ID: uc008ghu.12
GENE: Atg2a(13)
chr19:6250218-6250462+


(1)
AGO.mut
(2)
AGO1.ip
(11)
AGO2.ip
(2)
AGO3.ip
(3)
B-CELL
(28)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(7)
EMBRYO
(6)
ESC
(2)
FIBROBLAST
(1)
HEART
(7)
LIVER
(1)
LUNG
(1)
LYMPH
(11)
OTHER
(7)
OTHER.mut
(2)
PIWI.ip
(2)
PIWI.mut
(5)
SKIN
(4)
SPLEEN
(1)
TDRD1.ip
(21)
TESTES
(1)
TOTAL-RNA

Sense strand
TGGCCCCCCAGCTCCTACCCGCCTGGAACTTACTTGCTCAGACCTGCAAGGTAATCCTGTCTAGGAAACAGCTGGGGTGGGCCCCAGGACAGGTGTCCCTTTTTATCCCAGGGACACGGATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAGGAATCTACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCC
...............................................................................................................................(((((((..((.....((((.((((((......((....))...))))))))))..))..))).))))..................................................
.........................................................................................................................122......................................................................195................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
mjTestesWT1()
Testes Data. (testes)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT4()
Testes Data. (testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR553582(SRX182788)
source: Brain. (Brain)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR206942(GSM723283)
other. (brain)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR206939(GSM723280)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR206940(GSM723281)
other. (brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR206941(GSM723282)
other. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGT.................................................22138.005.00-1.002.00-5.00------1.002.00----1.001.00-1.002.001.00---2.003.00------1.00---1.001.001.002.00----1.00---------1.00----------1.001.001.00-----1.00-1.00----1.00----1.00--------1.00----
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAGG............................................................................................27118.0018.00---5.00-6.00------------------2.00-------1.00----------------1.00-1.00--------------------------1.00------------------1.00---
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGA.................................................22115.005.0014.00-------------------1.00--------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGG..................................................................................................21110.0010.00------2.00-4.00-----------------------------1.00-----2.001.00-------------------------------------------------------
.........................................................................................................................................................GAAGAGGCAGCTATGAGGCCC.......................................................................2118.008.00---------2.00--1.00------------2.00---1.00-----------------1.00--1.00--------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAC...............................................................................................2416.006.00-----------1.00-2.00--------2.00-----------------------------1.00------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAG................................................................................................2316.002.00--6.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTT................................................2316.005.00-1.00--1.00-1.00------------------------------2.00----1.00----------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAG..................................................2115.005.00------1.00---------3.00---1.00--------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAG...................................................................................................2015.005.00-----------1.00------------------2.00-----------1.00-------------------------------------------------------1.00--
................................................................................................................................TGGGGGAGCAATGGTGAGGAACAGG............................................................................................2515.005.00---1.00---------------------------------------------------1.00------------------------1.00--------------1.00----1.00
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAA...............................................................................................2413.001.00----------3.00------------------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAGT............................................................................................2713.001.00---1.00---------------------------------------------------------1.00---------------------1.00-----------------
..........................................................................................................................................ATGGTGAGGAACAGGGAAGAGGC....................................................................................2313.003.00-2.00--------------------------------------------------------------------------1.00------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAGGAACAGG............................................................................................2613.003.00-------------------1.00------------------------------------------1.00---------1.00----------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTAT...............................................2413.005.00-2.00-----------------1.00---------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCATT.................................................2213.002.00---------------1.00---------------1.00----------------------------------1.00----------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTTT...............................................2413.005.00-1.00-----------------------------1.00-1.00-------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGATT...............................................................................................2413.002.00-------------1.00--------------------------------------------------------1.001.00-----------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAT...............................................................................................2412.001.00------------------1.00----------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................GTCCTTTCTGTCCCCTCCAGTTT...............................................232.000.00-1.00--1.00------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCA...................................................2012.002.00--------------2.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTA................................................2312.005.00---------------------------------------------------------------1.00---------------------1.00---------------
..............................................................................................................................TCTGGGGGAGCAATGGTGA....................................................................................................1912.002.00------------------------------------------------------------------------------------1.00-------1.00--------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGA.................................................................................................2212.002.00-----------1.00---------------------1.00-------------------------------------------------------------------
.......................................................................................................................ATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAG..................................................7612.002.00-------------------------------------------2.00---------------------------------------------------------
...........................................................................................................................................TGGTGAGGAACAGGGAAGAGGC....................................................................................2212.002.00------------------------------------2.00----------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAAA.................................................2211.002.00----1.00------------------------------------------------------------------------------------------------
.....................CCTGGAACTTACTTGCTCAGACCTGCA.....................................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------------------1.00------------
...................................................................ACAGCTGGGGTGGGCTGCG...............................................................................................................................................................191.000.00-------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAGG..................................................................................................2011.001.00--------------------------------------------------------------------------1.00--------------------------
................................................................................................................................................................................TCCTTTCTGTCCCCTCCAGTT................................................211.000.00-------------------------------------------------------------------------------1.00---------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACA..............................................................................................2511.001.00-----------------------------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................................GAAGATGGAGAGAAGCCACCA.....................2111.001.00----------------------------------------------------------------1.00------------------------------------
.........................................................................................................................GTGACTCTGGGGGAGCAATGGT......................................................................................................2211.001.00--------------------------------1.00--------------------------------------------------------------------
...............................................................................................................................................................GCAGCTATGAGGCCCTCGGA..................................................................201.000.00---------1.00-------------------------------------------------------------------------------------------
................................................................................................................................TGGGGGAGCAATGGTGAGGAC................................................................................................211.000.00------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................AATGGTGAGGAACAGGGAAGAGGCAGCTA...............................................................................2911.001.00-----------------------1.00-----------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAGGTT..........................................................................................2911.0018.00------------------------1.00----------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAG.............................................................................................2611.001.00-----------------1.00-----------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAT................................................................................................2311.002.00-----------------1.00-----------------------------------------------------------------------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCTCCAGT.................................................2411.001.00---------------------------------------1.00-------------------------------------------------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCTCCAG..................................................2311.001.00------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................ACGAAGATGGAGAGAAGCCACC......................2211.001.00-----------------------------1.00-----------------------------------------------------------------------
................................................................................................................................TGGGGGAGCAATGGTGAGGAAC...............................................................................................2211.001.00-----------------------------------------------------------------1.00-----------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTAA...............................................2411.005.00-------------------1.00---------------------------------------------------------------------------------
......................CTGGAACTTACTTGCTCAGACCTGCA.....................................................................................................................................................................................................2611.001.00------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................................................GCCCTGTCCTTTCTGTCCCCTCCAG..................................................2511.001.00---------------------------------------------1.00-------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCTGT.................................................221.000.00---------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................................ACGAAGATGGAGAGAAGCCA........................2011.001.00---------------------------------------------------------------------------------1.00-------------------
...........................................................................................................................................TGGTGAGGAACAGGGAAGAG......................................................................................2011.001.00-------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................ATGGAGAGAAGCCACCAGTCCCCT..............2411.001.00--------------------------1.00--------------------------------------------------------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAG...................................................................................................1911.001.00---------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAGGAACAGGA...........................................................................................2711.003.00---1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................GAAGAGGCAGCTATGAGCCCC.......................................................................211.000.00------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................AATGGTGAGGAACAGGGAA.........................................................................................1911.001.00------------------------------------------------------------1.00----------------------------------------
......................................................................................................................................................................................................TCTACGAAGATGGAGAGAAGCC.........................2211.001.00---------------------------------------------------------------------------------------------------1.00-
......................................................................................................................................................AGGGAAGAGGCAGCTTAG.............................................................................181.000.00----------------------------1.00------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGATTA..............................................................................................2511.002.00-------------------------1.00---------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAAGT.............................................................................................2611.001.00-----------------------------------1.00-----------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCCGTT................................................231.000.00----------------------------------------1.00------------------------------------------------------------
...............................................................................................................................................................................................................ATGGAGAGAAGCCACCAGTC..................2011.001.00---------------------------------------------------------------------------------------------1.00-------
................................................................................................................................TGGGGGAGCAATGGTGAGGAACAG.............................................................................................2411.001.00------------------1.00----------------------------------------------------------------------------------
........................GGAACTTACTTGCTCAGACCTGC......................................................................................................................................................................................................2311.001.00----------------------------------1.00------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAA................................................................................................2311.001.00-------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................CTGTCCTTTCTGTCCCCTCCAGGAATCTA...........................................2911.001.00-----------------------1.00-----------------------------------------------------------------------------
...........................................................................................................................................TGGTGAGGAACAGGGAAGAGA.....................................................................................2111.001.00-----------------------------------------------------1.00-----------------------------------------------
................................................AGGTAATCCTGTCTAGGAAACAG..............................................................................................................................................................................2311.001.00-----------------------1.00-----------------------------------------------------------------------------
...............TACCCGCCTGGAACTTACTTGCTCAGACC.........................................................................................................................................................................................................2911.001.00----------------------------------------------------------------------------------------------1.00------
................................................................................................................................................................................TCCTTTCTGTCCCCTCCAGAA................................................211.000.00---------------1.00-------------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCC...................................................201.000.00--------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................TGAGGAACAGGGAAGAGGCAGCTATGA............................................................................2711.001.00------------------------------------------------------------------------------------------1.00----------
.................................TTGCTCAGACCTGCAAGGAATC..............................................................................................................................................................................................221.000.00-------------------------------------------------------------------------1.00---------------------------
...............................................................................................................................................GAGGAACAGGGAAGAGGACA..................................................................................201.000.00-------1.00---------------------------------------------------------------------------------------------
............................................................................................................................ACTCTGGGGGAGCAATGGTGAG...................................................................................................2211.001.00---------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................AGCTATGAGGCCCTGTCTCTC...............................................................211.000.00-------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................GAGGAACAGGGAAGAGCC....................................................................................181.000.00-------------------------------------------------------------------------------------------1.00---------
................................................................................................................................TGGGGGAGCAATGGTGAGGAACAGGGA..........................................................................................2711.001.00---------------------------------------------------------1.00-------------------------------------------
................................................................................................................................................................................TCCTTTCTGTCCCCTCCAGTCT...............................................221.000.00-1.00---------------------------------------------------------------------------------------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCATT....................................................211.000.00-1.00---------------------------------------------------------------------------------------------------
..........................................................................................................................................ATGGTGAGGAACAGGGAAGAGGCAAT.................................................................................261.000.00-----------------------------------------------------------------------------------------1.00-----------
..............................................................................................................................................TGAGGAACAGGGAAGAG......................................................................................1750.200.20--0.20--------------------------------------------------------------------------------------------------

Antisense strand
TGGCCCCCCAGCTCCTACCCGCCTGGAACTTACTTGCTCAGACCTGCAAGGTAATCCTGTCTAGGAAACAGCTGGGGTGGGCCCCAGGACAGGTGTCCCTTTTTATCCCAGGGACACGGATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAGGAATCTACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCC
...............................................................................................................................(((((((..((.....((((.((((((......((....))...))))))))))..))..))).))))..................................................
.........................................................................................................................122......................................................................195................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
mjTestesWT1()
Testes Data. (testes)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT4()
Testes Data. (testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR553582(SRX182788)
source: Brain. (Brain)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR206942(GSM723283)
other. (brain)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR206939(GSM723280)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR206940(GSM723281)
other. (brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR206941(GSM723282)
other. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
.......CCAGCTCCTACCCGCCGC............................................................................................................................................................................................................................ 181.000.00----------------------------------------------------------1.00------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCAAA.................................................... 191.000.00----------1.00------------------------------------------------------------------------------------------
.......CCAGCTCCTACCCGCCTTA........................................................................................................................................................................................................................... 191.000.00----------------------------1.00------------------------------------------------------------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCACA.................................................... 211.000.00------------------------------------------------1.00----------------------------------------------------
.......................TGGAACTTACTTGCTCACGGA......................................................................................................................................................................................................... 211.000.00--------------------------------------------------------------------------------------1.00--------------