ID: uc008gja.16
GENE: Rps6ka4(1)
chr19:6914846-6915032-


(3)
AGO1.ip
(9)
AGO2.ip
(1)
AGO3.ip
(8)
B-CELL
(24)
BRAIN
(3)
CELL-LINE
(2)
DCR.mut
(2)
DGCR8.mut
(4)
EMBRYO
(6)
ESC
(2)
FIBROBLAST
(1)
KIDNEY
(1)
LIVER
(1)
LUNG
(4)
LYMPH
(19)
OTHER
(3)
OTHER.mut
(1)
PANCREAS
(6)
SKIN
(6)
SPLEEN
(11)
TESTES
(1)
THYMUS
(2)
UTERUS

Sense strand
AGACGAGGATGAGGACGAGGGCTGCGCCGTGGAGCTGCAGATCACCGAAGGTGGGTGCCGGATCCCGAGGCGGCTCTCCCGGACGGGTGGCAAGAGTCAGCGACCCTCTGGGCTCACTCGCCCCCCTGTGTCCGCAGCCAACCTCACCGGGCATGAGGAGAAGGTGAGCGTGGAGAACTTCGCGCTG
...............................................................................((((((((.(((..((((.(((..((....))))).))))))).)))...))))).....................................................
........................................................................73..............................................................137................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
mjTestesWT1()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR073954(GSM629280)
total RNA. (blood)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR073955(GSM629281)
total RNA. (blood)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
mjTestesWT4()
Testes Data. (testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR206940(GSM723281)
other. (brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR206939(GSM723280)
other. (brain)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
mjTestesWT3()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR206942(GSM723283)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesWT2()
Testes Data. (testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
.............................................................................CCCGGACGGGTGGCAAGAGTCAGC......................................................................................24142.0042.0033.00-1.00-2.00-----1.00----------------1.00---1.00---1.00---------------------1.00--------1.00---------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTCAG.......................................................................................23123.0023.005.00--2.00---2.00-2.002.00-1.00----3.00-----1.00------1.00---------1.002.00-------1.00--------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGTCAGC......................................................................................25116.0016.009.00------1.00---------------1.00----1.00-1.00-----1.00------------1.001.00-------------------------------------------------
....GAGGATGAGGACGAGGGCTGCGCCGTGG...........................................................................................................................................................28114.0014.00-14.00--------------------------------------------------------------------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGT..........................................................................................20111.0011.001.00-1.00---------1.00----------1.00--------------1.00------1.001.00------1.001.00------------1.00----------1.00---------------------
............................................................................TCCCGGACGGGTGGCAAGAGT..........................................................................................21110.0010.004.00-2.00---------1.00--1.00-----------------------------1.00-----------------------------------1.00------------------
............................................................................TCCCGGACGGGTGGCAAGAGTCAG.......................................................................................24110.0010.004.00--------------1.00----1.00-1.00----1.00-------------------1.00-------------------------------1.00--------------------
............................................................................TCCCGGACGGGTGGCAAGAGTC.........................................................................................2219.009.006.00-1.00-1.00----------------------1.00------------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGCA...................................................2318.008.00-1.00---2.00--3.00-------1.00------------------------------------------------------------------------1.00----------
.............................................................................CCCGGACGGGTGGCAAGAGTCAGA......................................................................................2416.0023.001.00--1.00--------------------------------------1.00---------------1.00----1.00----------1.00-------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGC....................................................2216.006.00--1.00--1.00--1.00------------------------1.00--------------------------------------------------1.00----------1.00----
....GAGGATGAGGACGAGGGC.....................................................................................................................................................................1816.006.00--1.00------1.00------------------2.00--1.00-----------1.00--------------------------------------------------------
.....AGGATGAGGACGAGGGCTG...................................................................................................................................................................1915.005.001.00-------------2.00----------1.00------------------------------------------1.00-------------------------------
...........AGGACGAGGGCTGCGCCG..............................................................................................................................................................1815.005.00------3.00-----------------2.00---------------------------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGTCAGT......................................................................................2515.0010.002.00--------1.001.00---------1.00-------------------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGCAT..................................................2415.008.00--------1.00-------2.00-----------------------------1.00------------------------1.00----------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTCAGT......................................................................................2415.0023.002.00-----------------------------------------1.00-1.00-------------------------------------------1.00-----------
.....AGGATGAGGACGAGGGCT....................................................................................................................................................................1815.005.00--------------3.00----------2.00--------------------------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGTCA........................................................................................2314.004.00---2.00------1.00------------------------------------------------------------------------1.00----------------
.............................................................................CCCGGACGGGTGGCAAGAGA..........................................................................................2014.001.00-------------------4.00--------------------------------------------------------------------------------
..ACGAGGATGAGGACGACGAC.....................................................................................................................................................................203.000.00-----------------------------3.00----------------------------------------------------------------------
..........GAGGACGAGGGCTGCGCCGT.............................................................................................................................................................2013.003.00-------------------------------------2.00---------1.00----------------------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTC.........................................................................................2113.003.00--1.00------------1.00------------------------1.00-----------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGCAGT.................................................253.000.00-----1.00----------------------------------------------1.00-----------------------1.00-----------------------
...............................GAGCTGCAGATCACCGAAGGT.......................................................................................................................................2113.003.00--------------------------3.00-------------------------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAG...........................................................................................2013.003.001.00--------1.00---------------------------------------------------1.00--------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGTCT........................................................................................2312.009.00-------1.00-------1.00------------------------------------------------------------------------------------
.GACGAGGATGAGGACGAGGGCTGC..................................................................................................................................................................2412.002.00---1.00----------------------------------------------------------------------------1.00-------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCC......................................................2012.002.00--------------------------------1.00---------------------------1.00---------------------------------------
..............................................................................CCGGACGGGTGGCAAGAGTCAG.......................................................................................2212.002.001.00---1.00-----------------------------------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGCT...................................................2312.006.00----------------1.00---1.00-------------------------------------------------------------------------------
..........................................................................................................................................................GAGGAGAAGGTGAGCGTGGAG............2112.002.00------------------------------------------------2.00---------------------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTCAGCAAAA..................................................................................2812.0042.00----2.00-----------------------------------------------------------------------------------------------
...............................................................................CGGACGGGTGGCAAGAGTCAGC......................................................................................2212.002.00----1.00--------------------------------------------------------------------------------------1.00--------
.............................................................................CCCGGACGGGTGGCAAGA............................................................................................1812.002.00----------------------1.00---------------------1.00-------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGATT..........................................................................................2111.001.00-----------------------------------------------------------1.00----------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGTCCG.......................................................................................2411.009.00--1.00-------------------------------------------------------------------------------------------------
.................AGGGCTGCGCCGTGGAGCTGCAGAT.................................................................................................................................................2511.001.00----------------------------------------------------------------------------------------------1.00-----
.GACGAGGATGAGGACGAGGGCTGCGCCG..............................................................................................................................................................2811.001.00---------------------------------------------------------------------1.00------------------------------
....................................................................................................................CTCGCCCCCCTGTGTCCGCAGT.................................................221.000.00-----1.00----------------------------------------------------------------------------------------------
..........................................................................TCTCCCGGACGGGTGGCAAGAGTCT........................................................................................251.000.00--------------------------------1.00-------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGCC...................................................2311.006.00-----------------------------------------------------------------------------1.00----------------------
...................................................................................................................ACTCGCCCCCCTGTGTCCGCA...................................................2111.001.00----------------1.00-----------------------------------------------------------------------------------
..................................................GTGGGTGCCGGATCCCGAGGCGGCTCTCCCGGACGGGTGGCAAGAGTCAGCGACCCTCTGGGCTCACTCGCCCCCCTGTGTCCGCCG..................................................871.000.00---------------------------------------------------------------------------------------1.00------------
.........................................................CCGGATCCCGAGGCGGACGC..............................................................................................................201.000.00--------------------1.00-------------------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGA....................................................2211.001.00-------------------------------------------------------------------------------------1.00--------------
..ACGAGGATGAGGACGAGGGCTGCG.................................................................................................................................................................2411.001.00------------------1.00---------------------------------------------------------------------------------
..........................CCGTGGAGCTGCAGATCACCGAAGCCA......................................................................................................................................271.000.00--------------------------------------------------------1.00-------------------------------------------
......................TGCGCCGTGGAGCTGCAGATCACCGAAGCC.......................................................................................................................................3011.001.00--------------------------------------------------------------1.00-------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTCAGTT.....................................................................................2511.0023.00-----------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................CGGGCATGAGGAGAAGG.......................1711.001.00---------------------------------------1.00------------------------------------------------------------
..................................................GTGGGTGCCGGATCCCGAGGCGGC.................................................................................................................2411.001.00------------------------------------------------------------------------------------------1.00---------
....GAGGATGAGGACGAGGG......................................................................................................................................................................1721.001.00-------------------------------------------------------------------------------------------------0.500.50-
.........TGAGGACGAGGGCTGCATAG..............................................................................................................................................................201.000.00---------------------1.00------------------------------------------------------------------------------
........................................................................................................................................................................CGTGGAGAACTTCGCGGC.181.000.00---------------------------------1.00------------------------------------------------------------------
......................TGCGCCGTGGAGCTGCAGATCACCGAAG.........................................................................................................................................2811.001.00--------------------------------------------------------------------------------------1.00-------------
.........................GCCGTGGAGCTGCAGATA................................................................................................................................................181.000.00------------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................TGAGGAGAAGGTGAGACCC...............191.000.00---------------------1.00------------------------------------------------------------------------------
...........................................................................................................................................AACCTCACCGGGCATGAGGAGA..........................2211.001.00-----------------------1.00----------------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGCATT.................................................2511.008.00-----1.00----------------------------------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCGCAGA.................................................251.000.00----------------------------------------------------------------------1.00-----------------------------
..............................................................................CCGGACGGGTGGCAAGAGTCT........................................................................................211.000.00-------1.00--------------------------------------------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGA............................................................................................1911.001.00------1.00---------------------------------------------------------------------------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTCCG.....................................................2111.001.00--------------------------------1.00-------------------------------------------------------------------
...........AGGACGAGGGCTGCGCCC..............................................................................................................................................................181.000.00----------------------------------1.00-----------------------------------------------------------------
...........................CGTGGAGCTGCAGATCACCGAAGGTGGG....................................................................................................................................2811.001.00------------------1.00---------------------------------------------------------------------------------
.............................TGGAGCTGCAGATCACCC............................................................................................................................................181.000.00------1.00---------------------------------------------------------------------------------------------
...........AGGACGAGGGCTGCGCAG..............................................................................................................................................................181.000.00------------------------1.00---------------------------------------------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAG...........................................................................................1911.001.00---------------1.00------------------------------------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGA..........................................................................................2111.003.00--1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................ACCGGGCATGAGGAGAAGGT......................2011.001.00------------------------------1.00---------------------------------------------------------------------
............................GTGGAGCTGCAGATCACCGAAG.........................................................................................................................................2211.001.00-----------------------------------1.00----------------------------------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTCAAC......................................................................................241.000.00-------------------------------1.00--------------------------------------------------------------------
................GAGGGCTGCGCCGTGGAG.........................................................................................................................................................1811.001.00--1.00-------------------------------------------------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGTAA........................................................................................2311.0010.00--1.00-------------------------------------------------------------------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTGGGC......................................................................................2411.0011.001.00---------------------------------------------------------------------------------------------------
........................................................................................................................................................ATGAGGAGAAGGTGAGCGTG...............2011.001.00---------------------------------------------------------------------------1.00------------------------
.................................................................................................................TCACTCGCCCCCCTGTGTC.......................................................1911.001.00---------------------------------1.00------------------------------------------------------------------
.....AGGATGAGGACGAGGGCTGCGC................................................................................................................................................................2211.001.00-------------------------------------------1.00--------------------------------------------------------
.............................TGGAGCTGCAGATCACCG............................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------1.00-------
................................................AGGTGGGTGCCGGATT...........................................................................................................................161.000.00---------------------1.00------------------------------------------------------------------------------
...CGAGGATGAGGACGAGGGCTGC..................................................................................................................................................................2211.001.00--1.00-------------------------------------------------------------------------------------------------
..............................................................................CCGGACGGGTGGCAAGAG...........................................................................................1811.001.00------------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................AGGAGAAGGTGAGCGTGGAGAA..........2211.001.00-----------------------------------------------------------------1.00----------------------------------
............................................................GATCCCGAGGCGGCTCGCT............................................................................................................191.000.00------------------------------------------------------------------------1.00---------------------------
.............................................................................CCCGGACGGGTGGCAAGAGTTAGC......................................................................................2411.0011.001.00---------------------------------------------------------------------------------------------------
.............................TGGAGCTGCAGATCACCGA...........................................................................................................................................1911.001.00----------------------------------------------------------------1.00-----------------------------------
........................................................................GCTCTCCCGGACGGGCGC.................................................................................................181.000.00---------------------------------------------------------------------------------------------1.00------
.................AGGGCTGCGCCGTGGC..........................................................................................................................................................161.000.00---------------------1.00------------------------------------------------------------------------------
............................................................................TCCCGGACGGGTGGCAAGAGTCAGCTTTT..................................................................................2911.0016.00---1.00------------------------------------------------------------------------------------------------
....GAGGATGAGGACGAGGGCAA...................................................................................................................................................................2011.006.00----------------------------------1.00-----------------------------------------------------------------
..........................................................................TCTCCCGGACGGGTGGCAAG.............................................................................................2011.001.00------------------1.00---------------------------------------------------------------------------------
.....AGGATGAGGACGAGGGCTGC..................................................................................................................................................................2011.001.00---------------------------------------1.00------------------------------------------------------------
.............................................................................CCCGGACGGGTGGCAAGAGAAA........................................................................................2211.001.00----------------------1.00-----------------------------------------------------------------------------
...CGAGGATGAGGACGAGGG......................................................................................................................................................................1820.500.50------------------------0.50---------------------------------------------------------------------------
..........................................................CGGATCCCGAGGCGG..................................................................................................................1530.330.33---------------------------------------------------------------------------------------------------0.33
............................GTGGAGCTGCAGATCA...............................................................................................................................................1670.290.29------------------------------------0.14--------------0.14------------------------------------------------

Antisense strand
AGACGAGGATGAGGACGAGGGCTGCGCCGTGGAGCTGCAGATCACCGAAGGTGGGTGCCGGATCCCGAGGCGGCTCTCCCGGACGGGTGGCAAGAGTCAGCGACCCTCTGGGCTCACTCGCCCCCCTGTGTCCGCAGCCAACCTCACCGGGCATGAGGAGAAGGTGAGCGTGGAGAACTTCGCGCTG
...............................................................................((((((((.(((..((((.(((..((....))))).))))))).)))...))))).....................................................
........................................................................73..............................................................137................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
mjTestesWT1()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR073954(GSM629280)
total RNA. (blood)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR073955(GSM629281)
total RNA. (blood)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
mjTestesWT4()
Testes Data. (testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR206940(GSM723281)
other. (brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR206939(GSM723280)
other. (brain)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
mjTestesWT3()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR206942(GSM723283)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesWT2()
Testes Data. (testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
...........................................................GGATCCCGAGGCGGCAAA.............................................................................................................. 184.000.00-----------2.00-2.00--------------------------------------------------------------------------------------
...........................................................GGATCCCGAGGCGGCACA.............................................................................................................. 184.000.00-----------1.00-3.00--------------------------------------------------------------------------------------
...................................................................................................................................CCGCAGCCAACCTCACCGGGCATGA............................... 2511.001.00---------------------------------------------------1.00------------------------------------------------
........................................................................................................................CCCCCCTGTGTCCGCAGCCAACCT........................................... 2411.001.00----------------------------------------------------------------------------------1.00-----------------
...............................................................................................................................GTGTCCGCAGCCAACCTCACCGGGC................................... 2511.001.00----------------------1.00-----------------------------------------------------------------------------
...........................................................GGATCCCGAGGCGGCCCA.............................................................................................................. 181.000.00-----------1.00----------------------------------------------------------------------------------------
....................................................................................................................CTCGCCCCCCTGTGTCCGCA................................................... 2011.001.00------------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................GCAGCCAACCTCACCGGGCATGA............................... 2311.001.00------------------------------------1.00---------------------------------------------------------------
..........................................................CGGATCCCGAGGCGGCAA............................................................................................................... 181.000.00-----------1.00----------------------------------------------------------------------------------------
.....................................................GGTGCCGGATCCCG........................................................................................................................ 1420.500.50------------------------------------------------------------------------------------------------0.50---