ID: uc007mtc.10
GENE: (11)
chr11:120399056-120399275+


(1)
AGO.mut 		(7)
BRAIN 		(1)
CELL-LINE 		(2)
ESC 		(2)
KIDNEY 		(15)
LIVER 		(2)
OTHER 		(2)
OTHER.mut 		(3)
TOTAL-RNA

Sense strand
GTGGCCAAGCTGCGTGCCCATCAGATGCACTATGCTGACTATAAGTTCCGGTGGGTAAGGGCGAGGGCCTGGGCCCAGACTGGAGAGGGGCAGGGTTGGGGGTCAGTGCCTTTGTGGGGGAAAGCCCAGAAGACCCGGAAGGTAAGGGTCCTCAAGCTCTGCCCCTGCAGGCTGGCCAGGTCCACGCTGACCCTCATCCCTCTGCTGGGGGTCCACGAGG
................................................................................................................((..((((..(((...((.(((((.........))))).))..)))...))))..))...................................................
..........................................................................................................107............................................................170................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT1()
Liver Data. (liver)		mjLiverWT3()
Liver Data. (liver)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		GSM416732(GSM416732)
MEF. (cell line)
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAG..................................................22142.0042.0019.0013.00--5.001.00--1.00---2.00----------------1.00--
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGT.................................................23139.0042.0012.0010.006.001.002.001.002.001.00---1.00---------1.001.00----1.00----
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGA.................................................23116.0042.005.008.00--2.00-----1.00---------------------
...............................................................................................................TTGTGGGGGAAAGCCCAGAAGACC.....................................................................................2415.005.00---5.00----------------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTA................................................2415.0042.00-3.00---1.001.00-------------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGAA................................................2414.0042.004.00-------------------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGAT................................................2413.0042.00---3.00----------------------------
......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGTT................................................223.000.00--2.00-----------1.00-----------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAAT.................................................232.000.00------------------------1.00---1.00---
...................................................................................................................................................GTCCTCAAGCTCTGCCCCTGCA...................................................2212.002.00-------------2.00------------------
......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGTA................................................222.000.00--2.00-----------------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAT..................................................222.000.00--------1.00--------------1.00--------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTAT...............................................2512.0042.00------1.00------------------1.00------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTTT...............................................2511.0042.00-----------1.00--------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCCGC.................................................2311.001.001.00-------------------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGC....................................................2011.001.00-----1.00--------------------------
...............................................................................................................TTGTGGGGGAAAGCCCAGAAGACCC....................................................................................2511.001.00-------1.00------------------------
........................................................................GCCCAGACTGGAGAGACGT.................................................................................................................................191.000.00------------------1.00-------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCGGCT...................................................211.000.00----------1.00---------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTT................................................2411.0042.00------------------------------1.00-
................................................................................TGGAGAGGGGCAGGGGGGA.........................................................................................................................191.000.00--------------1.00-----------------
...........................................................................CAGACTGGAGAGGGGGCCC..............................................................................................................................191.000.00-------------------1.00------------
......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGT.................................................211.000.00-1.00------------------------------
..............................................................................................................TTTGTGGGGGAAAGCCCAGAAGA.......................................................................................2311.001.00----------1.00---------------------
......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGGT................................................221.000.00--1.00-----------------------------
.....................................................................................AGGGGCAGGGTTGGGGGCG....................................................................................................................191.000.00--------------------1.00-----------
..................................................GTGGGTAAGGGCGAGGGCCTGGGCCCA...............................................................................................................................................2711.001.00-------1.00------------------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAAAA................................................241.000.00--------1.00-----------------------
....................................GACTATAAGTTCCGGC........................................................................................................................................................................161.000.00---------------1.00----------------
....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGC.................................................2311.0042.00--1.00-----------------------------
.........................................................................CCCAGACTGGAGAGGGG..................................................................................................................................1730.330.33-------------------------------0.33

Antisense strand
GTGGCCAAGCTGCGTGCCCATCAGATGCACTATGCTGACTATAAGTTCCGGTGGGTAAGGGCGAGGGCCTGGGCCCAGACTGGAGAGGGGCAGGGTTGGGGGTCAGTGCCTTTGTGGGGGAAAGCCCAGAAGACCCGGAAGGTAAGGGTCCTCAAGCTCTGCCCCTGCAGGCTGGCCAGGTCCACGCTGACCCTCATCCCTCTGCTGGGGGTCCACGAGG
................................................................................................................((..((((..(((...((.(((((.........))))).))..)))...))))..))...................................................
..........................................................................................................107............................................................170................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT1()
Liver Data. (liver)		mjLiverWT3()
Liver Data. (liver)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		GSM416732(GSM416732)
MEF. (cell line)
........................................................................................................................................................CAAGCTCTGCCCCTGGTG.................................................. 182.000.00---------2.00----------------------
.......................................................................................................................................................TCAAGCTCTGCCCCTCATC.................................................. 191.000.00--------------------------1.00-----
..GGCCAAGCTGCGTGCCCACACT.................................................................................................................................................................................................... 221.000.00---------1.00----------------------
..................................................................................................................................................................................GGTCCACGCTGACC............................ 1421.001.00-----------------1.00--------------
.......................................................................................................................................................................CAGGCTGGCCAGGTCCACGGCA............................... 221.000.00----------------1.00---------------