ID: uc008fzu.10
GENE: Adrbk1(11)
chr19:4290476-4290653-


(1)
AGO.mut 		(9)
AGO2.ip 		(2)
AGO3.ip 		(12)
B-CELL 		(15)
BRAIN 		(4)
CELL-LINE 		(1)
DCR.mut 		(2)
DGCR8.mut 		(11)
EMBRYO 		(5)
ESC 		(3)
FIBROBLAST 		(1)
KIDNEY 		(5)
LIVER 		(1)
LUNG 		(3)
LYMPH 		(13)
OTHER 		(5)
OTHER.mut 		(1)
PIWI.ip 		(3)
SKIN 		(8)
SPLEEN 		(12)
TESTES 		(2)
THYMUS 		(1)
TOTAL-RNA

Sense strand
TGCATTCCACACACCAGACAAGCTCAGCTTCATCCTGGACCTCATGAACGGTGAGCTCGGCCCTAGGGGGTGGACCTAGGGCTGGACCTGGGCAGGAAGCTGAGTCTTACCTGGGGGCTACCCCTCAGGTGGGGACCTGCACTACCACCTGTCTCAGCATGGAGTCTTCTCTGAAGCC
..........................................................................((((((......))))))(((....)))........(((((((....)))))))..................................................
.......................................................................72......................................................128................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT1()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		mjTestesWT4()
Testes Data. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		mjTestesWT2()
Testes Data. (testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM475281(GSM475281)
total RNA. (testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346415(SRX098256)
source: Testis. (Testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
............................................................................TAGGGCTGGACCTGGGCAGGA.................................................................................21119.0019.00----6.00-3.001.00-3.00-------------1.00------1.00-------2.00--------------------------1.00---1.00-----------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGA............................................................................................23110.0010.00-2.00-1.00----4.00-------------------1.00---1.00----1.00-------------------------------------------------------------
..................................CTGGACCTCATGAACG................................................................................................................................1619.009.008.00-----------------------------------------------------------------------1.00--------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAGT.................................................2416.002.00-----------1.00--------3.00------------------1.00----1.00------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAAA..............................................................................2416.001.00--6.00------------------------------------------------------------------------------------------------
............................................................................................................................................................GCATGGAGTCTTCTCTGAAGC.2115.005.00-----5.00---------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGA.............................................................................................2214.004.00---------------1.00-----1.00--------------1.00----------------------------------------1.00---------------------
...............................................................TAGGGGGTGGACCTAGGGCTG..............................................................................................2114.004.00----------1.00---1.00-1.00------------------------------------------------------1.00---------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAT...............................................................................2314.001.00-----------1.001.00---------------------------1.00-------------------1.00--------------------------------------
...................................TGGACCTCATGAACGGTG.............................................................................................................................1814.004.00----------1.00-----------3.00----------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCA...................................................2214.004.00------3.00----------1.00---------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAA...........................................................................................2414.0010.00----------------------------------------------------------1.00-----------------1.00---------1.00--1.00---------
...............................................................TAGGGGGTGGACCTAGGGCT...............................................................................................2014.004.00-------------------------------------------1.00---1.00--1.00----------1.00-------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAC...........................................................................................2413.003.00----------------3.00----------------------------------------------------------------------------------
.................................CCTGGACCTCATGAACG................................................................................................................................1713.003.00---------------------------------2.00------------------------------------------------------1.00----------
..................................................................................TGGACCTGGGCAGGAAGCTGAG..........................................................................2213.003.00--------------------------------1.00-1.00-------------------1.00--------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAAT..........................................................................................2513.0010.00--1.00--------1.00------------------------------------------------------------------------1.00--------------
...............................................................TAGGGGGTGGACCTAGGGCTGT.............................................................................................2213.004.00-------------1.00-1.00--1.00--------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGG.............................................................................................2213.003.00-------1.00---1.00------------------1.00--------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGACT..........................................................................................2512.003.00-1.00--------------------------------------1.00----------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAG...................................................................................1912.002.00---1.00--------------1.00--------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAAA..........................................................................................2512.0010.00------------1.00------------1.00-------------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAG..................................................2212.002.00-----------------------------1.00--------------------------------------------------1.00------------------
...............................................................TAGGGGGTGGACCTAGGGC................................................................................................1912.002.00-1.00------------1.00------------------------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGT.................................................2312.002.00-------------------2.00-------------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAGA.................................................2412.002.00-----------------------------1.00------------------------------------------------------------1.00--------
................................................................AGGGGGTGGACCTAGGGCTGGAAT..........................................................................................2412.001.00------------------------------------------1.00---------------------1.00----------------------------------
............................................................................TAGGGCTGGACCTGGGCAGG..................................................................................2012.002.00---1.00-1.00---------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGAAAA..........................................................................................2512.004.00------------------------2.00--------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAG..................................................2312.002.00---------------1.00------------------------------------------------------1.00----------------------------
.............................................................CCTAGGGGGTGGACCTAGGGCTGGACCTGGGCAGGAAGCTGAGTCTTACCTGGGGGCTACCCCTCAGTTT...............................................702.000.00-----------------------------------------2.00---------------------------------------------------------
.............................TCATCCTGGACCTCATGAACGGTGGGAA.........................................................................................................................281.000.00---------------------------------------------------------------------------------1.00-----------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCT...................................................221.000.00-----------------------------------------------------------------------------------1.00---------------
....................................................................GGTGGACCTAGGGCTAAC............................................................................................181.000.00--------------------------------------------------------------------------------------------1.00------
...............................................................TAGGGGGTGGACCTAGGGCTGGC............................................................................................2311.003.00--------1.00------------------------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGG.............................................................................................2111.001.00-------------1.00-------------------------------------------------------------------------------------
...........................................................................CTAGGGCTGGACCTGGGCAGGA.................................................................................2211.001.00-----------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................ACCTGTCTCAGCATGGAGT.............1911.001.00-----------------------1.00---------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGTT............................................................................................2311.004.00------------------------------------------1.00--------------------------------------------------------
.................................................................GGGGGTGGACCTAGGGCTGGAAT..........................................................................................231.000.00---------------------------------------------------------------------------------------1.00-----------
...............................................................TAGGGGGTGGACCTAGGGCTGTAT...........................................................................................2411.004.00-------1.00-------------------------------------------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGCAT...............................................................................2311.002.00-------------------------------------------------------------------------1.00-------------------------
...................AAGCTCAGCTTCATCCTGGACCT........................................................................................................................................2311.001.00---------------------------------------------------1.00-----------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAA................................................................................2211.001.00----------------------------1.00----------------------------------------------------------------------
..........ACACCAGACAAGCTCAGCTATTT.................................................................................................................................................231.000.00--------------------------1.00------------------------------------------------------------------------
....TTCCACACACCAGACAAGCTCAGCTTC...................................................................................................................................................2711.001.00--------------------------------------------------------1.00------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGTC...........................................................................................2411.003.00----------------------------------------------------------------------------------1.00----------------
............................................................................TAGGGCTGGACCTGGGCAGGATAA..............................................................................2411.0019.00-----------1.00---------------------------------------------------------------------------------------
.....................................................................................ACCTGGGCAGGAAGCTGAGTCT.......................................................................2211.001.00---------------------1.00-----------------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGTA................................................2411.002.00---------------1.00-----------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGACTTT........................................................................................2711.003.00------------------------1.00--------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAT...........................................................................................2411.0010.00---------------------1.00-----------------------------------------------------------------------------
....................AGCTCAGCTTCATCCTGGA...........................................................................................................................................1911.001.00----------1.00----------------------------------------------------------------------------------------
.................................................................................................................GGGGCTACCCCTCAGCTGG..............................................191.000.00---------------------------------------------------------------1.00-----------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTAAA............................................................................................2311.004.00-------------1.00-------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGG............................................................................................2311.003.00--------------------------------------------------------------------------1.00------------------------
.GCATTCCACACACCAGACAAGCTC.........................................................................................................................................................2411.001.00-------------------------------1.00-------------------------------------------------------------------
.................ACAAGCTCAGCTTCATCCTGGACCTCATGAACG................................................................................................................................3311.001.00-1.00-------------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTTA.............................................................................................2211.004.00-------1.00-------------------------------------------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAAAAA............................................................................2611.001.00--------------1.00------------------------------------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAATT..............................................................................2411.001.00-------------------1.00-------------------------------------------------------------------------------
....................................................................................GACCTGGGCAGGAAGCTTAG..........................................................................201.000.00----------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................TACCACCTGTCTCAGCATGGAGTCT...........2511.001.00---------------------------------------1.00-----------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAA...............................................................................2311.001.00---------1.00-----------------------------------------------------------------------------------------
.....TCCACACACCAGACAAGCTCAGCTTA...................................................................................................................................................261.000.00------------1.00--------------------------------------------------------------------------------------
.................................................................................CTGGACCTGGGCAGGAAG...............................................................................1811.001.00-------------------------------1.00-------------------------------------------------------------------
................................TCCTGGACCTCATGAACG................................................................................................................................1811.001.00-----------------1.00---------------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAA..................................................2311.004.00-----------------1.00---------------------------------------------------------------------------------
......................................................................................CCTGGGCAGGAAGCTGAGTCTTA.....................................................................2311.001.00-----------------------------------1.00---------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGTT................................................2411.002.00----------------------------------------------1.00----------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGTCG...............................................................................2311.002.00---1.00-----------------------------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGGAC...........................................................................................2311.001.00-------1.00-------------------------------------------------------------------------------------------
....................................GGACCTCATGAACGGTGGG...........................................................................................................................191.000.00------------------1.00--------------------------------------------------------------------------------
..........................GCTTCATCCTGGACCTCATGAACGG...............................................................................................................................2511.001.00--------------------------1.00------------------------------------------------------------------------
.................ACAAGCTCAGCTTCATCCTGGACCTC.......................................................................................................................................2611.001.00--------------------------------------------------------------1.00------------------------------------
.........................................................................................GGGCAGGAAGCTGAGTCG.......................................................................181.000.00---------------------------------------------1.00-----------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGGACT..........................................................................................2411.001.00------------------------------------1.00--------------------------------------------------------------
.................ACAAGCTCAGCTTCATCCT..............................................................................................................................................1911.001.00------------1.00--------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTAAAT...........................................................................................2411.004.00-----------------------------------1.00---------------------------------------------------------------
.............................TCATCCTGGACCTCATGAAC.................................................................................................................................2011.001.00----------------------------------1.00----------------------------------------------------------------
.................................CCTGGACCTCATGAACGGT..............................................................................................................................1911.001.00------------------------------------------------1.00--------------------------------------------------
.............CCAGACAAGCTCAGCTTCATCCTGGAA..........................................................................................................................................271.000.00-------------------------------------------------------------------------------1.00-------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGATAA.........................................................................................2611.0010.00-1.00-------------------------------------------------------------------------------------------------
...............................ATCCTGGACCTCATGAACGGTG.............................................................................................................................2211.001.00----------1.00----------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGT............................................................................................2311.003.00-------1.00-------------------------------------------------------------------------------------------
...................................TGGACCTCATGAACGGTGGGG..........................................................................................................................2111.004.00--------------------------------------------------------------------1.00------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAT................................................................................2211.0019.00-------------------------------------------------------1.00-------------------------------------------
...........................................................................CTAGGGCTGGACCTGGGCAGGAAA...............................................................................241.000.00---------------------------------------------------------1.00-----------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGACTAG........................................................................................2711.003.00-1.00-------------------------------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAAT.................................................2411.004.00-------------------------------------------------------------------------------------1.00-------------
...............................................................TAGGGGGTGGACCTAGGGCTGTAA...........................................................................................2411.004.00-------------------------1.00-------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGATT..............................................................................................211.000.00--------------1.00------------------------------------------------------------------------------------
...........................................................................................GCAGGAAGCTGAGTCTAG.....................................................................181.000.00-----------------------------------------------------1.00---------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAGAA.............................................................................251.000.00---1.00-----------------------------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCCA..................................................231.000.00-----------------1.00---------------------------------------------------------------------------------
....................................GGACCTCATGAACGGTGG............................................................................................................................181.000.00---------------------------------------------------------------------------1.00-----------------------
................................................................AGGGGGTGGACCTAGGGCTGGACA..........................................................................................2411.001.00-----------------------------------------------------------1.00---------------------------------------
...............................ATCCTGGACCTCATGAACGG...............................................................................................................................2011.001.00---------------------------1.00-----------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGGA............................................................................................2211.001.00-------------------------------------1.00-------------------------------------------------------------
..................................................GTGAGCTCGGCCCTAGGGG.............................................................................................................1911.001.00-1.00-------------------------------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCT...............................................................................................1911.001.00---------------------------1.00-----------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCA...................................................2111.001.00-------------------------------------------------------------------1.00-------------------------------
...........................................................................CTAGGGCTGGACCTGGGCAG...................................................................................2011.001.00---------1.00-----------------------------------------------------------------------------------------
..................................................................................TGGACCTGGGCAGGAAGCTGAGC.........................................................................2311.003.00-------------1.00-------------------------------------------------------------------------------------
..................................CTGGACCTCATGAACGGTGAGCTCGGC.....................................................................................................................2711.001.00------------1.00--------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAAGT.........................................................................................2611.0010.00------------------------------------------------------------------------------1.00--------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAGTATT..............................................2711.002.00---1.00-----------------------------------------------------------------------------------------------
...............................ATCCTGGACCTCATGAACGGTGG............................................................................................................................2311.001.00-------------------------------------------------------------------------------------------1.00-------
.........................AGCTTCATCCTGGACCTCATGAACGGT..............................................................................................................................2711.001.00----------------------------------------------------1.00----------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTAG...................................................221.000.00---1.00-----------------------------------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGA.................................................2311.002.00-------------------------------------------1.00-------------------------------------------------------
..................................................................................TGGACCTGGGCAGGAAG...............................................................................1730.670.67--------------------------------------------0.33---------------------------------------------------0.33--
......................................................................................CCTGGGCAGGAAGCTGAGTC........................................................................2020.500.50-----------------------------------------------------------------------------------------------0.50---
..................................................................GGGGTGGACCTAGGGC................................................................................................1620.500.50--------------------------------------------0.50------------------------------------------------------
................................................CGGTGAGCTCGGCC....................................................................................................................1420.500.50---------------------------------------------0.50-----------------------------------------------------
..................................................................GGGGTGGACCTAGGG.................................................................................................1560.170.17--------------------------------------------------------------------------------------------------0.17

Antisense strand
TGCATTCCACACACCAGACAAGCTCAGCTTCATCCTGGACCTCATGAACGGTGAGCTCGGCCCTAGGGGGTGGACCTAGGGCTGGACCTGGGCAGGAAGCTGAGTCTTACCTGGGGGCTACCCCTCAGGTGGGGACCTGCACTACCACCTGTCTCAGCATGGAGTCTTCTCTGAAGCC
..........................................................................((((((......))))))(((....)))........(((((((....)))))))..................................................
.......................................................................72......................................................128................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT1()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		mjTestesWT4()
Testes Data. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		mjTestesWT2()
Testes Data. (testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM475281(GSM475281)
total RNA. (testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346415(SRX098256)
source: Testis. (Testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
.....................GCTCAGCTTCATCCTCAA........................................................................................................................................... 181.000.00-------------------------------------------------1.00-------------------------------------------------
.........................AGCTTCATCCTGGACT......................................................................................................................................... 160.400.00---------------------------------------------------------------------------------------------0.40-----
.........................AGCTTCATCCTGGACAAG....................................................................................................................................... 180.200.00----------------------------------------------------------------------------------------------0.20----
.........................AGCTTCATCCTGGACAC........................................................................................................................................ 170.200.00----------------------------------------------------------------------------------------------0.20----
.........................AGCTTCATCCTGGAC.......................................................................................................................................... 1550.200.20---------------------------------------------------------------------------------------------0.20-----
.........................AGCTTCATCCTGGACTGGG...................................................................................................................................... 190.200.00-------------------------------------------------------------------------------------------------0.20-
.........................AGCTTCATCCTGGACAAA....................................................................................................................................... 180.200.00----------------------------------------------------------------------------------------------0.20----