ID: uc007wxe.2
GENE: Zc3h7b(3)
chr15:81599247-81599463+


(1)
AGO.mut 		(3)
AGO2.ip 		(3)
B-CELL 		(10)
BRAIN 		(1)
CELL-LINE 		(1)
DGCR8.mut 		(9)
EMBRYO 		(5)
ESC 		(2)
FIBROBLAST 		(1)
HEART 		(2)
KIDNEY 		(4)
LIVER 		(1)
LUNG 		(1)
LYMPH 		(7)
OTHER 		(8)
OTHER.mut 		(6)
PIWI.ip 		(3)
PIWI.mut 		(5)
SPLEEN 		(30)
TESTES

Sense strand
TCTCTTTTCCCACTAGGTCAACACTACCCCTGAAGCAAGAGGAGTATGAGGTGAGTGTCGCTGTGGTGGGTGGATGCGGTGAGGGCTGCTGTGCTCAGGGCAGAGGGCTGGGACTGAGCCAGGCTGGATGGAGACCCGCTTAGTCCCCTCGGACCTGCCTTGCGCAGGCTTTCCTGCTCAAGCTTGTGCAGAACCTGTTTGCCGAGGGCAACGACCT
...........................................................................................(((.((((((((.(((..((((((((((..((((......)).)).)))))))))))))....)))))))).)))...................................................
.........................................................................................90...........................................................................167................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		mjTestesWT4()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR206942(GSM723283)
other. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		mjTestesWT1()
Testes Data. (testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR206941(GSM723282)
other. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059771(GSM562833)
CD4_control. (spleen)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
..............................................................................................TCAGGGCAGAGGGCTGGGACTGT....................................................................................................23119.001.0011.003.00-2.00--------------2.00----------------------------------------1.00---------------------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTGC......................................................24114.0014.001.001.001.001.00---3.00-----1.00---1.00--2.00------1.00--1.00--------1.00-----------------------------------------
.........................ACCCCTGAAGCAAGAGGAGT............................................................................................................................................................................20113.0013.00-----3.00---3.001.00------------2.00----2.00--------------------1.00---------------------------1.00---
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTG.......................................................23112.0012.00--3.00--------------1.00--1.00------1.00--2.00----1.00----2.00---------------1.00------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGA....................................................................................................2317.007.003.001.00-1.00-----------------------------------------------------------------1.00------1.00----
...............................................................................................................................................TCCCCTCGGACCTGCCTTGCGCT...................................................2316.004.00----6.00----------------------------------------------------------------------------
................................................................................................................ACTGAGCCAGGCTGGATGGAGT...................................................................................2215.002.00-----------5.00---------------------------------------------------------------------
........................................................................................................................................................................................TGTGCAGAACCTGTTTGCCGAGGGCAAC.....2815.005.00------2.00---------1.00--------1.00---------1.00---------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAG...................................................................................................2415.005.002.00-----------------2.00---------------------------1.00----------------------------------
........................TACCCCTGAAGCAAGAGGAGTATGAGGCT....................................................................................................................................................................2915.002.00------2.00-1.00-----------------------------1.00----------------1.00-------------------------
............................................................................................................................................TAGTCCCCTCGGACCTGCCTTGC......................................................2314.004.001.00----------------------------------------------1.00----------------1.00--------1.00-------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTGA......................................................2414.0012.00-------2.00---------1.00---------1.00-----------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAT...................................................................................................2414.007.004.00--------------------------------------------------------------------------------
...............................................................................................CAGGGCAGAGGGCTGGGACTGA....................................................................................................2214.004.003.00-------1.00------------------------------------------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGT....................................................................................................2414.001.002.00------------------------------1.00----------1.00--------------------------------------
...........................................................................................................................................................................................GCAGAACCTGTTTGCCGAGGGC........2214.004.00-----1.00----1.00-----------1.00---------1.00------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGTTT..................................................................................................2514.001.003.001.00-------------------------------------------------------------------------------
...............................................................................................................................................TCCCCTCGGACCTGCCTTGCGC....................................................2214.004.002.00----------------------------------------------------1.00-----------1.00---------------
............................................................................................................................................TAGTCCCCTCGGACCTGCCTTGCGC....................................................2514.004.001.001.001.00-----------------1.00------------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAAT..................................................................................................2513.007.002.001.00-------------------------------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGTT...................................................................................................2413.001.002.001.00-------------------------------------------------------------------------------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTGCG.....................................................2513.003.002.00------------------------------1.00-------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGTAA..................................................................................................2513.001.002.001.00-------------------------------------------------------------------------------
........................TACCCCTGAAGCAAGAGGAGTATGAGGC.....................................................................................................................................................................2813.002.00------------2.00------------------------------------------------------1.00-------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAA...................................................................................................2413.007.003.00--------------------------------------------------------------------------------
..............................TGAAGCAAGAGGAGTATGAGGCTTT..................................................................................................................................................................253.000.00-------------------------1.002.00------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGTAAT.................................................................................................2612.001.001.00-----------------------------------------------1.00--------------------------------
........................TACCCCTGAAGCAAGAGGAGTATGAGG......................................................................................................................................................................2712.002.00----------------1.00------------1.00---------------------------------------------------
...........................CCCTGAAGCAAGAGGAGTA...........................................................................................................................................................................1912.002.00----------------------------------2.00----------------------------------------------
....................................................................................................................................................................................AGCTTGTGCAGAACCTGTTTGCCGAG...........2612.002.00------1.00---------1.00----------------------------------------------------------------
.........................................................................................................................................................................................GTGCAGAACCTGTTTGCCGAGGGC........2412.002.00----------1.00---------------------1.00------------------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGTAAA.................................................................................................2712.001.00-------------2.00-------------------------------------------------------------------
............................CCTGAAGCAAGAGGAGTATG.........................................................................................................................................................................2012.002.00---2.00-----------------------------------------------------------------------------
............................CCTGAAGCAAGAGGAGTATGAGGCTTT..................................................................................................................................................................272.000.00------------------------1.00------------1.00-------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAGT..................................................................................................2512.005.001.00------------------------1.00-------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGTA...................................................................................................2412.001.001.00-------1.00------------------------------------------------------------------------
................................................................................................AGGGCAGAGGGCTGGGACTGA....................................................................................................2112.002.00---------------------------------2.00-----------------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGTTT..................................................................................................2612.001.001.001.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................TTGTGCAGAACCTGTTTGCCGAGGGCAAC.....2912.002.00------1.00---------1.00----------------------------------------------------------------
..........................................................................................................GCTGGGACTGAGCCAGGCTGGATGGAGACC.................................................................................3012.002.00----2.00----------------------------------------------------------------------------
................................................................................................................ACTGAGCCAGGCTGGATGGAG....................................................................................2112.002.001.00----1.00---------------------------------------------------------------------------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTGCGT....................................................2612.003.00-----------------------------1.00---------1.00-----------------------------------------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTGCGCT...................................................272.000.00--2.00------------------------------------------------------------------------------
...............................................................................................................................................TCCCCTCGGACCTGCCTTGCGCAGT.................................................252.000.001.00--------1.00-----------------------------------------------------------------------
..........................CCCCTGAAGCAAGAGGAGTATG.........................................................................................................................................................................2212.002.00-----------------------------------------2.00---------------------------------------
..........................................................................................................................................................................................TGCAGAACCTGTTTGCCGAGGGCAACGAC..2912.002.00------------------------1.00------------1.00-------------------------------------------
.........................ACCCCTGAAGCAAGAGGAGTAT..........................................................................................................................................................................2212.002.00-----------------------1.00----1.00----------------------------------------------------
.....................................................................................................AGAGGGCTGGGACTGAGC..................................................................................................1812.002.00-------2.00-------------------------------------------------------------------------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTGT......................................................2412.0012.00--1.00-------------------------------------------------------------------1.00----------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTTGGA.....................................................2512.0012.00-------------2.00-------------------------------------------------------------------
...............................................................................................CAGGGCAGAGGGCTGGGACTGAGC..................................................................................................2412.002.001.00--------------------1.00-----------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTAA....................................................................................................2311.001.001.00--------------------------------------------------------------------------------
...........................CCCTGAAGCAAGAGGAGT............................................................................................................................................................................1811.001.00------------------------------------------------------1.00--------------------------
........................................................................................................................................................................................TGTGCAGAACCTGTTTGCCGAGGGCAA......2711.001.001.00--------------------------------------------------------------------------------
...........................................................................................................................................TTAGTCCCCTCGGACCTGCCTT........................................................2211.001.00-------------------1.00-------------------------------------------------------------
............................................................................................................................................................................................CAGAACCTGTTTGCCGAGGGCAAC.....2411.001.00----------------------------------------------------1.00----------------------------
...............................................................................................................................................TCCCCTCGGACCTGCCTTGCGCAGA.................................................251.000.00---------1.00-----------------------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGTAG..................................................................................................2511.001.001.00--------------------------------------------------------------------------------
.........................ACCCCTGAAGCAAGAGGAG.............................................................................................................................................................................1921.001.00----------0.50---------------------------------------------------------------------0.50
............................................................................CGGTGAGGGCTGCTGGT............................................................................................................................171.000.00--------------1.00------------------------------------------------------------------
...............................................................................................................................................................................................AACCTGTTTGCCGAGGGCA.......1911.001.00---------------------------------------------------------------------------1.00-----
...............................GAAGCAAGAGGAGTATGAGGTGAGTGTC..............................................................................................................................................................2811.001.00----------------------------------------------------------1.00----------------------
...............................................................................................CAGGGCAGAGGGCTGGGACTGAGCTA................................................................................................2611.002.00-1.00-------------------------------------------------------------------------------
...................................................................................................................................................................................AAGCTTGTGCAGAACCTGTTTGCCGAGGGCA.......3111.001.00--------------------------------------------------------------1.00------------------
..........................................................................................................................................CTTAGTCCCCTCGGACCTGCCTTTC......................................................251.000.001.00--------------------------------------------------------------------------------
.............................CTGAAGCAAGAGGAGTATGAGGCT....................................................................................................................................................................241.000.00--------------------------------------------1.00------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGTTAT.................................................................................................2711.001.00---------------------------------------------------1.00-----------------------------
.................................................................................................................................................................GCGCAGGCTTTCCTGTG.......................................171.000.00---------------------------------------------1.00-----------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTAT....................................................................................................2311.001.001.00--------------------------------------------------------------------------------
.................................................................................................GGGCAGAGGGCTGGGACTGAGCCA................................................................................................2411.001.00--------------------------------------------------1.00------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGAT.......................................................................................................201.000.00--------1.00------------------------------------------------------------------------
...............................................................................................................................................TCCCCTCGGACCTGCCTTGCGCAGTAT...............................................271.000.00----------1.00----------------------------------------------------------------------
..................................................GTGAGTGTCGCTGTGGTGGGTGGA...............................................................................................................................................2411.001.00------------1.00--------------------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAGA..................................................................................................2511.005.001.00--------------------------------------------------------------------------------
.........................................................TCGCTGTGGTGGGTGCTT..............................................................................................................................................181.000.00--------------1.00------------------------------------------------------------------
................................................................................................................ACTGAGCCAGGCTGGATGGAA....................................................................................211.000.00---1.00-----------------------------------------------------------------------------
...................................................TGAGTGTCGCTGTGGTGGGTGGATG.............................................................................................................................................2511.001.00------------------------1.00--------------------------------------------------------
.........................................................................................................................................................................................GTGCAGAACCTGTTTGCCGAGGGCAACGACC.3111.001.00-------------------------------------------1.00-------------------------------------
............................................................................................................TGGGACTGAGCCAGGTG............................................................................................171.000.00--------------1.00------------------------------------------------------------------
...............................................................................................................GACTGAGCCAGGCTGGATGGT.....................................................................................211.000.001.00--------------------------------------------------------------------------------
...............................................................................................................................................................................GCTCAAGCTTGTGCAGAACCTG....................2211.001.00--------1.00------------------------------------------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTG.....................................................................................................2311.001.00------------------------------------------1.00--------------------------------------
............................CCTGAAGCAAGAGGAGTATGAGGCTT...................................................................................................................................................................261.000.00---------------1.00-----------------------------------------------------------------
................................AAGCAAGAGGAGTATGAG.......................................................................................................................................................................1811.001.00------------------------------------------------------------------------1.00--------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGTA...................................................................................................2511.001.00-----1.00---------------------------------------------------------------------------
...................AACACTACCCCTGAAGCA....................................................................................................................................................................................1811.001.00-------------------------------------------1.00-------------------------------------
................................................................................................................................................CCCCTCGGACCTGCCTTGCG.....................................................2011.001.00--1.00------------------------------------------------------------------------------
...............................................................................................CAGGGCAGAGGGCTGGGACTGAG...................................................................................................2311.001.001.00--------------------------------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTG.....................................................................................................2211.001.001.00--------------------------------------------------------------------------------
................GTCAACACTACCCCTGAAGC.....................................................................................................................................................................................2011.001.00---------------1.00-----------------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGG.........................................................................................................1821.001.00-0.50-----------------------------------------------------------------------------0.50-
..............................................................................................TCAGGGCAGAGGGCTGGGACT......................................................................................................2111.001.001.00--------------------------------------------------------------------------------
...............................................................................................................GACTGAGCCAGGCTGGATGGAG....................................................................................2211.001.00--------------------------------------------------------------------1.00------------
.......................................................................................................................................................................................TTGTGCAGAACCTGTTTGCCGAGGGCA.......2711.001.00--------------------------1.00------------------------------------------------------
..................................................................................................................................................CCTCGGACCTGCCTTGCGCAA..................................................211.000.00---1.00-----------------------------------------------------------------------------
........................TACCCCTGAAGCAAGAGGAGTATGAG.......................................................................................................................................................................2611.001.00---------------------------------------------------------1.00-----------------------
............................................................................................................................................TAGTCCCCTCGGACCTGCCTTGCGT....................................................251.000.00------------1.00--------------------------------------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGCAAT.................................................................................................2711.001.00-----------------------------1.00---------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGTAT..................................................................................................2511.001.00-1.00-------------------------------------------------------------------------------
...............................................................................................................................................TCCCCTCGGACCTGCCTTGCGCA...................................................2311.001.00-------------------------------1.00-------------------------------------------------
...............................................................................................CAGGGCAGAGGGCTGGGACTGAGCA.................................................................................................2511.002.00--------------------------------------------------------------------------1.00------
..........................................................................................................................................................................................TGCAGAACCTGTTTGCCGAGGGCAAC.....2611.001.00--------------------------------------1.00------------------------------------------
............................................................................................................................................TAGTCCCCTCGGACCTGCCTTG.......................................................2211.001.00-----------------1.00---------------------------------------------------------------
............................CCTGAAGCAAGAGGAGTATGAGGC.....................................................................................................................................................................241.000.00---------------1.00-----------------------------------------------------------------
............................................................................................................................................................................................CAGAACCTGTTTGCCGAGGGCAACG....2511.001.00-------------------------------------------------------------1.00-------------------
...........................................................................................TGCTCAGGGCAGAGGGCTGGGACTGA....................................................................................................2611.001.00------1.00--------------------------------------------------------------------------
................................................................................................AGGGCAGAGGGCTGGGACTGAG...................................................................................................2211.001.001.00--------------------------------------------------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGA....................................................................................................2411.001.001.00--------------------------------------------------------------------------------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAGCC.................................................................................................2611.001.001.00--------------------------------------------------------------------------------
...............................................................................................................................................................................GCTCAAGCTTGTGCAGAACCT.....................2111.001.00----------------------1.00----------------------------------------------------------
...............................................................................................................................................................................................AACCTGTTTGCCGAGGGCAAC.....2111.001.00-------------------1.00-------------------------------------------------------------
....................................AAGAGGAGTATGAGGCTTT..................................................................................................................................................................191.000.00------------------------------------------------------------------1.00--------------
.......................................AGGAGTATGAGGTGAGTGTCGCTGTGGTGGGTGGATGCGGTGAGGGCTGCTGTGCTCAGGGCAGAGGGCTGGGACTGAGCCAGGCTGGATGGAG....................................................................................9411.001.00-----------------------------------------------------------------------1.00---------
..............................................................................................TCAGGGCAGAGGGCTGGGACTGAGC..................................................................................................2511.001.00----------------1.00----------------------------------------------------------------
.............................................................................................CTCAGGGCAGAGGGCTGGGACTGAG...................................................................................................2511.001.00--------1.00------------------------------------------------------------------------
..................................GCAAGAGGAGTATGAGGCT....................................................................................................................................................................191.000.00------------------------------------------------------------1.00--------------------
........................TACCCCTGAAGCAAGAGGAGTATGAGGCTT...................................................................................................................................................................3011.002.00--------1.00------------------------------------------------------------------------
................................................................................................................ACTGAGCCAGGCTGGGAT.......................................................................................181.000.00--------------1.00------------------------------------------------------------------
..............................TGAAGCAAGAGGAGTATGAGGC.....................................................................................................................................................................221.000.00---------------1.00-----------------------------------------------------------------
.............................CTGAAGCAAGAGGAGTATGAG.......................................................................................................................................................................2111.001.00---------------1.00-----------------------------------------------------------------
....................................................................................................................................................TCGGACCTGCCTTGCGCAGTTT...............................................221.000.00----------1.00----------------------------------------------------------------------
............................CCTGAAGCAAGAGGAGT............................................................................................................................................................................1720.500.50------------------------------------------------------------------------------0.50--
.........................ACCCCTGAAGCAAGAGGA..............................................................................................................................................................................1820.500.50-----0.50---------------------------------------------------------------------------

Antisense strand
TCTCTTTTCCCACTAGGTCAACACTACCCCTGAAGCAAGAGGAGTATGAGGTGAGTGTCGCTGTGGTGGGTGGATGCGGTGAGGGCTGCTGTGCTCAGGGCAGAGGGCTGGGACTGAGCCAGGCTGGATGGAGACCCGCTTAGTCCCCTCGGACCTGCCTTGCGCAGGCTTTCCTGCTCAAGCTTGTGCAGAACCTGTTTGCCGAGGGCAACGACCT
...........................................................................................(((.((((((((.(((..((((((((((..((((......)).)).)))))))))))))....)))))))).)))...................................................
.........................................................................................90...........................................................................167................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		mjTestesWT4()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR206942(GSM723283)
other. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		mjTestesWT1()
Testes Data. (testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR206941(GSM723282)
other. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059771(GSM562833)
CD4_control. (spleen)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
........................................................................................................................................................................................................GCCGAGGGCAACG.... 1362.172.17---------------------1.17-----------------------------------------1.00-----------------
.............TAGGTCAACACTACCCCTGAAGCAA................................................................................................................................................................................... 2512.002.00--1.00---------------------------------1.00--------------------------------------------
........................................................................................................................................................................................................GCCGAGGGCAACGACG. 162.000.00-----1.00----------------1.00----------------------------------------------------------
............................................................................................................................TGGATGGAGACCCGCTTA........................................................................... 181.000.00-------------------1.00-------------------------------------------------------------
.......................................................................GGATGCGGTGAGGGCTGCTGTGCTCA........................................................................................................................ 2611.001.00------------1.00--------------------------------------------------------------------
.................................................................................................................................................CCCTCGGACCTGCCTT........................................................ 1611.001.00--------------1.00------------------------------------------------------------------
.............................................................................................................................................................CCTTGCGCAGGCTTTA............................................ 161.000.00---------1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................GCCGAGGGCAACGA... 1411.001.00---------------------1.00-----------------------------------------------------------
.................TCAACACTACCCCTGAAGCAAGAGGA.............................................................................................................................................................................. 2611.001.00------------------------------------1.00--------------------------------------------
..............................................................................................................GGACTGAGCCAGGCTGTGG........................................................................................ 191.000.00--------------------------------------------1.00------------------------------------
............................................................................................................................TGGATGGAGACCCGCTTC........................................................................... 181.000.00-------------------1.00-------------------------------------------------------------
................................................................................GAGGGCTGCTGTGCTC......................................................................................................................... 1640.250.25----------0.25----------------------------------------------------------------------