ID: uc008awv.13
GENE: Pkd1(13)
chr17:24709363-24709612+


(1)
AGO.mut 		(1)
AGO1.ip 		(16)
AGO2.ip 		(3)
B-CELL 		(41)
BRAIN 		(2)
CELL-LINE 		(2)
DCR.mut 		(2)
DGCR8.mut 		(6)
EMBRYO 		(4)
ESC 		(4)
FIBROBLAST 		(1)
HEART 		(1)
KIDNEY 		(4)
LIVER 		(1)
LUNG 		(2)
LYMPH 		(6)
OTHER 		(7)
OTHER.mut 		(1)
PANCREAS 		(1)
PIWI.ip 		(1)
PIWI.mut 		(1)
SKIN 		(3)
SPLEEN 		(17)
TESTES 		(2)
TOTAL-RNA 		(1)
UTERUS

Sense strand
ATGCTTGTGTTGGTATTCGCTTCCATGTTCACCTTTATGCAGTTGTGCTTAGAAATGCTCCTATCCATTTTCTTGCTCGTTATGGACTCTTGGGTGCTCTGCCCCGTATATGCCTGGGTGTGAACACTGTGTCCATGGAGTAACAGGTGCTTGGTGGGGGTTCTGTGAGTAGGAAGTCCCACTTGGGCCTGTCTCCACAGGTGAGTACAACTTGACCGTCCTTGTGTCCAATACCTATGAGAATCTGACG
.......................................................................................................................................(((((..((((((.((.(((((((.((((.......)))).))))))).))))))))))))).....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR206941(GSM723282)
other. (brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesWT1()
Testes Data. (testes)		SRR206942(GSM723283)
other. (brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR206939(GSM723280)
other. (brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT2()
Testes Data. (testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR037905(GSM510441)
brain_rep2. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		mjTestesWT3()
Testes Data. (testes)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR014235(GSM319959)
2 dpp total. (testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR553586(SRX182792)
source: Testis. (testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037906(GSM510442)
brain_rep3. (brain)
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGT...............................................................................................22144.0044.00-2.002.002.005.002.00-1.001.001.00-2.001.001.00-1.001.002.001.001.00--1.00-2.00-1.00--1.00-2.00--1.00-1.00-1.00-1.00--2.00---------1.00---1.00-----------1.00--1.00-1.00-------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGT...............................................................................................21140.0040.00-5.003.001.00-2.00-2.001.00-8.001.00--5.00-1.00---1.00-----2.00---1.001.00---------1.00----------1.00-----1.00-----------------1.00----------1.00-------1.00----
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGG.............................................................................................23132.0032.00-2.001.00--1.00--3.003.00--1.00-----1.001.00--1.00-1.00-2.00---1.00-1.00-1.00--2.001.00--1.00------1.001.00----1.00---1.00--1.00-----------------------1.00-------1.00---1.00--
..............................................GCTTAGAAATGCTCCTATCCATTTTCTTGCTCGTTATGGACTCTTGGGTGCT........................................................................................................................................................52131.0031.0031.00---------------------------------------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGG................................................................................................21117.0017.00-2.00-2.002.001.00-1.00---1.00------1.00-1.00--1.00-----1.00--1.00---------------------------2.00-----------------------------1.00---------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGG.............................................................................................24117.0017.00-----1.00--1.00-------1.00--1.00---1.00----------1.001.001.00--2.00----2.00-----1.00----------------1.00-----1.00----1.00---------------1.00-----
......................................................................................................................................ATGGAGTAACAGGTGCTTGG................................................................................................20116.0016.00--1.001.00-1.00-3.00----1.00--1.002.00-1.00------------1.00-------------------1.00-------------------1.00-----------1.00-------1.00--------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTG..............................................................................................22110.0010.00--1.00-1.002.00------------------------------------3.00--2.00---1.00--------------------------------------------------
....................................................................................................................................................................................ACTTGGGCCTGTCTCCACAGT.................................................2118.004.00--1.001.00----1.00----1.00------1.00-----------1.00-----------------------1.00--------1.00----------------------------------
.......................................................................................................................................TGGAGTAACAGGTGCTTGGTGG.............................................................................................2218.008.00-1.001.00-----1.00---1.001.00---1.00-1.00---------1.00----------------------------------------------------------------------
.......................................................................................................................................................................AGTAGGAAGTCCCACTTGGG...............................................................2017.007.00------7.00---------------------------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGA.............................................................................................2317.0010.00-------------1.00-1.00--------1.00----------1.00----------------1.00--1.00------------------------1.00-------------------
..............................................................................GTTATGGACTCTTGGGTGCTCTGCCCCGTAT.............................................................................................................................................3116.006.00---------------------6.00------------------------------------------------------------------------------
.......................................................................................................................................TGGAGTAACAGGTGCTTGGT...............................................................................................2016.006.00-1.001.00----------1.00--1.00-----1.00------------------1.00----------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTG..............................................................................................2315.005.00--------1.00---------1.00---1.00---------1.00---------------1.00---------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGT.............................................................................................2415.005.00---------------1.00--------------------------------------1.00--1.00------------------------------1.00----------1.00
.....................................................................................................................................CATGGAGTAACAGGTGCTTG.................................................................................................2015.005.00---2.00--------------------------1.00------------------------------1.00------1.00-------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGA...............................................................................................2215.0017.00-1.00--1.00-----------1.00-----------------------1.00----------------------1.00------------------------------------
................................................................................................................................................................................TCCCACTTGGGCCTGTCTCCAC....................................................2214.004.00------------2.00--1.00-------------1.00----------------------------------------------------------------------
....................................................................................................................................................................................ACTTGGGCCTGTCTCCACAG..................................................2014.004.00--1.00------------------------------2.00-------------------1.00----------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGT.............................................................................................2313.0010.00-----1.00-----------1.00------------------------------------------------------------------------------1.00---
..............................................................................................................................................................................................................ACAACTTGACCGTCCTTGTGTCCAAT..................2613.003.00------3.00---------------------------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGGAT...........................................................................................2513.0032.00---------2.00-----------------------------------------------------------------------1.00------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTAA.............................................................................................2313.0040.00---1.00--------------1.00-----------1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................GACCGTCCTTGTGTCCAAT..................1913.003.00----------------------------3.00-----------------------------------------------------------------------
....................................................................................................................................CCATGGAGTAACAGGTGCTTGGTGGGGGTTCTGTGAGTAGGAAGTCCCACTTGGGCCTGTCTCCACAGA.................................................692.000.00-------------------------2.00--------------------------------------------------------------------------
..................................................................................................................................................................CTGTGAGTAGGAAGTCCCACTTGGGCCT............................................................2812.002.00-----------------------------------------------------------2.00----------------------------------------
................................................................................................................................................................................TCCCACTTGGGCCTGTCTCCACA...................................................2312.002.00---------1.00--------------1.00---------------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTT..............................................................................................2312.0044.00-----------------1.00----1.00-----------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGGG............................................................................................2412.002.00------------1.00--------------------------1.00------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTT..............................................................................................2212.0040.00---2.00------------------------------------------------------------------------------------------------
..............................................................................................................................................ACAGGTGCTTGGTGGGGGTTCTT.....................................................................................232.000.00-----------2.00----------------------------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGGA............................................................................................2512.0017.00-----------------------------------------------2.00----------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTAA.............................................................................................2412.0044.00---------------1.00----------------------------------------------1.00-------------------------------------
............................................................................................................................................TAACAGGTGCTTGGTGGGGGTTAT......................................................................................242.000.00---------2.00------------------------------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTA..............................................................................................2312.0044.00-------1.00---1.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................ACTTGGGCCTGTCTCCACAGA.................................................2112.004.00-------------------1.00---------------1.00----------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGA.............................................................................................2412.005.00-----------1.00--------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................TCCCACTTGGGCCTGTCTCCACT...................................................2312.004.00-------------1.00------1.00-------------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTT..................................................................................................1811.001.00----------------------------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................ACTTGGGCCTGTCTCCACAGTAT...............................................2311.004.00---------------------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................TTGACCGTCCTTGTGTCCAATACCGAT............271.000.00---------------------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................TACAACTTGACCGTCCTTGTGTCCAAT..................2711.001.00----------------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................GTGAGTACAACTTGACCGTC..............................2011.001.00--------------------------------------------------------------------------------------1.00-------------
...........................................................................................................................................GTAACAGGTGCTTGGTG..............................................................................................1711.001.00-----------------------1.00----------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGGA............................................................................................2411.0032.00--------------------------------------------------1.00-------------------------------------------------
................................................................................................................................................................................TCCCACTTGGGCCTGTCTT.......................................................191.000.00---------------------------------------------------------------------------1.00------------------------
............................................................................................................................................TAACAGGTGCTTGGTGGGGGTTAA......................................................................................241.000.00-----------------------1.00----------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGAG............................................................................................2411.0010.00-------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................AGTAACAGGTGCTTGGTGGGGA..........................................................................................221.000.00-----------------1.00----------------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGTAT...........................................................................................2511.0010.00------------------------------------------------------------------------------------1.00---------------
.......................................................................................................................................TGGAGTAACAGGTGCTTGGTGA.............................................................................................221.000.00--------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGAT............................................................................................2511.005.00------------------------------------------------------------------1.00---------------------------------
.......................................................................................................................................TGGAGTAACAGGTGCTTGGTGGGA...........................................................................................2411.001.00--------------------------------------------------------------------------------------------------1.00-
......................................................................................................................................ATGGAGTAACAGGTGCTCGGT...............................................................................................211.000.00--------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTT..................................................................................................1911.001.00------------------1.00---------------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGGT............................................................................................2411.0032.00--------------------------------------------------------1.00-------------------------------------------
.............................................................................................................................................AACAGGTGCTTGGTGGGGGTTC.......................................................................................2211.001.00--------------------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................ACTTGGGCCTGTCTCCACCGT.................................................211.000.00----------------------------------------------------------------1.00-----------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGGG............................................................................................2511.001.00------------------------------------1.00---------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGTC...............................................................................................2111.001.00--------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................AGTAACAGGTGCTTGGTTGGA...........................................................................................211.000.00--1.00-------------------------------------------------------------------------------------------------
.....................................TGCAGTTGTGCTTAGAAATGCTCCTATCC........................................................................................................................................................................................2911.001.00--------------------------------------------------------------------------------------------1.00-------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGGGGGT.........................................................................................2711.001.00------------1.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................CACTTGGGCCTGTCTCCACATT.................................................221.000.00----1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................TCCCACTTGGGCCTGTCTCC......................................................2011.001.00-----------------------1.00----------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTG.................................................................................................1911.001.00-------------------------------------------------------------------------------1.00--------------------
.............................................................................................................................................AACAGGTGCTTGGTGGGGGTT........................................................................................2111.001.00---------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................TCCCACTTGGGCCTGTCTCCA.....................................................2111.001.00-------------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................AGTAGGAAGTCCCACTTGGGCC.............................................................2211.001.00-----------------------------------------------------------------------------------------1.00----------
..............................................................................................................................................................................................................ACAACTTGACCGTCCTT...........................1711.001.00----------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTTGTG..............................................................................................2311.001.00----------------------------------------------------------------------------------1.00-----------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTGAT............................................................................................2411.0010.00-----------------1.00----------------------------------------------------------------------------------
............................................GTGCTTAGAAATGCTCCTATCCATTTTCTTGCTCGTTATGGACTCTTGGGTGCTCTGC....................................................................................................................................................5811.001.00-------------------------1.00--------------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGGGGGTTCTGTGAGTAGGAAGTCCCACTTGGGCCTGTCTCCACCG..................................................671.000.00-------------------------1.00--------------------------------------------------------------------------
............................................................................................................................................................................................................................CTTGTGTCCAATACCTATGAGAATCTGA..2811.001.00-----------------------------------------------------------------------------1.00----------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTGGGGGTTCTGTGAGTAGGAAGTCCCACTTGGGCCTGTCTCCACAG..................................................6711.001.00-------------------------1.00--------------------------------------------------------------------------
....................................ATGCAGTTGTGCTTAGAAATGCTCCT............................................................................................................................................................................................2611.001.00----------------------------------------------1.00-----------------------------------------------------
.......................................................................................................................................TGGAGTAACAGGTGCTTGG................................................................................................1911.001.00---------------------------------------------------1.00------------------------------------------------
.......................................................................................................................................TGGAGTAACAGGTGCTTGGTGGG............................................................................................2311.001.00-------------------1.00--------------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGTA..............................................................................................2211.0040.00----------------------1.00-----------------------------------------------------------------------------
......................................................................................................................................ATGGAGTAACAGGTGCTTGGA...............................................................................................2111.0016.00-1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................ACTTGACCGTCCTTGTGTCC.....................2011.001.00-------------------------------------------------------1.00--------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCT...................................................................................................1811.001.00-------1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................CACTTGGGCCTGTCTCCACAGT.................................................221.000.00----1.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................GTAACAGGTGCTTGG................................................................................................1550.200.20-----------0.20----------------------------------------------------------------------------------------
.........................................................................................................................................................GTGGGGGTTCTGTGA..................................................................................1590.110.11-------------------0.11--------------------------------------------------------------------------------

Antisense strand
ATGCTTGTGTTGGTATTCGCTTCCATGTTCACCTTTATGCAGTTGTGCTTAGAAATGCTCCTATCCATTTTCTTGCTCGTTATGGACTCTTGGGTGCTCTGCCCCGTATATGCCTGGGTGTGAACACTGTGTCCATGGAGTAACAGGTGCTTGGTGGGGGTTCTGTGAGTAGGAAGTCCCACTTGGGCCTGTCTCCACAGGTGAGTACAACTTGACCGTCCTTGTGTCCAATACCTATGAGAATCTGACG
.......................................................................................................................................(((((..((((((.((.(((((((.((((.......)))).))))))).))))))))))))).....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR206941(GSM723282)
other. (brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesWT1()
Testes Data. (testes)		SRR206942(GSM723283)
other. (brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR206939(GSM723280)
other. (brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT2()
Testes Data. (testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR037905(GSM510441)
brain_rep2. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		mjTestesWT3()
Testes Data. (testes)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR014235(GSM319959)
2 dpp total. (testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR553586(SRX182792)
source: Testis. (testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037906(GSM510442)
brain_rep3. (brain)
................................................................................TATGGACTCTTGGGTTCGA....................................................................................................................................................... 194.000.00---------------------------4.00------------------------------------------------------------------------
.....................................................................................................................................CATGGAGTAACAGGTGCTTGGTG.............................................................................................. 2311.001.00----------------------------------------------------------------------1.00-----------------------------
.................................................................................................................................................................................CCCACTTGGGCCTGTCCT....................................................... 181.000.00----------1.00-----------------------------------------------------------------------------------------