ID: uc007ypu.14
GENE: Eif2b5(15)
chr16:20508843-20509083+


(1)
AGO1.ip
(7)
AGO2.ip
(12)
B-CELL
(23)
BRAIN
(1)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(9)
EMBRYO
(10)
ESC
(3)
FIBROBLAST
(1)
KIDNEY
(5)
LYMPH
(21)
OTHER
(4)
OTHER.mut
(4)
PIWI.ip
(2)
PIWI.mut
(8)
SPLEEN
(22)
TESTES
(1)
THYMUS
(4)
TOTAL-RNA
(1)
UTERUS

Sense strand
GCCAAAGAGACACAACTGACGAAGGCCAGCAGTTACGGAAGAATCAACAGGTACGCTGCCCTCTGCTCCCTGGATCCCGAGTCCTCCACTGGAAACTCTAGGACTCTGTGGCCAGAACTGTTTATCTGCTAACAGGAACAGTGGGAATGCGTGGTTCTCTCCTAGCAGCTGTCCCCTCTGCTTCCTTGCAGCTGCAGAGGTTCATCCAGTGGCTGAGAGAGGCAGAAGAAGAGTCATCCGA
.............................................................................................................................((((....((((((((.((((.(((..((......))..)))....))))..))).))))).))))..................................................
.............................................................................................................................126..............................................................191................................................
SizePerfect hitTotal NormPerfect NormSRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR206941(GSM723282)
other. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039610(GSM527274)
small RNA-Seq. (brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR073954(GSM629280)
total RNA. (blood)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesWT2()
Testes Data. (testes)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR206940(GSM723281)
other. (brain)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
..................................................................................................................................AACAGGAACAGTGGGAATGCGT.........................................................................................22137.0037.00-6.002.001.002.00-1.00--1.00-2.00----2.00----3.001.003.00-1.00-3.00--------1.00----------1.00--1.00--------------1.00-----------1.00-------1.00-------------------1.00------1.00---1.00----
...................................................................................................................................ACAGGAACAGTGGGAATGCGT.........................................................................................21118.0018.00--1.001.00-----1.00--4.00----1.00--4.00---------------------1.001.00----------------1.00-------------------------------1.001.00----1.00----------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTG........................................................................................23117.0017.00--1.00-1.00-----1.002.00------1.00-----1.001.00-----1.00-----1.00--1.00---1.00--1.00-------------------------1.00-----1.00-----------1.00-----------1.00-----------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGT.......................................................................................24111.0017.00--1.00-1.001.00-----------2.00------------1.00--------1.00--------------------------1.00---1.00------------1.00-----1.00-------------------------------
.........................................................................................................................................................................TGTCCCCTCTGCTTCCTTGCAGT.................................................23111.001.00---1.00---------1.00--------------------1.00---2.00-------------------1.001.00---------------1.00------------------------------1.00-------1.00--1.00---
.................................................................................................................................TAACAGGAACAGTGGGAATGC...........................................................................................21110.0010.00-2.00-----------1.00-------1.00----2.00------------------1.00---------2.00--1.00--------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGG.......................................................................................2218.008.00---2.00--1.00----------------------------1.00---------------1.00-1.00---2.00---------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTGT.......................................................................................2318.007.00-------------------------1.00----1.00--------1.00------------1.00-------1.001.00---------1.00-------------------------------------1.00-----------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTG........................................................................................2217.007.00------------------1.00-----------1.00------------------1.00--------------1.00----1.00------------------1.00---------------------1.00----------
....................................................................................................................................CAGGAACAGTGGGAATGCGT.........................................................................................2017.007.00----------------2.00----------------3.00---------1.00-------1.00---------------------------------------------------------------------
.................................TACGGAAGAATCAACAG...............................................................................................................................................................................................1726.506.50-4.00--------0.50-----------0.50-----------0.50---------------------------0.50-------------------------------------------------------0.50--
................................TTACGGAAGAATCAACAG...............................................................................................................................................................................................1816.006.00--------5.00-------------------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CATCCAGTGGCTGAGAGAGGCAGAAG.............2615.005.005.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGT......................................................................................2314.004.00---------1.00------------1.00-------------------------1.00-----1.00------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTGA.......................................................................................2314.007.00--1.00---------------1.00-------------------------------------------------------------------1.00-----------------1.00----------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGA.......................................................................................2414.0017.00--1.00-2.00--------------------------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTG........................................................................................2113.003.00--1.00---------------------------------------------------------------------------------------------1.00----------------1.00-------
..................................................................................................................................AACAGGAACAGTGGGAATGC...........................................................................................2013.003.00---------1.00----------------1.00-------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAAG..........2713.003.00-------1.00--1.00-----------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCG..........................................................................................2113.003.00------1.00------------------------1.00----------------------------------------------1.00------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGT.......................................................................................2212.003.00---------1.00-----------------------------------------------------------------------------------------1.00---------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTGGT......................................................................................2212.002.00---1.00-1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TCATCCAGTGGCTGAGAGAGGCAGAAGA............2812.002.002.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GTTCATCCAGTGGCTGAGA.......................1912.002.00-----------------------------2.00-------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTT.....................................................................................2412.002.00--1.00---------------------------------------------------------------------------------1.00------------------------------------
................................................................................................TCTAGGACTCTGTGGCCAGAACTGTTTATCTGCTAACAGGAACAGTGGGAATGCGTGGTTCTCTCCTAGCAGCTGTCCCCTCTGCTTCCTTGCAG..................................................9512.002.00--------------------------------------------------------2.00----------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGA............2512.002.00---------------1.00-------------------------------------------------------------------------------1.00-------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAA...........2612.002.00----------------------------------------------------------------------------------1.00-------------------1.00------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGA.......................................................................................2212.003.00-----1.00---------------------------------------------------------1.00---------------------------------------------------------
..CAAAGAGACACAACTGACGAAGGCCAGC...................................................................................................................................................................................................................2811.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................TAACAGGAACAGTGGGAATGTA..........................................................................................221.000.00-----------------------------------------------------------------------------------------------------------1.00-------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGCAGAAGAAGAG........3011.001.00------------------------------------------------1.00------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGAGGTTCATCCAGTGGCTGAGAG......................2711.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAAGAG........2911.001.00----------1.00--------------------------------------------------------------------------------------------------------------
...AAAGAGACACAACTGACGAAGGCCAGCA..................................................................................................................................................................................................................2811.001.00----------1.00--------------------------------------------------------------------------------------------------------------
..................................................GTACGCTGCCCTCTGCTCCCTGGAT......................................................................................................................................................................2511.001.00---------------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CAGTGGCTGAGAGAGGCAGAAGAAG..........2511.001.00----------------------------------------------------------------------------------------------1.00--------------------------
...............................................................................................................................................................................................................AGTGGCTGAGAGAGGCAGAAGAAG..........2411.001.00----------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCG..........................................................................................1911.001.00----1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTAA.......................................................................................2211.007.00------------------------------------------------------------------------1.00------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGAA......................................................................................................................................................................................................2711.001.00---------------1.00---------------------------------------------------------------------------------------------------------
.......................................AGAATCAACAGGTACGCTGCCCTC..................................................................................................................................................................................2411.001.00-------------------------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................TAACAGGAACAGTGGGAAT.............................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------1.00-----
.............AACTGACGAAGGCCAGCAGTTACGGAA.........................................................................................................................................................................................................2711.001.00------------------------------------1.00------------------------------------------------------------------------------------
.........ACACAACTGACGAAGGCCAGCAGTTAC.............................................................................................................................................................................................................2711.001.00------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTGGTG.....................................................................................2311.002.00----------------------------------------------------1.00--------------------------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGTAA.....................................................................................2611.0017.00-----1.00-------------------------------------------------------------------------------------------------------------------
..........................CAGCAGTTACGGAAGAA......................................................................................................................................................................................................1711.001.00----------------------------------------------1.00--------------------------------------------------------------------------
...............................................................................................................................GCTAACAGGAACAGTGGGAATGCGTG........................................................................................2611.001.00------1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGTGGGAATGCGTGGA......................................................................................181.000.00---------------------------------------------------------------------------------------------------------------1.00---------
........................................................................................................................................................................................................TTCATCCAGTGGCTGAGAGAGGCAGAA..............2711.001.00-------------------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTG........................................................................................2011.001.00-----1.00-------------------------------------------------------------------------------------------------------------------
...............................GTTACGGAAGAATCAACAG...............................................................................................................................................................................................1911.001.00----------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTTTT...................................................................................2611.002.00---1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTAT....................................................................................2511.004.00---1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TGTCCCCTCTGCTTCCTTGCATA.................................................231.000.00------------------------------------------------------------------------------------------1.00------------------------------
.......................................................................................................................................................................................................GTTCATCCAGTGGCTGAGAGAGGCAGA...............2711.001.00--------------------------------------------------------------------------1.00----------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTAA....................................................................................2511.004.00-----------------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGAAA.....................................................................................2411.003.00-----1.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTGC.......................................................................................2311.007.00---1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................AACTCTAGGACTCTGCATT.................................................................................................................................191.000.00-------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGCAGAAGAAGA.........2911.001.00----------------------------------------------------------------------------1.00--------------------------------------------
....................GAAGGCCAGCAGTTACGGAAGAATTT...................................................................................................................................................................................................261.000.00-------------------------------------------------------------------1.00-----------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGCGT.......................................................................................2411.003.00-----------------1.00-------------------------------------------------------------------------------------------------------
...................CGAAGGCCAGCAGTTACGGAAGAATC....................................................................................................................................................................................................2611.001.00---------------------------------------------------------------------------------1.00---------------------------------------
.................................................................................................................................TAACAGGAACAGTGGGAATGCAT.........................................................................................2311.0010.00---------------------------------------------------------------------------------------1.00---------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGTAT.....................................................................................2411.003.00--1.00----------------------------------------------------------------------------------------------------------------------
....AAGAGACACAACTGACGAAGGCCAGCA..................................................................................................................................................................................................................2711.001.00-----------------------------------------1.00-------------------------------------------------------------------------------
..................ACGAAGGCCAGCAGTTACG............................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------------1.00-------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGAA.....................................................................................2411.008.00------------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TGGCTGAGAGAGGCAGAAGAAGAGTCATC...2911.001.00-------------------1.00-----------------------------------------------------------------------------------------------------
.CCAAAGAGACACAACTGACGAAGGCCA.....................................................................................................................................................................................................................2711.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
...............................GTTACGGAAGAATCAACA................................................................................................................................................................................................1811.001.00-----------------------------------------------------1.00-------------------------------------------------------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTGGTATA...................................................................................2511.002.00--1.00----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GTGGCTGAGAGAGGCAGAAGT............211.000.00--------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TGTCCCCTCTGCTTCCTTGCAG..................................................2211.001.00-------------------------------------------------1.00-----------------------------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAAT.............................................................................................1811.001.00--------------------------------------------1.00----------------------------------------------------------------------------
...................................................................................................................................................................AGCAGCTGTCCCCTCTGCTTCCTTGCAG..................................................2811.001.00-----------------------------------1.00-------------------------------------------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGG.......................................................................................................................................................................................................261.000.00-------------------1.00-----------------------------------------------------------------------------------------------------
.............................................................TCTGCTCCCTGGATCCCGAGTCCTC...........................................................................................................................................................2511.001.00--------------------------------------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................................................................CATCCAGTGGCTGAGAGAGGCAGAA..............2511.001.00------------------------------------------1.00------------------------------------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGAAT.....................................................................................................................................................................................................2811.001.00-------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................CTGGAAACTCTAGGACTCTGTGGCCAGAAC...........................................................................................................................3011.001.00------------------------------------------------------------------------------------------------------------1.00------------
................................................................................................................................................................................................................GTGGCTGAGAGAGGCAGAAGAA...........2211.001.00------------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CCAGTGGCTGAGAGAGTT..................181.000.00-----------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAG.............2411.001.00---------------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................GTGGTTCTCTCCTAGCAGCT.......................................................................2011.001.00----------------------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TCATCCAGTGGCTGAGAGATGC..................221.000.00--------------------------------------------------1.00----------------------------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGTA......................................................................................2511.0017.00----1.00--------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................GCTGTCCCCTCTGCTTCCTTG.....................................................2111.001.00--------------------------------------------------------------------1.00----------------------------------------------------
..............................AGTTACGGAAGAATCAACAG...............................................................................................................................................................................................2011.001.00----------------------------------------------1.00--------------------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAAGA.........2811.001.00--------------------------------1.00----------------------------------------------------------------------------------------
......................AGGCCAGCAGTTACGGAAGAATCAACAG...............................................................................................................................................................................................2811.001.00-----------------------------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGTGGCTGAGAGAGGCAGAAGAAGA.........2511.001.00--------------------------------1.00----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGC..................2011.001.00-------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGCAGAAGAA...........2711.001.00--------------1.00----------------------------------------------------------------------------------------------------------
................................................................................................................................................GAATGCGTGGTTCTCTCCTAGC...........................................................................2211.001.00--------------------------------------------------------------1.00----------------------------------------------------------
........................GCCAGCAGTTACGGAAGAATCAA..................................................................................................................................................................................................2311.001.00--------------1.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGC...........................................................................................1911.001.00---1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TCATCCAGTGGCTGAGAGAGGCAGAAA.............271.000.00--------------1.00----------------------------------------------------------------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGAATCA...................................................................................................................................................................................................3011.001.00------------------------------------------------------1.00------------------------------------------------------------------
..............................................................................................................................................................................................................CAGTGGCTGAGAGAGGC..................1720.500.50-----------------------------------------------------------------------------------------------------------------------0.50-
.........................................................................................................................................ACAGTGGGAATGCGTG........................................................................................1620.500.50-------------------------------------------------------------0.50-----------------------------------------------------------
..................................ACGGAAGAATCAACAGCTGA...........................................................................................................................................................................................2050.200.20------------------------------------------------------------------------------------------------------------------------0.20
..................................ACGGAAGAATCAACAG...............................................................................................................................................................................................1650.200.20----------0.20--------------------------------------------------------------------------------------------------------------

Antisense strand
GCCAAAGAGACACAACTGACGAAGGCCAGCAGTTACGGAAGAATCAACAGGTACGCTGCCCTCTGCTCCCTGGATCCCGAGTCCTCCACTGGAAACTCTAGGACTCTGTGGCCAGAACTGTTTATCTGCTAACAGGAACAGTGGGAATGCGTGGTTCTCTCCTAGCAGCTGTCCCCTCTGCTTCCTTGCAGCTGCAGAGGTTCATCCAGTGGCTGAGAGAGGCAGAAGAAGAGTCATCCGA
.............................................................................................................................((((....((((((((.((((.(((..((......))..)))....))))..))).))))).))))..................................................
.............................................................................................................................126..............................................................191................................................
SizePerfect hitTotal NormPerfect NormSRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR206941(GSM723282)
other. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039610(GSM527274)
small RNA-Seq. (brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR073954(GSM629280)
total RNA. (blood)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesWT2()
Testes Data. (testes)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR206940(GSM723281)
other. (brain)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
....................................GGAAGAATCAACAGGTAAG.......................................................................................................................................................................................... 196.000.006.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATCTA.......................................................................................... 201.000.00------------------------1.00------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................CAGAGGTTCATCCAGGGG............................. 181.000.00--------------------------------1.00----------------------------------------------------------------------------------------
...................................................................................................................................................................................GCTTCCTTGCAGCTGCAGAGGTTCATCCA................................. 2911.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
......................................AAGAATCAACAGGTAGCA......................................................................................................................................................................................... 181.000.00---------------------------------------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................GCAGCTGTCCCCTCTGGGA.......................................................... 191.000.00-------------------------------------------------------------------------------------------------1.00-----------------------
....................................GGAAGAATCAACAGGTACGG......................................................................................................................................................................................... 201.000.00----------------------------------------------------------------------------------------------------1.00--------------------