ID: uc008mja.10
GENE: Vps16(11)
chr2:130265604-130266016+


(1)
AGO.mut 		(2)
AGO1.ip 		(8)
AGO2.ip 		(6)
B-CELL 		(19)
BRAIN 		(1)
CELL-LINE 		(1)
DCR.mut 		(1)
DGCR8.mut 		(10)
EMBRYO 		(10)
ESC 		(4)
FIBROBLAST 		(1)
KIDNEY 		(3)
LIVER 		(3)
LYMPH 		(11)
OTHER 		(3)
OTHER.mut 		(1)
OVARY 		(2)
PIWI.ip 		(2)
PIWI.mut 		(2)
SKIN 		(4)
SPLEEN 		(20)
TESTES 		(1)
THYMUS 		(1)
UTERUS

Sense strand
CCTCAATGGCCCCTGGAGCACTGCTGTTAGAGGCCCAGAAGGAATATGAGGTAATTTCCGGGCAACTTCTAAGATTCCCAAGATGCTCTCTTCCTTTCTCTTCTCTTGACTAGACCAGCCCTCTGCCCCTGCCTGAGCACCCATGATAAGCCAGGGGCTACCTGACAGGGGAGGGGGTTAGATAAGACACTGACTTGAGCTGGCTAAGGCTAGCACATGTAAACTGGCAGGGCTACCCTACTGTCCACAGGCTCAAGTTGGTGCTTTCCAAGACCTCTCCATTTGAACTATGTAGTCCCATGAGGCTGGGGACCAGAGTGAGACTGTCTGTGTAATGTTCCATCTCTGGGCCTCTCCCCACAGAAAGAGAGCCAGAAAGCAGATGAGTACCTGCGGGAGATCCAGGAACTGGG
............................................................................................................................................................................................................................................................................................................((.((..((((.((((((((..((............))..)).)))))).))))..)))).....................................................
.......................................................................................................................................................................................................................................................................................................296................................................................363................................................
SizePerfect hitTotal NormPerfect NormSRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR073955(GSM629281)
total RNA. (blood)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT1()
Testes Data. (testes)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		GSM475281(GSM475281)
total RNA. (testes)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR553586(SRX182792)
source: Testis. (testes)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)
............................................................................................................................................................................................................................................................................................................................................................................AAGAGAGCCAGAAAGCAG...............................18130.0030.0011.006.00---3.00-3.00-----3.00------1.00---------------------------2.00------------------------------------------1.00-----
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAGA..........................................................................................23123.0023.00---3.001.001.003.00-1.001.00-------4.00--2.00------------1.00----1.00--------1.00--1.00-1.00--1.00------------------------------------1.00----
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAGA..........................................................................................24117.0017.00---7.001.00-----2.002.00---------------------1.00--1.00-1.00-------------------------1.00-------------------1.00------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGAGATCCAGGATAGG..2010.000.00------------4.00--1.00--1.00-------------------------------------------------1.00------1.001.00---1.00----------------
.............................................................................................................................................................................................................................................................................................................................................................................AGAGAGCCAGAAAGCAG...............................1769.339.334.831.670.17--0.17-1.17----------------------------0.17--------------------------------------------1.00------------0.17--
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGA............................................................................................2117.007.00-----------1.00-----------1.00------------1.00-------2.00---------1.00--------------------------------1.00---------
..............................................................................................................................................................................................................................................................................................................AGGCTGGGGACCAGAGTGAGA..........................................................................................2116.006.00------2.00-1.00----------------1.00---------------1.00-----------------------1.00-------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAGAAT........................................................................................2616.0017.00-----------1.00--5.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACAGT.................................................2616.003.00--3.00-1.00----1.00---------------------------------------1.00-----------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGCTGGGGACCAGAGTGAGA..........................................................................................2215.005.00---------------2.00-------1.00-----1.00------------------------------------------------------------1.00------
..............................................................................................................................................................................................................................................................................................................AGGCTGGGGACCAGAGTGAGACT........................................................................................2314.004.00--------1.00----------------1.00------1.00----------------------------------------------1.00-----------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAG...........................................................................................2314.004.00--------1.00-----------------------1.00-1.00-----------------------------------------------------1.00--------
..........................................................................................................................................................................................................................................................................................................CATGAGGCTGGGGACCAGAGTGA............................................................................................2314.004.00----1.00-------------------------------------1.00--------------1.00--------------1.00------------------------
........................TGTTAGAGGCCCAGAAGGAATATGAGA..........................................................................................................................................................................................................................................................................................................................................................................274.000.00------------------------1.00---1.00-----------2.00--------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAG...........................................................................................2214.004.00-----1.002.00-------------------------------------------------------------------------------1.00----------
................................................................................................................................................................................................................................................................................................................GCTGGGGACCAGAGTGAGACTGA......................................................................................2314.001.00---------------------4.00---------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGA............................................................................................2214.004.00--------1.00----------1.00----------------------1.00-----------------------1.00------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCAC....................................................2314.004.00--2.00---------------1.00-------------1.00----------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACAG..................................................2513.003.00--1.00--------1.00-------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCA.....................................................2213.003.00---------------------------1.00---------------------------1.00-----------1.00-----------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAGT..........................................................................................2313.004.00----1.00-----------------------------------------2.00--------------------------------------------------
.........................GTTAGAGGCCCAGAAGGA..................................................................................................................................................................................................................................................................................................................................................................................1813.003.003.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................AAAGAGAGCCAGAAAGC.................................1722.502.500.500.50---1.00-0.50-----------------------------------------------------------------------------------------
.......................CTGTTAGAGGCCCAGAAGGA..................................................................................................................................................................................................................................................................................................................................................................................2012.002.00-2.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCCCATGAGGCTGGGGACCAGAGTGAGACTGTCTGTGTAATGTTCCATCTCTGGGCCTCTCCCCACAGT.................................................692.000.00---------------------------------------------------2.00---------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CATCTCTGGGCCTCTCCCCACAGAT................................................252.000.00--2.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGGCTGGGGACCAGAGTGAGAC.........................................................................................2212.002.00-----------------------------------------1.00--------1.00----------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACA...................................................2412.002.00--2.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................CTGGGGACCAGAGTGAGAC.........................................................................................1912.002.00----------1.00-----1.00--------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAGTA.........................................................................................2412.004.00-----------------------------------------------------2.00-------------------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAT...........................................................................................2312.004.00-----------------------------1.00-1.00-----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAGAT.........................................................................................2412.0023.00-------------------------1.00---------------------------------1.00-------------------------------------
..............GGAGCACTGCTGTTAGAG.............................................................................................................................................................................................................................................................................................................................................................................................1812.002.00-------------2.00-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGT............................................................................................222.000.00------------------1.00--------------------------------------------1.00---------------------------------
..............................................................................................................................................................................................................................................................................................................AGGCTGGGGACCAGAGTGAG...........................................................................................2012.002.00---------------2.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAT...........................................................................................2211.007.00---------------------------------------------1.00---------------------------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAGAT.........................................................................................2511.0017.00-------------------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCATTT...................................................241.000.00---------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................CATGAGGCTGGGGACCAGAGTGT............................................................................................231.000.00----------------------------------------------------------1.00--------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAGATGAGTACCTGCGGGAGA.............2611.001.00------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACAGAAAAT.............................................301.000.00-------------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................................................................................................................................................................................CATCTCTGGGCCTCTCCCCACATA.................................................2411.001.00----------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................AAAGAGAGCCAGAAAGCAGAT.............................2111.001.00----1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCAT....................................................2311.003.00----------------------------------1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................CCATGAGGCTGGGGACCAGAGT..............................................................................................2211.001.00----1.00--------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGGG...........................................................................................2211.001.00-----------------------1.00-------------------------------------------------------------------------
.CTCAATGGCCCCTGGAGCACTGC.....................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................TGTAAACTGGCAGGGCTACC................................................................................................................................................................................2011.001.00-------------------------------------------------1.00-----------------------------------------------
...........................................................................................................GACTAGACCAGCCCTCTGCCCCTGCC........................................................................................................................................................................................................................................................................................2611.001.00--------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAGACTGT......................................................................................2811.001.00----------------------------------------------------------------------------------1.00--------------
......................GCTGTTAGAGGCCCAGAAGGAAT................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCATT...................................................2411.003.00-------------------1.00-----------------------------------------------------------------------------
.....ATGGCCCCTGGAGCACTGCT....................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AAGAGAGCCAGAAAGCAGA..............................1911.001.00----1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCGGGAGATCCAGGAACTGGG2511.001.00----------------------1.00--------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGGCTGGGGACCAGAGTGAGACTTT......................................................................................2511.004.00---------------------------------------------1.00---------------------------------------------------
............................AGAGGCCCAGAAGGAAT................................................................................................................................................................................................................................................................................................................................................................................1741.001.00----0.25---0.50-0.25--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AGTACCTGCGGGAGATCCA.........1911.001.00---------------------------1.00---------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCTTT....................................................231.000.00---------------------------------1.00---------------------------------------------------------------
...........................TAGAGGCCCAGAAGGAATATGAGAA.........................................................................................................................................................................................................................................................................................................................................................................251.000.00-------------------------------------------1.00-----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACT...................................................2411.004.00------------------------1.00------------------------------------------------------------------------
.....ATGGCCCCTGGAGCACTGC.....................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACAT..................................................2511.002.00---------1.00---------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGGCTGGGGACCAGAGTGAGAA.........................................................................................2211.006.00-----------------------------1.00-------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAGATGAGTACCTGCGGGAGATC...........2811.001.00-----------------------------------------------------------------------------1.00-------------------
............................................................................................................................................................................................................................................................................................................................................................................................AGATGAGTACCTGCGGGAG..............1911.001.00-----1.00-------------------------------------------------------------------------------------------
..............GGAGCACTGCTGTTAGAGGC...........................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................GCTGGGGACCAGAGTGAGACTG.......................................................................................2211.001.00---------------------------------------1.00---------------------------------------------------------
..........................TTAGAGGCCCAGAAGGAA.................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CATCTCTGGGCCTCTCCCCATT...................................................221.000.00-------------------1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGAGATCCAGGATTGG..201.000.00---------------------------------------------------------------------1.00---------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAGAACAA......................................................................................2811.0017.00---------------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................AGAAAGAGAGCCAGAAAGCAGAT.............................2311.001.00----------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACAGA.................................................2611.001.00-----------------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAGAAA........................................................................................2511.0023.00-----------------------------------------------------------------------1.00-------------------------
...........................TAGAGGCCCAGAAGGAATATGAGAAA........................................................................................................................................................................................................................................................................................................................................................................261.000.00------------------------------1.00------------------------------------------------------------------
........................TGTTAGAGGCCCAGAAGGAATATGAGAT.........................................................................................................................................................................................................................................................................................................................................................................281.000.00----------------------------1.00--------------------------------------------------------------------
...............................................................................................................................................................ACCTGACAGGGGAGGCGC............................................................................................................................................................................................................................................181.000.00-------------------------------------1.00-----------------------------------------------------------
...............................................................................................................................................TGATAAGCCAGGGGCTACCTGACATAAA..................................................................................................................................................................................................................................................281.000.00-------------------------------------------1.00-----------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................GGGAGATCCAGGAACTGG.1811.001.00-----------------------------------------------------------------------------------1.00-------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGATA..........................................................................................2311.007.00----------------------------------------------------------------------1.00--------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACAAC.................................................2611.002.00-------------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TCTCTGGGCCTCTCCCCACAGTAT...............................................241.000.00----------------1.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................CCATGAGGCTGGGGACCAGAGTGA............................................................................................2411.001.00----------------------------------------------------1.00--------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCATTT..................................................2511.003.00---------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCACAGTA................................................2711.003.00--------------------------1.00----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTG.............................................................................................2011.001.00--------------------------------------------------------------------------1.00----------------------
..................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCGGGAGATCCAGG.......2011.001.00------------------------------------------------------------------------------1.00------------------
................................................................................................................................................................................................................................................................................................................GCTGGGGACCAGAGTGAGA..........................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00-------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCC......................................................2111.001.00----------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TCCATCTCTGGGCCTCTCCCCAAT...................................................2411.003.00----------------------------------1.00--------------------------------------------------------------
.....................TGCTGTTAGAGGCCCAGAAGGAATATGT............................................................................................................................................................................................................................................................................................................................................................................281.000.00----------------------------1.00--------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAGAAT........................................................................................2511.0023.00-------------------------------------------------------------1.00-----------------------------------
....................................................................................................................................................................................................................................................................................................................................................CATCTCTGGGCCTCTCCCCACA...................................................2211.001.00----------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGAGTGAGT..........................................................................................2411.004.00--------------------------1.00----------------------------------------------------------------------
..TCAATGGCCCCTGGAGCACTGCTGTTA................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................AGAGAGCCAGAAAGCAGATGA...........................2111.001.00-----------------------------------1.00-------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GAACTATGTAGTCCCATGAGGCT..........................................................................................................2311.001.00--------1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGAGGCTGGGGACCAGAGTGAGGAAC.......................................................................................2611.004.00--------------------1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGGCTGGGGACCAGAGTGA............................................................................................1911.001.00------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................TGAGTACCTGCGGGAGATCCAGG.......2311.001.00-------------------------------------------------------------------------------------1.00-----------
.........................................................................................................................................................................................................................................................................................................................................................................AGAAAGAGAGCCAGAAAGCAG...............................2111.001.001.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGCTGGGGACCAGAGTGA............................................................................................2011.001.00-----------------------1.00-------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CATCTCTGGGCCTCTCCCCACAG..................................................2311.001.00------------------------------------------------------------1.00------------------------------------
....................CTGCTGTTAGAGGCCCAGAAGG...................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----1.00-------------------------------------------------------------------------------------------
..................CACTGCTGTTAGAGGCCCAGAAGGAA.................................................................................................................................................................................................................................................................................................................................................................................2611.001.00------------------------------1.00------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CATCTCTGGGCCTCTCCCCAT....................................................211.000.00---------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................ATGAGGCTGGGGACCAGA................................................................................................1820.500.50---------------------------------------------------------------------------------------------0.50---
.............................................................................................................................................................................................................................................................................................................................................................................AGAGAGCCAGAAAGCAGAT.............................1920.500.50------------------------0.50------------------------------------------------------------------------
........................TGTTAGAGGCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................1590.110.11-----------------------------------------------------------------------------------------------0.11-
...........................................................................................................................................................................................................................................................................................................................................................................................................GGAGATCCAGGAACT...1590.110.11------------------------------------------------------------------------------------------------0.11

Antisense strand
CCTCAATGGCCCCTGGAGCACTGCTGTTAGAGGCCCAGAAGGAATATGAGGTAATTTCCGGGCAACTTCTAAGATTCCCAAGATGCTCTCTTCCTTTCTCTTCTCTTGACTAGACCAGCCCTCTGCCCCTGCCTGAGCACCCATGATAAGCCAGGGGCTACCTGACAGGGGAGGGGGTTAGATAAGACACTGACTTGAGCTGGCTAAGGCTAGCACATGTAAACTGGCAGGGCTACCCTACTGTCCACAGGCTCAAGTTGGTGCTTTCCAAGACCTCTCCATTTGAACTATGTAGTCCCATGAGGCTGGGGACCAGAGTGAGACTGTCTGTGTAATGTTCCATCTCTGGGCCTCTCCCCACAGAAAGAGAGCCAGAAAGCAGATGAGTACCTGCGGGAGATCCAGGAACTGGG
............................................................................................................................................................................................................................................................................................................((.((..((((.((((((((..((............))..)).)))))).))))..)))).....................................................
.......................................................................................................................................................................................................................................................................................................296................................................................363................................................
SizePerfect hitTotal NormPerfect NormSRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR073955(GSM629281)
total RNA. (blood)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT1()
Testes Data. (testes)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		GSM475281(GSM475281)
total RNA. (testes)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR553586(SRX182792)
source: Testis. (testes)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)
.....................................................................................................TCTCTTGACTAGACCATCC..................................................................................................................................................................................................................................................................................................... 191.500.00----------------1.00------------------0.50-------------------------------------------------------------
...................................................................................................................CAGCCCTCTGCCCCTTGAT....................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GCCTCTCCCCACAGAAGGG............................................. 191.000.00--------------------------------------------------------------1.00----------------------------------
.....................................................................................................TCTCTTGACTAGACCAGT...................................................................................................................................................................................................................................................................................................... 181.000.00----------------1.00--------------------------------------------------------------------------------
...................................................................................................................CAGCCCTCTGCCCCTTGTT....................................................................................................................................................................................................................................................................................... 191.000.00------------------1.00------------------------------------------------------------------------------
.................................................................................GATGCTCTCTTCCTTTAGAC........................................................................................................................................................................................................................................................................................................................ 201.000.00----1.00--------------------------------------------------------------------------------------------
.....................................................................................................TCTCTTGACTAGACCA........................................................................................................................................................................................................................................................................................................ 1620.500.50--------------------------------------------------------0.50----------------------------------------
......................................................................................................CTCTTGACTAGACCAG....................................................................................................................................................................................................................................................................................................... 1620.500.50-------------------------0.50-----------------------------------------------------------------------
.....................................................................................................TCTCTTGACTAGACCAT....................................................................................................................................................................................................................................................................................................... 170.500.00--------------------------------------------------------0.50----------------------------------------
.....................................................................................................TCTCTTGACTAGACC......................................................................................................................................................................................................................................................................................................... 1570.140.14--------------------------------------------------------0.14----------------------------------------