ID: uc008gik.10
GENE: Sf1(11)
chr19:6374559-6374768+


(1)
AGO.mut 		(15)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(29)
BRAIN 		(9)
CELL-LINE 		(3)
DCR.mut 		(2)
DGCR8.mut 		(12)
EMBRYO 		(11)
ESC 		(3)
FIBROBLAST 		(3)
HEART 		(2)
KIDNEY 		(13)
LIVER 		(1)
LUNG 		(2)
LYMPH 		(15)
OTHER 		(8)
OTHER.mut 		(1)
PANCREAS 		(1)
PIWI.mut 		(3)
SKIN 		(5)
SPLEEN 		(19)
TESTES 		(2)
THYMUS 		(8)
TOTAL-RNA

Sense strand
GGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGCCTGCATCAAGGAAAAGGTAATGCTGCTTACTCTCTTGGGATCTCTGTCTAGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAGGTATGATGCCGCCGCCGCCTATGGGCATGATGCCGCCGCCTCCGCCACCT
.............................................................................................((.....((((....((.(((((..((((..((....))..))))..))))).))....))))))....................................................
.............................................................................................94................................................................160................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverWT2()
Liver Data. (liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR206940(GSM723281)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR206939(GSM723280)
other. (brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		mjLiverWT3()
Liver Data. (liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR073954(GSM629280)
total RNA. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR206942(GSM723283)
other. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR206941(GSM723282)
other. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM510444(GSM510444)
brain_rep5. (brain)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		mjTestesWT2()
Testes Data. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM416732(GSM416732)
MEF. (cell line)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGT.................................................231252.00211.0048.0023.0010.0011.005.0021.0010.003.003.007.003.003.004.002.005.005.003.003.003.00-3.001.00--2.00-3.00-2.00-2.001.003.005.00--1.003.003.004.002.00-3.001.00---1.001.001.00-3.00-1.00-1.001.001.001.001.00---2.002.00-1.00--1.00---2.001.00-2.00-2.001.00-------1.001.00----1.00--------1.00---1.001.00--1.001.001.00--1.00---1.00---1.00-1.00---1.00------1.00---
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAG..................................................221211.00211.0024.0024.0013.0017.0015.00-4.007.00-3.003.005.002.007.001.00-6.004.002.00-4.004.001.005.002.00-2.00-2.002.00-1.001.00--3.001.00-1.00--4.00-3.00-3.00--2.00-2.00--1.002.002.001.001.001.002.001.00-1.00--1.00---1.001.00-1.00-1.00--2.00-1.001.001.001.00--1.00--1.00-1.00------------1.00-1.00--1.001.00----------------------------1.00-
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGA.................................................23154.00211.005.003.003.001.001.001.002.00-11.00-1.001.002.001.00--1.00-2.00-1.00-1.002.001.00--2.00---1.00----1.00---------3.001.00--------------2.00---------1.00---------1.00-------------------------------------------1.00-------1.00-----
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCA...................................................21112.0012.001.00---1.00-1.00-------1.001.00---------3.00---1.00-1.00-------------------------------------------1.00--------------1.00-------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTT................................................24111.00211.00-1.002.001.00----------------------------1.00----1.00------1.00-----------------------------------------2.00---------------------------1.00-----------------1.00-------
...................................................................................AGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAG..................................................7718.008.00-------------------8.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGC....................................................2018.008.00-1.003.00----------1.00-------1.00-------1.00----------------------------------------1.00---------------------------------------------------------------------
................................GCCTGCATCAAGGAAAAG................................................................................................................................................................1817.007.00------1.00-------2.00---------------1.00----------------------------------------------------------------------------------1.00--------1.00------------1.00----
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAT..................................................2216.0012.001.00-----------------------------------------1.00-1.00------------1.00---------------------------------1.00--1.00---------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTAA...............................................2516.00211.00-----------1.00----------1.00-------------------------------------2.00-----------------------1.00-------------1.00-----------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTG.....................................................1915.005.00-------------1.00-----------------1.00-----------------------------------2.00---1.00--------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAA................................................2415.00211.00-1.00-----1.00------------------1.00-1.00-------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAGT.................................................2215.004.00----1.00------------------------------1.00----2.00------------------------------------------------------------------------------------------1.00--------
.........................................................................................................................................GACCCTGGTCTTACTGCCTGCAG..................................................2314.004.001.00-------------3.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGC.................................................2314.00211.00------1.00----------2.00--------------------------1.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAG..................................................2114.004.00------------------1.00--2.00-------------------------------------------------------------------------------------------------------------------1.00--
..................................................................................................TGGGGCTTCTAGCCCAGGACCC..........................................................................................2213.003.00---------------3.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAA..................................................2213.0012.00---------------------------------------------------------------------------------------1.00-----------------------------1.00---------------1.00------
...........................................................................................................TAGCCCAGGACCCTGCTCTCT..................................................................................2113.003.001.00---------------------2.00---------------------------------------------------------------------------------------------------------------------
.GGAAGTACGCCTGTGGGCTCT............................................................................................................................................................................................2112.002.00----------1.00-1.00-------------------------------------------------------------------------------------------------------------------------------
............TGTGGGCTCTGGGGTCTATCGC................................................................................................................................................................................2212.002.00-----------------1.00----------------------------------------1.00---------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAGA...............................................2512.00211.00----------------------------------2.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GATGCCGCCGCCGCCTATGGGCAT......................2412.002.00-------2.00------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAGAA................................................2312.004.00-------------------------2.00------------------------------------------------------------------------------------------------------------------
...............................................AAGGTAATGCTGCTTACTCTCTTGGGAT.......................................................................................................................................2812.002.00-------------------------------------------------2.00------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTTTT..............................................2612.00211.00-----------1.00------------------------------------------------------1.00-------------------------------------------------------------------------
.............................ATCGCCTGCATCAAGGAAAAGGT..............................................................................................................................................................2312.002.00---------1.001.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTTT...............................................2512.00211.00-----------1.00--------------------------------------------------------------------------------1.00-----------------------------------------------
..................................................................................TAGGACTGGGAGCAAATGGGGCTTC.......................................................................................................2512.002.00---------------------------2.00----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTAT...............................................2512.00211.00--1.00-------------------------------------------------------------------------------------------------------------------------1.00---------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTA................................................2411.00211.00-----------------------------------------------------------------------------------------------------1.00--------------------------------------
..GAAGTACGCCTGTGGGCTCTGGGG........................................................................................................................................................................................2411.001.00---------------------------1.00----------------------------------------------------------------------------------------------------------------
.......ACGCCTGTGGGCTCTGGGGACT.....................................................................................................................................................................................221.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAG..................................................2011.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................AGGACTGGGAGCAAAT...............................................................................................................1621.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCT......................................................1811.001.00------------------------------------------------------------------------------------------------------------------------1.00-------------------
..GAAGTACGCCTGTGGGCTCTGGGGTC......................................................................................................................................................................................2611.001.00-------------------------------------------------------------1.00------------------------------------------------------------------------------
.......ACGCCTGTGGGCTCTGGG.........................................................................................................................................................................................1811.001.00--------------------------------------------------1.00-----------------------------------------------------------------------------------------
.............GTGGGCTCTGGGGTCTATCGCCTGCA...........................................................................................................................................................................2611.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------
.....................TGGGGTCTATCGCCTGCATCAAGG.....................................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------------------------------1.00------------------
...............................................................................................................................................................GGTATGATGCCGCCGCCGC................................1911.001.00---------------------------------------------------------------------------------1.00----------------------------------------------------------
.....GTACGCCTGTGGGCTCTGGGGTCTAT...................................................................................................................................................................................2611.001.00------------------------------------1.00-------------------------------------------------------------------------------------------------------
....................................GCATCAAGGAAAAGGAGT............................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------------1.00-----------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAAA...............................................2511.00211.00-------1.00------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................ATGATGCCGCCGCCGCCTATGGGCAT......................2611.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................AAGGAAAAGGTAATGCTGCTTACTCTCTTGGGATA......................................................................................................................................351.000.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................TCTAGCCCAGGACCCTGCTCTCT..................................................................................2311.001.00-----------------------------------------------------------------------------------------1.00--------------------------------------------------
.......................................................................................................................................................................GCCGCCGCCGCCTATGGGCAT......................2111.001.00-----------------------------------------------------------------1.00--------------------------------------------------------------------------
...AAGTACGCCTGTGGGCTCTGGGGTCTATCG.................................................................................................................................................................................3011.001.00-------------------------------------------------------------------------------------1.00------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCACT.................................................2311.0012.001.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAAC...............................................2511.00211.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
................................................................................TCTAGGACTGGGAGCAAATGGG............................................................................................................2211.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAAA.................................................2311.0012.00----------------------------------------------------1.00---------------------------------------------------------------------------------------
...........................CTATCGCCTGCATCAAGGA....................................................................................................................................................................1911.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................TAGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAG..................................................7811.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................ATGGGGCTTCTAGCCCAGGACA...........................................................................................221.000.00----------------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTAATGCTGCTTACTCTCTTGGGATCT.....................................................................................................................................2711.001.00---------------------------------------------------------------------------------------------------1.00----------------------------------------
................................................................................................................................................GTCTTACTGCCTGCAG..................................................1611.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAG................................................2411.00211.001.00-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAGA.................................................2211.004.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGA....................................................2011.005.00----1.00---------------------------------------------------------------------------------------------------------------------------------------
............................TATCGCCTGCATCAAGGAAAAGGTATG...........................................................................................................................................................271.000.00----------------------------------------------------------------------------------------------------------------------------------1.00---------
............................................................................TCTGTCTAGGACTGGGA.....................................................................................................................1711.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCA...................................................2011.001.00---------------------------------------------------------------------------1.00----------------------------------------------------------------
......................................................................GGGATCTCTGTCTAGGACT.........................................................................................................................1911.001.00----------------------------------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................GGACCCTGGTCTTACTGCCTGCAG..................................................2411.001.00-------------------------------------------------------------------------------------------------------------------------------1.00------------
..................................................GTAATGCTGCTTACTCTCTTGGGAT.......................................................................................................................................2511.001.00-----------------------------------------------------------------------1.00--------------------------------------------------------------------
.........GCCTGTGGGCTCTGGGGTCT.....................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------------1.00-----------------------
......TACGCCTGTGGGCTCTGGGGTAT.....................................................................................................................................................................................231.000.00-------------------------------------------------------------------------------------------------1.00------------------------------------------
.GGAAGTACGCCTGTGGGCTCTGGGGTCTA....................................................................................................................................................................................2911.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GACCCTGGTCTTACTGCCTGCAGA.................................................2411.004.00----------------------------------------------------1.00---------------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAGTAT...............................................2311.001.00----------------------------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCTT..................................................2211.008.00---------1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAGT.................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
.....................TGGGGTCTATCGCCTGCATCAAG......................................................................................................................................................................2311.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------
....................CTGGGGTCTATCGCCTGCATCAAGGAA...................................................................................................................................................................2711.001.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------
..............................................................ACTCTCTTGGGATCTCTGTCTAGGACTGG.......................................................................................................................2911.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................ATGGGGCTTCTAGCCCAGGACCC..........................................................................................2311.001.00-------------------------------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................GTATGATGCCGCCGCCGCCTATGGGCATGATG..................3211.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-----------
.......................................................................GGATCTCTGTCTAGGACTGG.......................................................................................................................2011.001.00----------------------------------1.00---------------------------------------------------------------------------------------------------------
.....................................CATCAAGGAAAAGGTATGA..........................................................................................................................................................191.000.00--------------------------------------------------------1.00-----------------------------------------------------------------------------------
...................................................................................................................................GCCCAGGACCCTGGTCTTACTGCCTGCAG..................................................2911.001.00-----------------------------------------------------------------------------------------1.00--------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCATT.................................................2311.0012.00------------------------------1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCGGT.................................................2311.008.00------------------------------------------------------------------------------------------------1.00-------------------------------------------
............TGTGGGCTCTGGGGTCTATC..................................................................................................................................................................................2011.001.00------------------------------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................ATGCCGCCGCCTCCGC.....1611.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGCT................................................2411.00211.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAAT...............................................2511.00211.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
.......ACGCCTGTGGGCTCTGGGGTCT.....................................................................................................................................................................................2211.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................GACCCTGGTCTTACTGCCTGCAT..................................................231.000.00--------------------------------------------------------------------------------1.00-----------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTCAG...................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................TGGGGCTTCTAGCCCAGGACA...........................................................................................211.000.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
.............................................................................................................................................CTGGTCTTACTGCCTGCAGA.................................................201.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAGTAAT..............................................2411.001.00----------------------------------1.00---------------------------------------------------------------------------------------------------------
.....GTACGCCTGTGGGCTCTGGGGTCTATC..................................................................................................................................................................................2711.001.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------
......TACGCCTGTGGGCTCTGGGG........................................................................................................................................................................................2011.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ATGCCGCCGCCGCCTATGGGC........................2111.001.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------
...................................................................................AGGACTGGGAGCAAATGGGGCTTCTAG....................................................................................................2711.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
................................................................................TCTAGGACTGGGAGCAAA................................................................................................................1820.500.50-------0.50------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................TGCTCTCTAAAGCCCAGG........................................................................1820.500.50---------------0.50----------------------------------------------------------------------------------------------------------------------------
.................................CCTGCATCAAGGAAAAG................................................................................................................................................................1730.330.33-----------------------------------0.33--------------------------------------------------------------------------------------------------------
..................................CTGCATCAAGGAAAAG................................................................................................................................................................1640.250.25----------------------0.25---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGTCTTACTGCCTG.....................................................1640.250.25---0.25----------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGCCTGCATCAAGGAAAAGGTAATGCTGCTTACTCTCTTGGGATCTCTGTCTAGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAGGTATGATGCCGCCGCCGCCTATGGGCATGATGCCGCCGCCTCCGCCACCT
.............................................................................................((.....((((....((.(((((..((((..((....))..))))..))))).))....))))))....................................................
.............................................................................................94................................................................160................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverWT2()
Liver Data. (liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR206940(GSM723281)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR206939(GSM723280)
other. (brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		mjLiverWT3()
Liver Data. (liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR073954(GSM629280)
total RNA. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR206942(GSM723283)
other. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR206941(GSM723282)
other. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM510444(GSM510444)
brain_rep5. (brain)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		mjTestesWT2()
Testes Data. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM416732(GSM416732)
MEF. (cell line)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
....................................................................................................................ACCCTGCTCTCTAAAGTACA.......................................................................... 201.000.00----------------------------------------------------------------------------------------------------1.00---------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAG.................................................. 2211.001.00----------------------------------------------------------------------------------------------------------------------1.00---------------------
...................................................................................................................................................................TGATGCCGCCGCCGCC............................... 161.000.00-----------------------------------------------------------------------------------------------1.00--------------------------------------------
.......................................................................................................CTTCTAGCCCAGGACCCT......................................................................................... 1820.500.50---------------0.50----------------------------------------------------------------------------------------------------------------------------
........................................................................................................TTCTAGCCCAGGACCCT......................................................................................... 1720.500.50-------------------------------------------------------------------------------------------------------------------------------------------0.50