ID: uc007uqm.13
GENE: Lcp1(13)
chr14:75626574-75626823+


(1)
AGO.mut 		(1)
AGO2.ip 		(11)
B-CELL 		(5)
BRAIN 		(1)
CELL-LINE 		(1)
DGCR8.mut 		(2)
HEART 		(4)
LIVER 		(1)
LUNG 		(4)
LYMPH 		(14)
OTHER 		(9)
SPLEEN 		(2)
TESTES 		(1)
THYMUS

Sense strand
CTGGGAGAAAGAGCATCTATTGTGACCCAGCCTACCTGTACCCTCATGTGTCTCCTGCTAGCTGTGCTTTTCTGACATTTTTGGTCTCTTCTTCTCTATGTCTATTCTATAGGTAAGAAGAAAGGCCTACCCACTTCCCTTGAGGCAGACAGAAGGAACTCTAGAATAGATTGATAAACCTTCCCTTTGTCTCTACTTAGGACCCAAAGATCAGTACCAGCCTCCCGGTTCTGGATCTCATTGACGCCAT
....................................................((((.((..((((.(((....((.......(((((((((((..(((((.......)))))..)))))))..))))........))....)))))))..)).)))).............................................................................................
..................................................51...............................................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		GSM640576(GSM640576)
small RNA in the liver with paternal low prot. (liver)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
...........................................................................................................................................TTGAGGCAGACAGAAGGAACT..........................................................................................21137.0037.00-8.001.002.00-3.00-2.00-2.00-1.004.003.00-1.003.00--1.001.00--1.00--------1.00-----1.00-1.00---1.00---------
...........................................................................................................................................TTGAGGCAGACAGAAGGAA............................................................................................19126.0026.00--5.007.00--5.00-2.001.00-----------2.002.00---1.00---------------------1.00-----
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTC.........................................................................................22117.0017.00-3.00---4.00-1.00-1.00-1.00--2.00--2.001.001.00-----1.00----------------------------
.................................................................................................................................................CAGACAGAAGGAACTAAA.......................................................................................1816.000.0016.00-----------------------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGA.............................................................................................1817.007.00--3.001.00--1.00-1.00-----------------1.00---------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTT.........................................................................................2214.0037.00-----------------------1.00-1.00---------------1.00-1.00----------
...........................................................................................................................................TTGAGGCAGACAGAAGGAAC...........................................................................................2014.004.00-2.00-------1.00---------1.00----------------------------------
....................................................................................................................................................................................................................................TTCTGGATCTCATTGACGCCA.2113.003.00----3.00-------------------------------------------------
..........................................................................................................................................CTTGAGGCAGACAGAAGGA.............................................................................................1912.002.00--------2.00---------------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTA.........................................................................................2212.0037.00--1.00-------------------------------1.00-------------------
..........................................................................................................................................CTTGAGGCAGACAGAAGGAACTC.........................................................................................2312.002.00-----------1.00---------------------------------1.00--------
..........................................................................................................................................CTTGAGGCAGACAGAAGGAACT..........................................................................................2212.002.00-1.00------------1.00---------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTAA........................................................................................2311.0037.00--1.00---------------------------------------------------
..........................................................................................................................................CTTGAGGCAGACAGAAGGAA............................................................................................2011.001.00--1.00---------------------------------------------------
...............................................................................................................................................................................................................................CCCGGTTCTGGATCTCATTGACGCC..2511.001.00---1.00--------------------------------------------------
..................................................................................................................................................................................................................................GGTTCTGGATCTCATTGACGCC..2211.001.00----------1.00-------------------------------------------
..........................................................................................................................................CTTGAGGCAGACAGAAGGAACTT.........................................................................................2311.002.00------------------1.00-----------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACAAT........................................................................................2311.004.00-----------------------------------1.00------------------
.........................................................................................................................................................................................................................CAGCCTCCCGGTTCTGGATCTCATTGA......2711.001.00-------------------------------------1.00----------------
.................................................................................................................................................CAGACAGAAGGAACTCTAGACT...................................................................................221.000.00---------------------------------------1.00--------------
..........................................................................................................................................CTTGAGGCAGACAGAAGGAACTAAA.......................................................................................2511.002.00--1.00---------------------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTCAG.......................................................................................2411.0017.00------------------1.00-----------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTCT........................................................................................2311.001.00-----------------1.00------------------------------------
.................................................................................................................................................CAGACAGAAGGAACTATA.......................................................................................181.000.001.00-----------------------------------------------------
.....................................................................................................................................................................................................................................TCTGGATCTCATTGACGCCA.2011.001.00----1.00-------------------------------------------------
....................................................................................................................................................ACAGAAGGAACTCTAGACA...................................................................................191.000.00------------------------------------1.00-----------------
....................................................TCCTGCTAGCTGTGCTTTTCT.................................................................................................................................................................................2111.001.00-----------------------------1.00------------------------
..............................................................................................................................................AGGCAGACAGAAGGAACTCTAGAAT...................................................................................2511.001.00--------------------1.00---------------------------------
............................................................................................................................................TGAGGCAGACAGAAGGAAC...........................................................................................1911.001.00----------------------------------------------1.00-------
............................................................................................................................................TGAGGCAGACAGAAGGAACTC.........................................................................................2111.001.00-----1.00------------------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTCCT.......................................................................................2411.0017.00---1.00--------------------------------------------------
..............................................................................................................................................................................TAAACCTTCCCTTTGTCTCTACTT....................................................2411.001.00------------------------------------------1.00-----------
............................................................................................................................................................................................................CAAAGATCAGTACCAGCCTCCAAAC.....................251.000.00----1.00-------------------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACA..........................................................................................2111.004.00---------------1.00--------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTCA........................................................................................2311.0017.00-----------1.00------------------------------------------
........................................................................................................................................................................................................GACCCAAAGATCAGTACCAGCCTA..........................241.000.00------------------------1.00-----------------------------
.................................................................................................................................................................................................................................CGGTTCTGGATCTCATTGACGC...2211.001.00----1.00-------------------------------------------------
..................................................................................................................................................AGACAGAAGGAACTCAGC......................................................................................181.000.00----------------------------1.00-------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTCAT.......................................................................................2411.0017.00---1.00--------------------------------------------------
................................................................................................................................................................................................................................CCGGTTCTGGATCTCATTGACGCCT.251.000.00-------1.00----------------------------------------------
..........................................................................................................................................................................................................CCCAAAGATCAGTACCAGCCTCA.........................231.000.00----1.00-------------------------------------------------
..........................................................................................................................................CTTGAGGCAGACAGAAGGAACTTT........................................................................................2411.002.00-------1.00----------------------------------------------
............................................................................................................................................TGAGGCAGACAGAAGGAACTCA........................................................................................2211.001.00-------------------------------1.00----------------------
...........................................................................................................................................TTGAGGCAGACAGAAGGAACTCAA.......................................................................................2411.0017.00--------------------------------------------------1.00---
...................................................................................................................................................................................CTTCCCTTTGTCTCTACTTAGAA................................................231.000.00------------------------------1.00-----------------------
.............................................................................................................................................GAGGCAGACAGAAGGAACTCTAG......................................................................................2311.001.00----------1.00-------------------------------------------
.........................................................................................................................................................................................................................CAGCCTCCCGGTTCTGGA...............1811.001.00---------------------------1.00--------------------------
......................................................................................................................................................................................................AGGACCCAAAGATCAGTACC................................2021.001.00---------------------------0.50-------------------------0.50
........................................................................................................................................................AAGGAACTCTAGAATAGATTGATAAACCTTC...................................................................3111.001.00-----------------------------------------------1.00------
...............................................................................................................................................................................................TCTACTTAGGACCCAAAGATCAGT...................................2411.001.00-1.00----------------------------------------------------
..........................................................................................................................................................................................................CCCAAAGATCAGTACCAGCCTCCCGGT.....................2711.001.00----------1.00-------------------------------------------
..........................................................................................................................................................................................................................AGCCTCCCGGTTCTGGCTC.............191.000.00-------1.00----------------------------------------------
...........................................................................................................................................TTGAGGCAGACAGAAGTA.............................................................................................181.000.00---------------1.00--------------------------------------
................................................................................................................................................................................................CTACTTAGGACCCAAAGATCAGTACCAGC.............................2911.001.00----------1.00-------------------------------------------
..........................................................................................................................................CTTGAGGCAGACAGAAGGAACAA.........................................................................................231.000.00-1.00----------------------------------------------------
..........................................................................................................................................................................................................CCCAAAGATCAGTACCAGCCT...........................2120.500.50----------------------------------------------------0.50-
...........................................................................................................................................................................................................CCAAAGATCAGTACCAGCCT...........................2020.500.50---------------------------------------------------0.50--

Antisense strand
CTGGGAGAAAGAGCATCTATTGTGACCCAGCCTACCTGTACCCTCATGTGTCTCCTGCTAGCTGTGCTTTTCTGACATTTTTGGTCTCTTCTTCTCTATGTCTATTCTATAGGTAAGAAGAAAGGCCTACCCACTTCCCTTGAGGCAGACAGAAGGAACTCTAGAATAGATTGATAAACCTTCCCTTTGTCTCTACTTAGGACCCAAAGATCAGTACCAGCCTCCCGGTTCTGGATCTCATTGACGCCAT
....................................................((((.((..((((.(((....((.......(((((((((((..(((((.......)))))..)))))))..))))........))....)))))))..)).)))).............................................................................................
..................................................51...............................................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		GSM640576(GSM640576)
small RNA in the liver with paternal low prot. (liver)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
...........................................................................................................................................................................................................CCAAAGATCAGTACCAGTTAA.......................... 211.000.00------------------------1.00-----------------------------
...........................................................................................................................................................................................................CCAAAGATCAGTACCAATA............................ 191.000.00-------------------------------------------------1.00----
..........GAGCATCTATTGTGAGGA.............................................................................................................................................................................................................................. 181.000.00---------------------------------1.00--------------------
..................................................................................................................................................................................................................TCAGTACCAGCCTCCCGGTTCAA................. 231.000.00----1.00-------------------------------------------------
..........................................................................................................................................................................................................CCCAAAGATCAGTACCAGCCT........................... 2120.500.50----0.50-------------------------------------------------