.000.00---------------------------1.00-----------------
.............................................................................................................................................AGAAGGCCGGGGATTGCTGTG........................................................................................2111.001.00-1.00-------------------------------------------
..............................................................................................CGGAAGATGGGGGGGGGG..........................................................................................................................................1820.500.50--------------------------------------------0.50
....................................................................................................................................ACAGGACTGAGAAGGC......................................................................................................1640.250.25--------------0.25------------------------------

Antisense strand
AGGGATGACATCAGAGCTAAAGTCATAGGAAGGTCACTCTGCTAGAGAGCCAGCCAGAACAGGGTGTTCAGAAAGGTGGCAGAAGACAGTCCCTCGGAAGATGGGGGGGGGGGGGGGCGACACCCATAGCTCACAGGACTGAGAAGGCCGGGGATTGCTGAGGTCAGCTGCTGTGCTCAGTGCCTTCCCTTCCTTCACAGACACTTCATCATCATCGATGAGGAGAAGTTTCGGGAGATTTGGCTGATGA
..........................................................................................................................................(((.(((((..(((((..((((((..(((...)))..))))))...)))))..))))).)))..................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR206941(GSM723282)
other. (brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR206942(GSM723283)
other. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
..........................................................................................................................................................TTGCTGAGGTCAGCTAGC.............................................................................. 181.000.00----------------1.00----------------------------
..............................................GAGCCAGCCAGAACAGACA......................................................................................................................................................................................... 191.000.00-------------1.00-------------------------------
............................................................................................................................................................................................................TTCATCATCATCGATAAAA........................... 191.000.00---------------------------------1.00-----------
.................................................................................................................................................................GGTCAGCTGCTGTGCGC........................................................................ 171.000.00----------1.00----------------------------------
..........................................................................................................................................................................CTGTGCTCAGTGCCTGGA.............................................................. 181.000.00---------1.00-----------------------------------
.....................................................................................................................................................................................................CAGACACTTCATCATCATCGATGAGGA.......................... 2711.001.00---------------------------------------1.00-----
.................................................................................................................................................................................CAGTGCCTTCCCTTCCTGT...................................................... 191.000.00-------------------------1.00-------------------
...........................................................................................................................................TGAGAAGGCCGGGGACC.............................................................................................. 171.000.00-----------------1.00---------------------------
....................................................GCCAGAACAGGGTGTGCCT................................................................................................................................................................................... 191.000.00------------------1.00--------------------------