ID: uc008nme.9
GENE: Rbm12(6)
chr2:155904108-155904359-


(1)
AGO.mut 		(2)
AGO1.ip 		(7)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(20)
BRAIN 		(4)
CELL-LINE 		(2)
DCR.mut 		(13)
EMBRYO 		(4)
ESC 		(7)
FIBROBLAST 		(1)
HEART 		(3)
LIVER 		(1)
LUNG 		(3)
LYMPH 		(11)
OTHER 		(5)
OTHER.mut 		(4)
PIWI.ip 		(2)
PIWI.mut 		(4)
SKIN 		(6)
SPLEEN 		(20)
TESTES 		(1)
THYMUS 		(3)
TOTAL-RNA 		(2)
UTERUS

Sense strand
AGTTCTTCCGGCAAGGCGATGGGAAGTGGCAGCTGGCATACAGAACCGAGGTGACTCCTGGTGTCAGGTGGCTTGGCAGAGGAGAGAGACTGCAGGGGTTGGGATTAGCAAGTTTGGGAACCGAGAGAAAAAGCCTGTTGGTGGGTAGAGCGGTGGGAGCTCTTCATGGGCCAGACCAGAGGTCTCTACTCTCCACCCCCAGGTAGTCAAGAACAACCTGAACCCTACCTGGAAGCGCTTCTCAGTCTCTCT
..........................................................................................................................................(((.((((.(((.(((((((.(((....(((......)))))).)).)))))))).)))))))...................................................
........................................................................................................................................137..............................................................202................................................
SizePerfect hitTotal NormPerfect NormSRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR028731(GSM400968)
Mili-wt-associated. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR037922(GSM510460)
e12p5_rep4. (embryo)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR206942(GSM723283)
other. (brain)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR553586(SRX182792)
source: Testis. (testes)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		mjTestesWT2()
Testes Data. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR306541(GSM750584)
19-24nt. (ago2 brain)
.................................TGGCATACAGAACCGAG..........................................................................................................................................................................................................17148.0048.0038.002.003.00--------------------------------------------------------------------1.00-----------------1.00---1.00----------1.001.00----
................................CTGGCATACAGAACCGAG..........................................................................................................................................................................................................18132.0032.0016.002.003.00---1.00---1.00----1.00-1.00----2.00------1.00---1.00------1.00------------2.00--------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCT.........................................................................................22117.0017.00-1.00-----3.00---1.00-2.00-1.00--2.00-----3.001.00-1.00-------1.00----------------------------------------------------1.00---------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCTCT.........................................................................................2519.009.00--------1.00--2.001.00-1.00---------------1.00----1.00--------------1.00----------------------------------------------------1.00------
...............................GCTGGCATACAGAACCGAG..........................................................................................................................................................................................................1919.009.003.003.00-1.00-1.00--------------------------------------------------------------------------------1.00-----------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCT...........................................................................................2017.007.00-----------------------3.00----2.00--------1.00------------------------------------------------------1.00-----------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCTAT.......................................................................................2416.0017.00-------1.00---1.00-----1.00------------1.00-------------------------1.00--------------------------------------1.00--------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAG.............................................................................................2116.006.00---2.00--1.00-----1.00----------------------1.00---------------------1.00----------------------------------------------------
...................................................................................................................................................................................AGGTCTCTACTCTCCACCCCCAGT.................................................245.000.00--------4.00----------------------------------------------------------------------1.00------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTC..........................................................................................2115.005.001.00----------------1.00---------------1.00------------------2.00---------------------------------------------------------
...................................................................................................................................................................................AGGTCTCTACTCTCCACCCCCAGA.................................................244.000.00------------------------------------3.00-----------------------------------------------------------------------1.00-
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCTCA.........................................................................................2514.001.00-------------------4.00------------------------------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCT...........................................................................................2314.004.00------------1.00------------------------------------1.00------1.00-------------------1.00---------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCTAA.......................................................................................2414.0017.00-------------3.00----------------1.00-------------------------------------------------------------------------------
.................................TGGCATACAGAACCGAGA.........................................................................................................................................................................................................1814.0048.00-2.00--------------------------------------1.00-1.00-------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGGAG.............................................................................................2214.004.00---1.00-1.00----1.00-------1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGA..............................................................................................2013.003.00---1.00--------------------------------------------1.00--------------1.00----------------------------------------------
...................................................................................................................................................................................................................AACAACCTGAACCCTACCTGGAAGCGC..............2713.003.00---------1.00---------------------1.00---------------------------------------------1.00--------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCATTT......................................................................................2513.005.00---1.00-------------------------------------------------------1.00-----1.00--------------------------------------------
.................................................................................................................................................................................................................................TACCTGGAAGCGCTTCTCAGTCTCTCT2713.003.00----1.00------------------------------------1.00-------------------------------1.00------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGG...............................................................................................1913.003.00-----1.001.00------------------------------------------1.00------------------------------------------------------------
..................................................................................................................................................................................................................GAACAACCTGAACCCTACCTGGAAGCGC..............2813.003.00----2.00----------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGGAGC............................................................................................2313.003.00----------------------1.00----------------------------------1.001.00---------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTG.................................................................................................1813.003.00----------1.00--------------------------1.00-----------------------------1.00------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAG.............................................................................................1812.002.00----------1.00-----------------------------------------------1.00---------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGAATT.........................................................................................2512.006.00---------------------------------------------2.00----------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCTA........................................................................................2312.0017.00-------1.00---------1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTAT.........................................................................................2212.007.00-----1.00------------------------------------------------------------1.00-------------------------------------------
............................................................................................................................................GTGGGTAGAGCGGTGGGAGCTCT.........................................................................................2312.002.00--------------1.00------------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAACCCTACCTGGAAGCGCTTCTCAG.......2712.002.00---------2.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGGAGCTC..........................................................................................2512.002.00------------1.00------------------------------------------------------------------------------1.00------------------
....................................................................................................................................GCCTGTTGGTGGGTAGAGCG....................................................................................................2012.002.00--------------------------------2.00-----------------------------------------------------------------------------
................................................................................................................................................................................................................AAGAACAACCTGAACCCTACCTGGAAGC................2812.002.00--------------------------------------------2.00-----------------------------------------------------------------
..............................................................................................................................................GGGTAGAGCGGTGGGC..............................................................................................162.000.00-------------------------------------------------------------1.00--1.00---------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTAA................................................................................................192.000.00----------------1.00---------------------------------------------1.00-----------------------------------------------
...................................GCATACAGAACCGAG..........................................................................................................................................................................................................1512.002.00-----------------------------------------------1.00---1.00----------------------------------------------------------
.................................................................................................................................................................................................................AGAACAACCTGAACCCTACCTGGAAGCGC..............2912.002.00----1.00--------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTATAT.......................................................................................2412.007.00--------------------1.00------------------------------------------------------------------1.00----------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGTTT..........................................................................................2412.006.00--------------------------------------1.00---------1.00-------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCTAG.........................................................................................2512.004.00---2.00----------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGGGTAGAGCGGTGGGAGCT...........................................................................................2112.002.00-----1.00--------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................................GGTCTCTACTCTCCACCCCCAGT.................................................232.000.00---------------------------------------------------------------------1.00-------------1.00--------------------------
.......................................................................................................................................TGTTGGTGGGTAGAGCGGTGGGAG.............................................................................................2412.002.00---------------------------------------2.00----------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAAA............................................................................................2211.003.00-------------------------1.00------------------------------------------------------------------------------------
.........................GTGGCAGCTGGCATACAGAACCGAG..........................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------1.00------------------------
...................................................................................................................................................................................AGGTCTCTACTCTCCACCCACAG..................................................231.000.00------------------------------------------------------------------------------------------1.00-------------------
..................................................................................................................................................................................................................GAACAACCTGAACCCTACCTGGAAGC................2611.001.00------------------------------------------------------1.00-------------------------------------------------------
.................................TGGCATACAGAACCG............................................................................................................................................................................................................1511.001.00-----------------------------------------------1.00--------------------------------------------------------------
.......................AAGTGGCAGCTGGCATACAGAACCGAG..........................................................................................................................................................................................................2711.001.001.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGT............................................................................................2211.006.00-------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGGAGCTA..........................................................................................251.000.00-----------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGTCTCTACTCTCCACCCCCAT..................................................231.000.00----------------------------------------------------------------------------------------------1.00---------------
..........................................................................................................................................TGGTGGGTAGAGCGGTTGG...............................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAACCCTACCTGGAAGCGCTTCTCAGTC.....2911.001.00-------------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTTATT.......................................................................................2411.007.00--------------1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TACCTGGAAGCGCTTCTCA........1911.001.00--1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GGTCTCTACTCTCCACCCCCATTTT...............................................251.000.00--------------1.00-----------------------------------------------------------------------------------------------
........................................................................................................................................GTTGGTGGGTAGAGCGGT..................................................................................................1811.001.00---------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGGAGCTCAT........................................................................................2711.002.00------------------------------------------------------------------------1.00-------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAAAT...........................................................................................2311.003.00------------------1.00-------------------------------------------------------------------------------------------
..........................TGGCAGCTGGCATACAGAACCGA...........................................................................................................................................................................................................2311.001.00------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTTA.........................................................................................2211.007.00--------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAACCCTACCTGGAAGCGCTTCTCAGT......2811.001.00----1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCTTA.......................................................................................241.000.00--------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAACCCTACCTGGAAGCGCTTCTCAGTCT....3011.001.00---------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AACAACCTGAACCCTACCTGGAAGCGCTT............2911.001.00----1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCAAG.........................................................................................221.000.00-------------------------------------------------------1.00------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTT..........................................................................................2111.007.00--------------------------------------------------------------------------------1.00-----------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGGAGAA...........................................................................................2411.004.00-----------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGT................................................................................................181.000.00----------------------------------1.00---------------------------------------------------------------------------
...............................GCTGGCATACAGAACCGAGGTG.......................................................................................................................................................................................................2211.001.00-------------------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................AAGAACAACCTGAACCCTACCTGGAAGCGC..............3011.001.00---------1.00----------------------------------------------------------------------------------------------------
................................CTGGCATACAGAACCGTGA.........................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------1.00-------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCAA........................................................................................2311.005.00---------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GAACAACCTGAACCCTACCTGGAAGCGCT.............2911.001.00---------------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTAAA...............................................................................................201.000.00----------------------------------------1.00---------------------------------------------------------------------
..........................................................................................................................................................................................................GTAGTCAAGAACAACCTGAACCCTACCTGGAAGC................3411.001.00--------------------------------1.00-----------------------------------------------------------------------------
................................................................................................................................................................................................................AAGAACAACCTGAACCCTACCTGGAAGCGCTTC...........3311.001.00----------------------------------------------------------------------------------------------------1.00---------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCTC..........................................................................................2411.001.00-------------------------------------------------------1.00------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCTAAT......................................................................................2511.0017.00------------------------------------------------------------------------------------------------------1.00-------
...............................GCTGGCATACAGAACCGA...........................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------------------1.00--
....................................................................................................................................................................................................................................CTGGAAGCGCTTCTCAGTCTTT..221.000.00---------------------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................................................................................................ACCTGAACCCTACCTGGAAGCGCTTCTCT........291.000.00--------------------------1.00-----------------------------------------------------------------------------------
......................................................................................AGACTGCAGGGGTTGAG.....................................................................................................................................................171.000.00---------------------------------------------------------------------------------1.00----------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCTCAT........................................................................................2611.001.00--------------------------------------------------------------------------1.00-----------------------------------
...........................................................................................................................................GGTGGGTAGAGCGGTGGGAGCTC..........................................................................................2311.001.00------------------------------------------------------------1.00-------------------------------------------------
......TCCGGCAAGGCGATGGGAAGTGGC..............................................................................................................................................................................................................................2411.001.00--1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCATTC......................................................................................2511.005.00-----------------------------------------------------------1.00--------------------------------------------------
............................................................................................................................................................................................................AGTCAAGAACAACCTGAACCCTACCTGGAAGCG...............3311.001.00------------------------------------------------------1.00-------------------------------------------------------
..................................................................................................................................................................................................................GAACAACCTGAACCCCGG........................181.000.00------------------------------------------------------------------------------------1.00-------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGTAAT...........................................................................................2311.003.00-----1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGAT...............................................................................................2011.003.00----------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGATAA...........................................................................................201.000.00------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGAA..............................................................................................201.000.00-----------------------------1.00--------------------------------------------------------------------------------
...............................GCTGGCATACAGAACCGAGGTAGTC....................................................................................................................................................................................................251.000.00--1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CCTGAACCCTACCTGGAAGCGCTTCTC.........2711.001.00----1.00---------------------------------------------------------------------------------------------------------
...........................................................................GCAGAGGAGAGAGACTGCAGGGG..........................................................................................................................................................2311.001.00---------------------------------1.00----------------------------------------------------------------------------
.................................TGGCATACAGAACCGCG..........................................................................................................................................................................................................1711.001.001.00-------------------------------------------------------------------------------------------------------------
...................TGGGAAGTGGCAGCTGGCATACAGAACC.............................................................................................................................................................................................................2811.001.00--------------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAACCCTACCTGGAAGC................1811.001.00----------------------------------------------------------------------------------------------------------1.00---
.............................................................................................................................................TGGGTAGAGCGGTGGGAGTTT..........................................................................................2111.002.00--------------------------------------1.00-----------------------------------------------------------------------
.........................................................................................................................................................................................CTACTCTCCACCCCCATCT................................................191.000.00--------1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCAAGAACAACCTGAACCCTACCTGG....................2611.001.00--------------------------------------------------------------------------------------------------1.00-----------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGAT..............................................................................................211.000.00-----------------------------------------------------------------------------------------------------1.00--------
................................CTGGCATACAGAACCGAT..........................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------1.00---------------------------
...........................................................................................................................................GGTGGGTAGAGCGGTGGGAAAT...........................................................................................221.000.00------------------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCTTT.........................................................................................2511.004.00------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................GGGTAGAGCGGTGGGAGCTCTAA.......................................................................................231.000.00--------------------------------------------------------------------1.00-----------------------------------------
..............GGCGATGGGAAGTGGCAGGTG.........................................................................................................................................................................................................................211.000.00-------------------------------------------1.00------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGAAA................................................................................................191.000.00----------------------------1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................TAGTCAAGAACAACCTGAACC............................2111.001.00---------------------------------------------------1.00----------------------------------------------------------
.....................................................................................................................................................................................................................CAACCTGAACCCTACCTGGAAGCGCTT............2711.001.00---------------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................TTGGTGGGTAGAGCGGTGGGA..............................................................................................2111.001.00----------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCAATT........................................................................................231.000.00---------------------------------------------------------------------------------------------------1.00----------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGTC...........................................................................................2011.002.00-----1.00--------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTAA.........................................................................................2211.007.00----------------------------------------------------------------------1.00---------------------------------------
................................................................................................................................................................................................................AAGAACAACCTGAACCCTACCTGGAAGCGT..............301.000.00---------------------------------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................................................GAACAACCTGAACCCTACCTGGAAG.................2511.001.00---------------------1.00----------------------------------------------------------------------------------------
..................ATGGGAAGTGGCAGCTGGCT......................................................................................................................................................................................................................201.000.00-------------------------------------------------------------------------------------------------1.00------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGCTCTTT.......................................................................................241.000.00---------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................ACCTGGAAGCGCTTCTCA........1811.001.00-1.00------------------------------------------------------------------------------------------------------------
............................GCAGCTGGCATACAGAACCGAGGTAGT.....................................................................................................................................................................................................271.000.00--------------------------1.00-----------------------------------------------------------------------------------
.............................CAGCTGGCATACAGAACCGAG..........................................................................................................................................................................................................2111.001.00----------------------------------1.00---------------------------------------------------------------------------
.....TTCCGGCAAGGCGATGGGAAGTGGCA.............................................................................................................................................................................................................................2611.001.00--1.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGGGTAGAGCGGTGGGAG.............................................................................................1911.001.00------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CAACCTGAACCCTACCTGGAAGCGCTTC...........2811.001.00----1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGGGAGCTA..........................................................................................2411.004.00--------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTGTT...............................................................................................191.000.00----------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................TGGGTAGAGCGGTGGGAGT............................................................................................1911.002.00-------------------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCTACTCTCCACCCCCAGT.................................................211.000.00------------------------------------------------------------------------------------------------1.00-------------
.................................TGGCATACAGAACCGAGGTG.......................................................................................................................................................................................................2011.001.00------1.00-------------------------------------------------------------------------------------------------------
.............................................................................................AGGGGTTGGGATTAGGCG.............................................................................................................................................181.000.00----------------1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGAAGCGCTTCTCA........1520.500.50-------------------------------------------------------------0.50------------------------------------------------
....................................................................................................................................................AGCGGTGGGAGCTC..........................................................................................1450.200.20-------------------------------------------------------------0.20------------------------------------------------

Antisense strand
AGTTCTTCCGGCAAGGCGATGGGAAGTGGCAGCTGGCATACAGAACCGAGGTGACTCCTGGTGTCAGGTGGCTTGGCAGAGGAGAGAGACTGCAGGGGTTGGGATTAGCAAGTTTGGGAACCGAGAGAAAAAGCCTGTTGGTGGGTAGAGCGGTGGGAGCTCTTCATGGGCCAGACCAGAGGTCTCTACTCTCCACCCCCAGGTAGTCAAGAACAACCTGAACCCTACCTGGAAGCGCTTCTCAGTCTCTCT
..........................................................................................................................................(((.((((.(((.(((((((.(((....(((......)))))).)).)))))))).)))))))...................................................
........................................................................................................................................137..............................................................202................................................
SizePerfect hitTotal NormPerfect NormSRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR028731(GSM400968)
Mili-wt-associated. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR037922(GSM510460)
e12p5_rep4. (embryo)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR073954(GSM629280)
total RNA. (blood)		SRR206942(GSM723283)
other. (brain)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR553586(SRX182792)
source: Testis. (testes)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		mjTestesWT2()
Testes Data. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR306541(GSM750584)
19-24nt. (ago2 brain)
............................................................................................................................................GTGGGTAGAGCGGTGGGAG............................................................................................. 1911.001.00----------------------------------------------1.00---------------------------------------------------------------
...........................................................................................................................................GGTGGGTAGAGCGGTGGC............................................................................................... 181.000.00----------------------------------------------1.00---------------------------------------------------------------
..........................................................................................................................................TGGTGGGTAGAGCGGTC................................................................................................. 171.000.00--------------------------------------------------1.00-----------------------------------------------------------
........................................................................................................................................GTTGGTGGGTAGAGCGTGC................................................................................................. 191.000.00----------------1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CGCTTCTCAGTCTCTGTG 181.000.00-------------------------------------1.00------------------------------------------------------------------------
...................................................................................................................................................................................AGGTCTCTACTCTCCAC........................................................ 1720.500.50--------------------------------------------------------------0.50-----------------------------------------------
................................................................................................................................................................TCTTCATGGGCCAGA............................................................................. 1550.400.40-------------------------------------------------------------------------------------------------------------0.40
..........................................................................................................................................................................................................................................GCGCTTCTCAGTCT.... 14100.100.10-------------------------------------------------------------0.10------------------------------------------------