ID: uc008cua.4
GENE: Ppp2r5d(10)
chr17:46822329-46822517-


(3)
AGO1.ip 		(11)
AGO2.ip 		(10)
B-CELL 		(26)
BRAIN 		(1)
CELL-LINE 		(1)
DGCR8.mut 		(9)
EMBRYO 		(7)
ESC 		(5)
FIBROBLAST 		(2)
HEART 		(1)
KIDNEY 		(5)
LIVER 		(2)
LUNG 		(5)
LYMPH 		(23)
OTHER 		(8)
OTHER.mut 		(1)
OVARY 		(2)
PANCREAS 		(5)
PIWI.ip 		(3)
PIWI.mut 		(2)
SKIN 		(8)
SPLEEN 		(31)
TESTES 		(2)
THYMUS 		(1)
TOTAL-RNA 		(2)
UTERUS

Sense strand
AGCCGCTCTTCCGCCAGCTTGCCAAATGTGTTTCCAGCCCCCATTTCCAGGTAAGAGCAGACTCACTGGTTCCTAGGTTTGGTAGAGCAGGTGTTGAGAATTGCAGTGAGTGCCCACTCAACTCCACTCTCCTCGCCAGGTGGCGGAGCGCGCCCTCTACTACTGGAACAATGAGTACATCATGAGCCT
...........................................................................(((..((.((((..((.((((((....(((.....)))...)))))).)).))))))..)))....................................................
....................................................................69....................................................................139................................................
SizePerfect hitTotal NormPerfect NormSRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjTestesWT4()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjTestesWT1()
Testes Data. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjTestesWT2()
Testes Data. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR206942(GSM723283)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR206941(GSM723282)
other. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR073955(GSM629281)
total RNA. (blood)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGA............................................................................................241114.00114.006.007.006.003.003.002.00-7.0012.005.001.004.009.002.00-1.001.00-3.002.001.00-1.001.00--2.003.001.001.00--1.00--1.002.00-1.00--2.00-1.002.00-1.00----1.00--1.00--1.001.00--------1.001.00-2.00--1.00-1.00-1.00-----1.00-1.00----1.00----------------1.00-----1.00---1.00-----------------1.00-----1.00---
..........................................................................AGGTTTGGTAGAGCAGGTGTTGA............................................................................................231107.00107.0014.001.003.003.00-4.00-1.00-3.001.004.00-1.003.003.002.00-2.001.003.00-2.002.00-4.002.00-1.00--1.002.003.00--1.00-1.002.001.00-2.00-1.00-1.001.001.00-1.00--2.00-2.00-----1.001.00----------1.001.00-1.001.001.002.00--2.001.001.00---2.00---1.00--1.00------1.00-1.001.00----------1.00--------1.001.001.00--------------1.00--
.........................................................................TAGGTTTGGTAGAGCAGGTGTTG.............................................................................................23156.0056.005.004.00-5.002.001.00---1.00---4.00--2.007.00-1.001.002.002.001.00---1.00-------1.001.00---1.00-2.00--1.001.00-----1.00------2.00------1.00---------1.00-------1.00--------1.00--1.00---------------------1.00--1.00-----------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAG...........................................................................................24115.0015.001.00------4.00---------------1.00---1.00---1.00------1.00--1.00-------------------1.00-----1.00------------------1.00-------------------------------------------1.00-----1.00--------
..........................................................................AGGTTTGGTAGAGCAGGTGTTG.............................................................................................22115.0015.002.00------------1.001.001.00--1.001.00--------1.00----------1.00---------------1.00--1.00---------------------1.00----------1.00-----------1.00----1.00------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGT............................................................................................24113.0056.004.001.00-------1.001.00----1.00-------------------------------------------1.00--1.00---1.00-------------1.00----------------------------1.00-----------------------------------
.......................................................................................................................AACTCCACTCTCCTCGCCAGT.................................................21110.001.00-----1.00-----------------------------------------2.00------2.00--------------1.00-----------1.00-------------------1.00----------1.00-------1.00------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTT..............................................................................................2219.009.002.00--------1.00-----1.00------------------------1.00-----------------1.00---------------1.00---------------1.00------1.00-----------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGAGC..2719.009.00--7.00-------------1.00------------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................ACTGGAACAATGAGTACATCAT......2218.008.00----3.00-----4.00------------------------------------------------------------------------------------------------------------------------------1.00-------
.........................................................................TAGGTTTGGTAGAGCAGGTGT...............................................................................................2118.008.00---1.00--------------1.001.00------------------------------1.00--------------------------------------2.00----------------1.00-------------------------------------1.00
......................................................................................................................CAACTCCACTCTCCTCGCCAGT.................................................227.000.00-----1.00-------1.00------------------1.00------1.00-----------------------------------------1.00--------------------------------1.00-------------------1.00----------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAGT..........................................................................................2516.0015.00-1.00--------------------------------------1.00-----------1.00----1.00--1.001.00-----------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTA..............................................................................................2216.008.00---------------------5.00-------------------------------------------------------------------------------------------------------------1.00-------------
........................................................................CTAGGTTTGGTAGAGCAGGTGTTG.............................................................................................2416.006.00---------------1.00--------------5.00------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGT............................................................................................2316.0015.001.00--------------1.00---1.001.00----1.00--------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAGA..........................................................................................2515.005.00------5.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTT..............................................................................................2115.005.00--------------1.00----------------------------1.00-----3.00-----------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTA.............................................................................................2314.009.00--------------2.00----------1.00--------------------------------------------------------------------------1.00--------------------------------------------
.....................................................................................AGCAGGTGTTGAGAATCAGG....................................................................................204.000.00-------------------------------------2.00------------------1.00----------------------------------------------------------------------------------1.00-----
.................................................................................................................................................................ACTGGAACAATGAGTACATC........2013.003.00----------2.00---------------1.00----------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAAA..........................................................................................2613.00114.00---------------------------------------------------1.00--------1.00--------------------------------------------------1.00---------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATT.......................................................................................2313.003.00----------------------------1.00-----1.00---------------------------------------------------------------1.00----------------------------------------------
........................................................................................AGGTGTTGAGAATTGCAGTGAG...............................................................................2213.003.00------1.00----1.00-----------------------------------------------------------------------------------------------------------1.00-------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAG...........................................................................................2513.003.00--------------------------------1.002.00---------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAT...........................................................................................2412.00107.00-----------------------------------1.00---------1.00---------------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAAT........................................................................................2212.002.00----1.00---------------------------------------------------------------------------------------------------------1.00----------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTGGA............................................................................................2312.001.00--------------------------------------------------------------1.00---------------1.00------------------------------------------------------------------
....................................................................................................................................................................GGAACAATGAGTACATCAT......1912.002.00----2.00--------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGAGCCT2912.002.00------------------------1.00-----------------------------------------------1.00------------------------------------------------------------------------
.....................................................................................AGCAGGTGTTGAGAATCAG.....................................................................................192.000.00--------------------------------------------------------2.00----------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTAA............................................................................................2312.005.00-----1.00---------------------------------------------------------1.00---------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAA...........................................................................................2412.00107.00----------------------------------1.00-------------------------------------------------------------------------------------------------1.00------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTTT............................................................................................2412.009.00---------1.00--------------------------------------------------------------------------------------------------------------------------------1.00------
......................................................................................................................CAACTCCACTCTCCTCGCCAGA.................................................222.000.00-----1.00------------------------------------------1.00------------------------------------------------------------------------------------------------
.................................................................................................................................................................ACTGGAACAATGAGTACAT.........1912.002.00----------1.00----------------------------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGAGCC.2812.002.00----------------2.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATTG......................................................................................2412.002.00----------------------------1.00-------------------------------1.00------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTG................................................................................................2012.002.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------1.00-
.........................................................................TAGGTTTGGTAGAGCAGGTTTTG.............................................................................................232.000.001.00-------------------------------------------------------------------1.00----------------------------------------------------------------------------
.......................................................................CCTAGGTTTGGTAGAGCAGGTGT...............................................................................................2312.002.00-------------------1.00---------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAA...........................................................................................2512.00114.00-------------------------------------------1.00-----------------------------------------1.00-----------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAA.........................................................................................2111.001.00--------------------------------------------------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................TGGCGGAGCGCGCCCTCT...............................1811.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................ACTGGAACAATGAGTACATCATGA....2411.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTCG.............................................................................................2311.008.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------
........................................................................................AGGTGTTGAGAATTGCACT..................................................................................191.000.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GGTGGCGGAGCGCGCTCCT................................191.000.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGAGCGCGCCCTCGAC.............................181.000.00---------------------------------------------------------------------1.00---------------------------------------------------------------------------
............................................................................GTTTGGTAGAGCAGGTGTTGAG...........................................................................................2211.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGG..................................................................................................1811.001.00---------------------------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................AACTCCACTCTCCTCGCCAGA.................................................2111.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAAT..........................................................................................2511.00107.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTAGA............................................................................................2411.008.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................GGTTTGGTAGAGCAGGTGTTGA............................................................................................2211.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATTGC.....................................................................................2511.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................AACTCCACTCTCCTCGCCTGT.................................................211.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................TGAGTACATCATGAGCC.1711.001.00---------------------------------------------------1.00---------------------------------------------------------------------------------------------
......................................................................TCCTAGGTTTGGTAGAGCAGGTGTT..............................................................................................2511.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------
............................................................................GTTTGGTAGAGCAGGTGTTGAGA..........................................................................................2311.001.00---------------------------------------------------------------1.00---------------------------------------------------------------------------------
...........................................................................................................................CCACTCTCCTCGCCAGT.................................................171.000.00----------------------------------------------------------------------------------------------------------------------------1.00--------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTAT............................................................................................2311.005.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTTT............................................................................................2311.005.001.00------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TTGGTAGAGCAGGTGTTGAGAAT........................................................................................2311.001.00--------------------------------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAT...........................................................................................2511.00114.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGATGA............................................................................................231.000.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------
...........................................................................GGTTTGGTAGAGCAGGTGTTGAG...........................................................................................2311.001.00---------------------------------------------------------------------------------------1.00---------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAAAA.........................................................................................2611.00107.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................ACTACTGGAACAATGAGT.............1811.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATTGCT....................................................................................2611.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TGGAACAATGAGTACATCATGAGCC.2511.001.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAGTTCT.......................................................................................2911.003.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAGA..........................................................................................2611.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAAAC.........................................................................................2611.00107.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TTGGTAGAGCAGGTGTCTC............................................................................................191.000.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................CCAGGTGGCGGAGCGGTCT...................................191.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................TTTGGTAGAGCAGGTGTTGAGAATT.......................................................................................2511.001.00-----------------------------------------------------1.00-------------------------------------------------------------------------------------------
.......................................................................CCTAGGTTTGGTAGAGCAGGTGTTGA............................................................................................2611.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------
........................................................................CTAGGTTTGGTAGAGCAGGTGT...............................................................................................2211.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGAGCGCGCCCTCTACTACT.........................2311.001.00---------------------------------------------------------------------------------------------------------------------------------1.00---------------
............................................................................GTTTGGTAGAGCAGGTGTTGA............................................................................................2111.001.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTAGA...........................................................................................2511.009.001.00------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................TACTACTGGAACAATGAGTACATCATGAGC..3011.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TCTACTACTGGAACAATGAGTACATC........2611.001.00--------------------------------------------------------------------------------------1.00----------------------------------------------------------
..................................................GTAAGAGCAGACTCACTGGTTCCTAG.................................................................................................................2611.001.00----------------------------------------------------------------------------------------------1.00--------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTT.............................................................................................2311.009.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................AACTCCACTCTCCTCGCCAG..................................................2011.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGT...............................................................................................2011.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTTA............................................................................................2311.005.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGA....2511.001.00------------------------------------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................TGGAACAATGAGTACATC........1820.500.50---0.50---------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGT.............1620.500.50---------------------------------------------------------------0.50---------------------------------------------------------------------------------

Antisense strand
AGCCGCTCTTCCGCCAGCTTGCCAAATGTGTTTCCAGCCCCCATTTCCAGGTAAGAGCAGACTCACTGGTTCCTAGGTTTGGTAGAGCAGGTGTTGAGAATTGCAGTGAGTGCCCACTCAACTCCACTCTCCTCGCCAGGTGGCGGAGCGCGCCCTCTACTACTGGAACAATGAGTACATCATGAGCCT
...........................................................................(((..((.((((..((.((((((....(((.....)))...)))))).)).))))))..)))....................................................
....................................................................69....................................................................139................................................
SizePerfect hitTotal NormPerfect NormSRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjTestesWT4()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjTestesWT1()
Testes Data. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjTestesWT2()
Testes Data. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR206942(GSM723283)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR206941(GSM723282)
other. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR073955(GSM629281)
total RNA. (blood)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
.............................................................CTCACTGGTTCCTAGGTTTGGTAGA....................................................................................................... 2517.007.00------7.00------------------------------------------------------------------------------------------------------------------------------------------
................................................AGGTAAGAGCAGACTCACTGGTTCCTA.................................................................................................................. 2715.005.00------------------------1.00----------------------------------------1.00-----1.001.00-------------------------------------------------1.00----------------------
.................................................GGTAAGAGCAGACTCACTGGTTCCTA.................................................................................................................. 2614.004.00------------------------1.00----------------------------------------1.00--------------------------------------------------------------1.00----1.00-----------
......................................................GAGCAGACTCACTGGTTCCTAGGTTTG............................................................................................................ 2711.001.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------
...............................TTCCAGCCCCCATTTCCAGGTAAG...................................................................................................................................... 2411.001.00---------------------------------------------------------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................TCTACTACTGGAACAATGAGTACATCA....... 2711.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------------
...........................................................GACTCACTGGTTCCTAGGTTTGGTA......................................................................................................... 2511.001.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................................GCGCCCTCTACTACTGGAACAATGAG.............. 2611.001.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CTACTACTGGAACAATGAGTACATCA....... 2611.001.00---------------------------------------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGAGCGCGCCCTCTACTACTGGAACA................... 2911.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------------
........TTCCGCCAGCTTGCCAAATGTGTTTCCA......................................................................................................................................................... 2811.001.00------------------------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CCCTCTACTACTGGAACAATGAGTACA.......... 2711.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------
...............AGCTTGCCAAATGTGTTTCCAGCCCCCA.................................................................................................................................................. 2811.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................CTCAACTCCACTCTCCTC....................................................... 1811.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CAACTCCACTCTCCTCGC..................................................... 1811.001.00--------------------------------------------------------------------------------------------------------------------------------------------1.00----
..........................................................................AGGTTTGGTAGAGCAGGTGTTGA............................................................................................ 2311.001.00---------------------------------------------------------------------------------------------------------------------------1.00---------------------
..............................................................................................................................................GCGGAGCGCGCCCTCTACTACTGGAACA................... 281.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------