ID: uc008gev.4
GENE: Ehbp1l1(14)
chr19:5710648-5710842-


(1)
AGO.mut 		(1)
AGO1.ip 		(4)
AGO2.ip 		(1)
AGO3.ip 		(8)
B-CELL 		(15)
BRAIN 		(4)
CELL-LINE 		(2)
DCR.mut 		(1)
DGCR8.mut 		(11)
EMBRYO 		(4)
ESC 		(5)
FIBROBLAST 		(6)
HEART 		(2)
KIDNEY 		(12)
LIVER 		(2)
LUNG 		(4)
LYMPH 		(23)
OTHER 		(4)
OTHER.mut 		(2)
OVARY 		(2)
PIWI.ip 		(1)
PIWI.mut 		(4)
SKIN 		(8)
SPLEEN 		(15)
TESTES 		(1)
THYMUS 		(6)
TOTAL-RNA 		(1)
UTERUS

Sense strand
CCCCTCCTACTGAGGAGTCATCACCCAGCCTGGGGGAAGAGACAGGCCTGGTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCTAGCAACGGTTCCAGGACACAAGTCAGTACGTGTGCGCAGAGCTGCAAGCCCT
......................................................((..((..(((.((((((((..(((............(((((.(((...))).))))))))....)))))))))))..))..)).........................................................
..................................................51............................................................................................145................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR073954(GSM629280)
total RNA. (blood)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		mjTestesWT1()
Testes Data. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT4()
Testes Data. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR553584(SRX182790)
source: Heart. (Heart)		mjLiverWT3()
Liver Data. (liver)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR060845(GSM561991)
total RNA. (brain)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT2()
Testes Data. (testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR206942(GSM723283)
other. (brain)		SRR042476(GSM539868)
mouse heart tissue [09-002]. (heart)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
..................................................GTAAGGAGAGTTAGGTGGGCAGA..........................................................................................................................231242.00242.0032.0022.009.0015.004.007.00-7.005.00--9.002.008.0013.005.004.001.005.003.009.002.003.005.003.001.002.003.001.003.003.00-1.001.00--1.002.00-2.003.002.002.003.002.001.001.00-----3.00-1.00--1.001.00-1.002.001.00-2.00--1.001.00---1.00-1.001.002.002.00---1.00---1.00---1.00-----------1.001.00-------1.001.001.00--1.001.00--1.001.00-1.00------1.00---
..................................................GTAAGGAGAGTTAGGTGGGCAG...........................................................................................................................221108.00108.0028.003.002.002.006.003.0015.002.002.00---1.001.00-1.002.003.001.002.00-1.001.00-1.001.002.001.002.001.001.00---------1.00------2.001.00-1.00---1.00----2.00--1.00--1.00----1.00--2.001.001.00--1.00-1.00------1.00-------1.00--------1.00--1.00-----1.00---------1.00---------
..................................................GTAAGGAGAGTTAGGTGGGCAGAA.........................................................................................................................24132.00242.003.00-1.001.003.002.00---------1.001.004.001.00--1.00--2.00--1.00--1.002.00----1.00--1.00---------1.001.00---------------------1.00------------------------1.00--------1.00--------------------1.00-----
...................................................TAAGGAGAGTTAGGTGGGCAGA..........................................................................................................................22124.0024.001.005.001.00----3.00---1.001.00--1.00------1.00--------3.00-1.002.00-2.00------------1.00-------------1.00---------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGT..........................................................................................................................23124.00108.005.003.00-1.001.00------------1.00-----1.00-1.00--------------------2.00----------1.00-------1.001.00--1.00-1.00-----------1.00---------------------1.00--------1.00--1.00---------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAT.........................................................................................................................24118.00242.001.002.00-3.001.003.00--1.00---2.00---------1.00------------------------------1.00----1.00----------------------------------1.00--1.00------------------------------------
..................................................GTAAGGAGAGTTAGGTGG...............................................................................................................................18116.0016.001.00-1.00-1.00---2.00-5.00----1.00---------------------1.00-------1.00-------------------------1.00----------------------------1.00---------------------------1.00----
..................................................GTAAGGAGAGTTAGGTGGGCA............................................................................................................................21114.0014.006.00-1.001.001.001.00------1.00---1.00---------------------------------------------------1.00-------------1.00--------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGT........................................................................................................................25113.0013.00-----1.00----9.00-1.00----------------------1.00-------------------------------------------------------1.00-----------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAA........................................................................................................................25113.00242.002.00-3.00--------1.001.00------2.00-----1.00---1.00-------1.00---1.00-------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGG..............................................................................................................................19112.0012.002.00-1.00-----1.00----1.00----1.00-------------------4.00--------------1.00------------------------------------------------------------------------1.00------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAT........................................................................................................................25112.00242.001.001.001.00--2.00-1.00---1.00----1.00-1.00------1.00------1.00---------------------------1.00------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATT........................................................................................................................2519.00242.004.00----1.00-----------1.00----------2.00------------1.00-------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAT...........................................................................................................................2217.0014.002.00-------------------------------1.00--------------1.001.00-1.00---------------1.00------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAA...........................................................................................................................2216.0014.001.00-------------------------------1.00-2.00----1.00------------------------------1.00--------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAG...........................................................................................................................2115.005.001.00---3.00--1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTAA........................................................................................................................2514.00108.00-------------------3.00------1.00----------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCC..................................................................7913.003.00---------3.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTT.......................................................................................................................2613.003.00---------------------------------1.00-2.00-------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTT......................................................9013.003.00---------3.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGG..........................................................................................................................2312.00108.00---------------1.00-----------------------------------------------1.00---------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAATAA......................................................................................................................2712.00242.00---------------------2.00---------------------------------------------------------------------------------------------------------------
.......................................................GAGAGTTAGGTGGGCAGA..........................................................................................................................1812.002.00--2.00----------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTT.........................................................................................................................2412.00108.001.00-----------------------------------------------1.00------------------------------------------------------------------------------------
......................................................GGAGAGTTAGGTGGGCAGA..........................................................................................................................1912.002.00-------------1.00----------------------------------------------------------------------------1.00------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGAAT............................................................................................................................2112.0016.00-1.00----------------1.00------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATA........................................................................................................................2512.00242.001.00-------------------------------------------------------------------------------------1.00----------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAG.........................................................................................................................2412.002.001.00----------------------------------1.00-------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTA.........................................................................................................................2412.00108.00-1.00----------------------------1.00------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAT..........................................................................................................................2312.0014.00------------1.00---------------------------------------------------------------------------------1.00--------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCT.................................................................8012.002.00---------2.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAC........................................................................................................................2512.00242.00--1.00---------1.00------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAT.........................................................................................................................2312.0024.00-1.00-1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCTTCTAGT.................................................2412.001.00--1.00-------------------------------------------------------------------------------------------------------------------1.00--------------
..................................................GTAAGGAGAGTTAGGTGGTCAG...........................................................................................................................2212.0016.00---1.00----1.00----------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAAT........................................................................................................................2412.0024.00--1.00----------------------1.00-----------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAAA.......................................................................................................................2612.00242.00--1.00-1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCATA..........................................................................................................................2312.0014.002.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCATTTT........................................................................................................................2511.0014.001.00------------------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTT.....................................................9111.003.00---------1.00---------------------------------------------------------------------------------------------------------------------------
......................ACCCAGCCTGGGGGAGTC...........................................................................................................................................................181.000.00---------------------------------------------------1.00---------------------------------------------------------------------------------
................................................................GTGGGCAGAGTTGGTGTGGTACTTTCTGAGCT...................................................................................................3211.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------
...................ATCACCCAGCCTGGGGGAAGAGAC........................................................................................................................................................2411.001.00--------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAAAA........................................................................................................................2511.0014.00------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCCGG..........................................................................................................................2311.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGAA.............................................................................................................................2011.0016.00----------------------1.00--------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGA........................................................................................................................2511.002.00--------1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................ACTTTCTGAGCTGGCCTGGGGTG........................................................................................2311.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------
.......................................................GAGAGTTAGGTGGGCAGAG.........................................................................................................................1911.001.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCT....................................................9311.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGTAT........................................................................................................................2411.005.00---------------------------------------------------------------------1.00---------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGATAT.......................................................................................................................2511.0024.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTAAA.......................................................................................................................2611.00108.00----1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTT............................................................8511.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCATTTA........................................................................................................................241.000.00-----------------------1.00-------------------------------------------------------------------------------------------------------------
.....CCTACTGAGGAGTCATCACCCAGCCTGGGG................................................................................................................................................................3011.001.00---------------------------------------------------------------------------------------------------1.00---------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGTA.........................................................................................................................2311.005.00--------------------------1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCCAGGACACAAGTCAGTACGTGTGCGC...............2811.001.00--------------------------------------------------------------------------------------------------1.00----------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCCGA..........................................................................................................................2311.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGCAGT...........................................................................................................................2211.0016.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGACT........................................................................................................................2511.00242.00---1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................GTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTC.........................................................................4911.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAA...........................................................................................................................211.000.00----------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAAA.........................................................................................................................2411.0014.00-------------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGAAAT..........................................................................................................................2311.0012.00----1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAGT.......................................................................................................................2611.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATAAT......................................................................................................................2711.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATTT.......................................................................................................................2611.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAAT.......................................................................................................................2611.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGTGCA............................................................................................................................211.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................AGGAGAGTTAGGTGGGCAGAAT........................................................................................................................221.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-------
..................................................GTAAGGAGAGTTAGGTGGGC.............................................................................................................................2011.001.00---------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCCG...........................................................................................................................2211.001.00------1.00------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCTAG..................................................8011.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GTCAGTACGTGTGCGCAGAGCTGC.......2411.001.00--------------------------------------------------------1.00----------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAC.........................................................................................................................2411.00242.00--------1.00----------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAAGA.........................................................................................................................231.000.00-------------------------1.00-----------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGTTT........................................................................................................................2411.005.001.00------------------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGT..........................................................................................................................2211.005.00--1.00----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................GCGCAGAGCTGCAAGCTG.181.000.00---------------------------------------------------1.00---------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCC..........................................................8711.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGTAGA..........................................................................................................................2311.0012.00----------------------------------------------------------------------------------------------------------------------------1.00--------
.................................................................................................................................................................CAAGTCAGTACGTGTGCGCAG.............2111.001.00--------------------------------------------------------------------------------------------1.00----------------------------------------
..........................................................................TTGGTGTGGTACTTTCTGAGCTGGCC...............................................................................................2611.001.00-------------------------------------------------------------------------------------------------------1.00-----------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAAA........................................................................................................................2411.0024.00-------------1.00-----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................ACAAGTCAGTACGTGTGCGCAGAGCT.........2611.001.00---------------------------------1.00---------------------------------------------------------------------------------------------------
......................................................GGAGAGTTAGGTGGGCAGAGTTGGTGT..................................................................................................................2711.001.00---------------------------1.00---------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAG........................................................................................................................2511.00242.00------------------------------------------------------------------------------------1.00------------------------------------------------
.................TCATCACCCAGCCTGGGGGAAGAGAC........................................................................................................................................................2611.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGATT........................................................................................................................2411.0024.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAAGA......................................................................................................................2711.00242.00-----------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCATT..........................................................................................................................2311.0014.00--------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGA.............................................................................................................................2011.0012.00-------------------------------------------------------------------------------------------------------------1.00-----------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCTTCTACA.................................................241.000.00------------1.00------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CAGTACGTGTGCGCAGAGCTGCAAGCCCT2911.001.00--------------------------------------------------------1.00----------------------------------------------------------------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCTTCTAG..................................................2311.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAAT.........................................................................................................................2411.0014.00---------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAATT.........................................................................................................................2411.0014.00-----1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAAA..........................................................................................................................221.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTT................................................................8111.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
................................GGGGAAGAGACAGGCCTG.................................................................................................................................................1820.500.50--------------------------------0.50----------------------------------------------------------------------------------------------------
.........................................................GAGTTAGGTGGGCAGAGT........................................................................................................................1820.500.50----------------------------------------------------------------------------------------------------------------------------------0.50--
....................................................................................ACTTTCTGAGCTGGCCTGGGG..........................................................................................2120.500.50-----------------------------------------------------------------------------------------------------------------------------------0.50-

Antisense strand
CCCCTCCTACTGAGGAGTCATCACCCAGCCTGGGGGAAGAGACAGGCCTGGTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCTAGCAACGGTTCCAGGACACAAGTCAGTACGTGTGCGCAGAGCTGCAAGCCCT
......................................................((..((..(((.((((((((..(((............(((((.(((...))).))))))))....)))))))))))..))..)).........................................................
..................................................51............................................................................................145................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR073954(GSM629280)
total RNA. (blood)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		mjTestesWT1()
Testes Data. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT4()
Testes Data. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR553584(SRX182790)
source: Heart. (Heart)		mjLiverWT3()
Liver Data. (liver)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR060845(GSM561991)
total RNA. (brain)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT2()
Testes Data. (testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR206942(GSM723283)
other. (brain)		SRR042476(GSM539868)
mouse heart tissue [09-002]. (heart)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
.....................................................................................................................TCCTCTGCCTCCTTCA.............................................................. 162.000.00----------1.00-----------------------------------------------------------------------------1.00--------------------------------------------
.........................................................................GTTGGTGTGGTACTTCA......................................................................................................... 171.000.00----------------------------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................GTCCTCTGCCTCCTTCGA............................................................. 181.000.00-------------------------------------------------------------------------------1.00-----------------------------------------------------
.................................................................................................................................TTCCTTCCCCTTCTACTG................................................ 181.000.00------------------------------------------------------------------------------------------------------------1.00------------------------
............................................................................................................................CCTCCTTCCTTCCCCTGGCA................................................... 201.000.00------------------------------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................CCTCTGCCTCCTTCCTTCAG......................................................... 201.000.00------------------------1.00------------------------------------------------------------------------------------------------------------
.................................................................TGGGCAGAGTTGGTGTA................................................................................................................. 171.000.00-------------------------------------------------------------------------------------------------------------------------1.00-----------
........................................................................................................................TCTGCCTCCTTCCTTTGTA........................................................ 191.000.00-------------------------------------------------------1.00-----------------------------------------------------------------------------
.................................................................................................................................TTCCTTCCCCTTCTAATG................................................ 181.000.00---------------------------------------------------1.00---------------------------------------------------------------------------------
.........................................................................GTTGGTGTGGTACTTCCA........................................................................................................ 181.000.00-------------------------------------------------------------------1.00-----------------------------------------------------------------
..............................................................................................................TCACCTGTCCTCTGCCCCGA................................................................. 201.000.00-------------------------------------------------------1.00-----------------------------------------------------------------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCT....................................................... 18100.100.10------------------------------------------------------------------------------------------------------------------------------------0.10