ID: uc007mim.2
GENE: 2310067B10Rik(3)
chr11:115646824-115647178+


(2)
AGO1.ip 		(3)
AGO2.ip 		(2)
AGO3.ip 		(5)
B-CELL 		(16)
BRAIN 		(10)
CELL-LINE 		(2)
DCR.mut 		(3)
DGCR8.mut 		(9)
EMBRYO 		(5)
ESC 		(1)
FIBROBLAST 		(1)
KIDNEY 		(4)
LIVER 		(1)
LUNG 		(2)
LYMPH 		(11)
OTHER 		(1)
OTHER.ip 		(5)
OTHER.mut 		(1)
OVARY 		(3)
PIWI.ip 		(2)
PIWI.mut 		(7)
SKIN 		(6)
SPLEEN 		(23)
TESTES 		(1)
THYMUS 		(3)
TOTAL-RNA

Sense strand
CTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAAGTCTTACATGGAAGGTGAAGCTTCCTCCTCAGGGGTGGCCAGAGCTCATCTGGGTAGGCAGAGAAGCTGGGAGCCCTGTCTCAGGACCTGTGCCTGTCCCCTGAATAGGGGGCCTCAACTGAGATTTCATGCAGTCAGAAGTTCCAGTTTGCTTGGCGAGATGTTGCACTCCACTCGCCGGAGGTGGCCATAAGAAATAGGCAGGCCTGGGGCATGAGAGGTAGATGGGAGCTGGCTGGGATACTCACTGCCTGCCTGCCCTACTCTAGGAGGCATGGAGAAGCAGCTTCCTGCACCTCAGTAACCGCTGCTCCTGTTT
...............................................................................................................................................................................................................................................((..(((((((....((((((.((((..((.....))...))))))))))...)))))))..))....................................................
..............................................................................................................................................................................................................................................239...............................................................305................................................
SizePerfect hitTotal NormPerfect NormGSM475280(GSM475280)
Mili-IP. (mili testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		mjTestesWT4()
Testes Data. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		GSM640576(GSM640576)
small RNA in the liver with paternal low prot. (liver)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR028731(GSM400968)
Mili-wt-associated. (testes)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR059773(GSM562835)
CD4_Dicer. (spleen)		SRR206942(GSM723283)
other. (brain)		SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR553586(SRX182792)
source: Testis. (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR060845(GSM561991)
total RNA. (brain)		GSM314558(GSM314558)
ESC wild type (454). (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR037931(GSM510469)
293GFP. (cell line)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR037924(GSM510462)
e9p5_rep2. (embryo)
....................AAAGAACGGAAGAAAAGTCTT..........................................................................................................................................................................................................................................................................................................................21111.0011.00--5.00---4.00-------2.00-------------------------------------------------------------------------------------------
.TGTATTGGAGAAACACCTCAAAGAACGG......................................................................................................................................................................................................................................................................................................................................2818.008.001.00------1.00-2.00------2.00--------------1.00---------------------------1.00----------------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGGG..........................................................................................2217.007.00----4.00-----------------1.00----------1.00------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................CACTGCCTGCCTGCCCTACTCT....................................................2217.007.00----1.001.001.00--------2.00----1.00--------------------------------------------------------------1.00----------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGATGG...........................................................................................2216.006.00-------------2.00-----------1.00---------------------------------------1.00-------1.00-------1.00------------------------
.........................ACGGAAGAAAAGTCTTACATGGAAGGAGG.............................................................................................................................................................................................................................................................................................................296.000.00--------6.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTACT......................................................2116.006.00-----2.00--------------------2.001.00----------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGG...........................................................................................2116.006.00----1.00---------------------------1.00--1.00-------------------1.00--------1.00----------1.00------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTACTCT....................................................2316.006.00-2.00---2.00------------------------1.00---------------------------------------1.00-----------------------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGATGGG..........................................................................................2314.004.00----1.001.00----------------1.00----------------------------------------------1.00------------------------------------
.................................................................................................................................................................................................................................................CCTGGGGCATGAGAGGTAGATGG...........................................................................................2314.004.00-1.00-------------------------------1.00------------------------1.00-----------------------1.00-----------------------
.....TTGGAGAAACACCTCAAAGAACGGAAGA..................................................................................................................................................................................................................................................................................................................................2814.004.001.00------1.00-1.00------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGGGA.........................................................................................2314.004.00----1.00---------------1.00------------------------------------1.00--------------------------1.00---------------------
.TGTATTGGAGAAACACCTCAAAGAACGGT.....................................................................................................................................................................................................................................................................................................................................2913.008.00---3.00------------------------------------------------------------------------------------------------------
......TGGAGAAACACCTCAAAGAACGGAAGA..................................................................................................................................................................................................................................................................................................................................2713.003.00-------1.00---------------------------1.00-------------------------------------------1.00--------------------------
..................TCAAAGAACGGAAGAAAAG..............................................................................................................................................................................................................................................................................................................................1913.003.00------1.00----1.00--1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAG...............................................................................................1812.002.00-------------------2.00--------------------------------------------------------------------------------------
....................AAAGAACGGAAGAAAAGTCTTAC........................................................................................................................................................................................................................................................................................................................2312.002.00-----------2.00----------------------------------------------------------------------------------------------
.TGTATTGGAGAAACACCTCAAAGAACGGAA....................................................................................................................................................................................................................................................................................................................................3012.002.00---1.00-----1.00------------------------------------------------------------------------------------------------
..GTATTGGAGAAACACCTCAAAGAACGG......................................................................................................................................................................................................................................................................................................................................2712.002.00---1.00---1.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGATG............................................................................................2112.002.00---------------------------------------------------------------1.00--------------------------1.00---------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGATGGGA.........................................................................................2412.002.00-------------------------1.00----------------------------------------------1.00---------------------------------
..............CACCTCAAAGAACGGAAGAAAAG..............................................................................................................................................................................................................................................................................................................................2312.002.00-----------------1.00-------------------------1.00--------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGGAGAAGCAGCTTCCTGC.........................1922.002.00---------------------------------------0.50---------------------------------------------------0.50---0.500.50---------
...............ACCTCAAAGAACGGAAGAAAAGT.............................................................................................................................................................................................................................................................................................................................2312.002.00-----------------2.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTACTC.....................................................2212.002.00-----1.00--------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................CACTGCCTGCCTGCCCTACT......................................................2012.002.00-1.00----------------1.00---------------------------------------------------------------------------------------
........................AACGGAAGAAAAGTCTTACATGGAAGG................................................................................................................................................................................................................................................................................................................2712.002.001.00------1.00--------------------------------------------------------------------------------------------------
...................CAAAGAACGGAAGAAAAGTCT...........................................................................................................................................................................................................................................................................................................................2112.002.00-----------1.00--1.00-------------------------------------------------------------------------------------------
.....TTGGAGAAACACCTCAAAGAACGGAAG...................................................................................................................................................................................................................................................................................................................................2712.002.00----------------1.00--------------1.00--------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTACTCA....................................................2312.002.00-1.00-------------1.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................CACTGCCTGCCTGCCCTACTC.....................................................2112.002.00---------------1.00--------------1.00---------------------------------------------------------------------------
.....TTGGAGAAACACCTCAAAGAACGGAAGAA.................................................................................................................................................................................................................................................................................................................................2912.002.00------------------------1.00-------------------------------------------------------------1.00-------------------
........................AACGGAAGAAAAGTCTTACATGGAAGCC...............................................................................................................................................................................................................................................................................................................2812.001.00---------2.00------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTACA......................................................2112.001.00-2.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGGGT.........................................................................................2312.007.00--1.00------------------1.00------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGGA..........................................................................................2212.006.00-------------1.00--------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CCTGGGGCATGAGAGGTAGAT.............................................................................................2112.002.00-------------1.00-------1.00------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTACTCTAA..................................................2511.001.00----------------------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTACTCTA...................................................2411.001.00------------------------------------------------1.00---------------------------------------------------------
........................AACGGAAGAAAAGTCTTACATGGAAG.................................................................................................................................................................................................................................................................................................................2611.001.00-------------------------------------------------1.00--------------------------------------------------------
......TGGAGAAACACCTCAAAGAACGGAAGAAAAGT.............................................................................................................................................................................................................................................................................................................................3211.001.001.00---------------------------------------------------------------------------------------------------------
..............................AGAAAAGTCTTACATGGAAG.................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------------1.00----------------------------------------------------------------------------
.TGTATTGGAGAAACACCTCAAAGAACGGAAG...................................................................................................................................................................................................................................................................................................................................3111.001.00----------------------------------------------------------------------------1.00-----------------------------
...................CAAAGAACGGAAGAAAAGTCTTACATG.....................................................................................................................................................................................................................................................................................................................2711.001.001.00---------------------------------------------------------------------------------------------------------
...................................................................................................AAGCTGGGAGCCCTGCGA..............................................................................................................................................................................................................................................181.000.00-----------------------------------------------1.00----------------------------------------------------------
........................AACGGAAGAAAAGTCTTACATGGAAGGA...............................................................................................................................................................................................................................................................................................................2811.002.00---1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................AGGCAGGCCTGGGGCTGCG......................................................................................................191.000.00-----------------------------------------------------------------------------------------1.00----------------
................................................................................................................................................................................................................................................................................TGGGATACTCACTGCAGAA................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------------
.TGTATTGGAGAAACACCTCAAAGAACGA......................................................................................................................................................................................................................................................................................................................................281.000.001.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CCTGGGGCATGAGAGGTAGCTGG...........................................................................................2311.001.00------------------------------------------------------------------1.00---------------------------------------
.........................ACGGAAGAAAAGTCTTACATGGAAGGAGGC............................................................................................................................................................................................................................................................................................................301.000.00------------------------1.00---------------------------------------------------------------------------------
.....TTGGAGAAACACCTCAAAGAACGGAA....................................................................................................................................................................................................................................................................................................................................2611.001.001.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGA...........................................................................................211.000.00--------------------------------------------1.00-------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTAC.......................................................2011.001.00-1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................GAGGCATGGAGAAGCGGG................................181.000.00----------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................TGGGAGCTGGCTGGGCAA............................................................................181.000.00----------------------------------------------1.00-----------------------------------------------------------
......TGGAGAAACACCTCAAAGAACGGAAGAAT................................................................................................................................................................................................................................................................................................................................291.000.001.00---------------------------------------------------------------------------------------------------------
..........GAAACACCTCAAAGAACGGAAGA..................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................CATGCAGTCAGAAGTTCCAGTTT.........................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------1.00----------------------------
.......................................................................................................................................................................................................................................................................................................................................TGCACCTCAGTAACCGCTGCTCCTGTT.2711.001.00-----------------------------------------------------1.00----------------------------------------------------
........................AACGGAAGAAAAGTCTT..........................................................................................................................................................................................................................................................................................................................1711.001.00------------------1.00---------------------------------------------------------------------------------------
...................................................................................................................................................................CATGCAGTCAGAAGTTTT..............................................................................................................................................................................181.000.00------------------------------------------1.00---------------------------------------------------------------
......................AGAACGGAAGAAAAGTCTT..........................................................................................................................................................................................................................................................................................................................1911.001.00------1.00---------------------------------------------------------------------------------------------------
........................AACGGAAGAAAAGTCTTACATGGAAGGAGGC............................................................................................................................................................................................................................................................................................................3111.002.00--------------------------------------------------------------1.00-------------------------------------------
..................TCAAAGAACGGAAGAAAAGTCTT..........................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------1.00-------------------------------
.....TTGGAGAAACACCTCAAAGAACGGAAGT..................................................................................................................................................................................................................................................................................................................................2811.002.00---1.00------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGATGGT..........................................................................................2311.006.00---------------------------------------------------------------------------------------1.00------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGATGGGTT........................................................................................2511.004.00------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGTC.............................................................................................2011.002.00-------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................TCTCAGGACCTGTGCCATC..............................................................................................................................................................................................................................191.000.00----------1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CCTGGGGCATGAGAGGTAG...............................................................................................1911.001.00----------------------------1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TCACTGCCTGCCTGCCCTA........................................................1911.001.00---------------------1.00------------------------------------------------------------------------------------
....................AAAGAACGGAAGAAAAG..............................................................................................................................................................................................................................................................................................................................1731.001.00-----------0.67-------------------------------------------------------------------------------------0.33--------
....................................................................................................................................................................................................................................................GGGGCATGAGAGGTAGATGGG..........................................................................................2111.001.00--------------------------------1.00-------------------------------------------------------------------------
.TGTATTGGAGAAACAGC.................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------------------1.00--------------------------------------
.....TTGGAGAAACACCTCAAAGAACGGCAG...................................................................................................................................................................................................................................................................................................................................271.000.00-------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGGT..........................................................................................2211.006.00------------------------------------------------------------1.00---------------------------------------------
.....TTGGAGAAACACCTCAAAGAACGGGAG...................................................................................................................................................................................................................................................................................................................................271.000.00--------------------------------------------------------------------------------1.00-------------------------
..................TCAAAGAACGGAAGAAAAGTCTTACATGG....................................................................................................................................................................................................................................................................................................................2911.001.00---1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CCTGGGGCATGAGAGGTAGATGT...........................................................................................231.000.00------------------------------------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGGAGAAGCAGCTTCCTGCACCTC....................2411.001.00--1.00-------------------------------------------------------------------------------------------------------
.................CTCAAAGAACGGAAGAAAAGTC............................................................................................................................................................................................................................................................................................................................2211.001.00---------------------------------------------------1.00------------------------------------------------------
.TGTATTGGAGAAACACCTCAAAGAACGGA.....................................................................................................................................................................................................................................................................................................................................2911.001.00-------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TGGGGCATGAGAGGTAGATGT...........................................................................................211.000.00------------------------------------------------------------------------------1.00---------------------------
..................TCAAAGAACGGAAGAAAAGTCTTAC........................................................................................................................................................................................................................................................................................................................2511.001.001.00---------------------------------------------------------------------------------------------------------
......TGGAGAAACACCTCAAAGAACGGAATA..................................................................................................................................................................................................................................................................................................................................271.000.00---------------------------1.00------------------------------------------------------------------------------
..................TCAAAGAACGGAAGAAAAGTCTTACAT......................................................................................................................................................................................................................................................................................................................2711.001.00-----------------------------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................................................................................CTGGGGCATGAGAGGTAGATGGGAT........................................................................................2511.002.00----------------------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................TGCAGTCAGAAGTTC...............................................................................................................................................................................1580.250.25---------------------------------------------0.120.12-----------------------------------------------------------
..............................................................................................................................................................................................................................................AGGCCTGGGGCATGA......................................................................................................1590.110.11-----------------------------------------------0.11----------------------------------------------------------

Antisense strand
CTGTATTGGAGAAACACCTCAAAGAACGGAAGAAAAGTCTTACATGGAAGGTGAAGCTTCCTCCTCAGGGGTGGCCAGAGCTCATCTGGGTAGGCAGAGAAGCTGGGAGCCCTGTCTCAGGACCTGTGCCTGTCCCCTGAATAGGGGGCCTCAACTGAGATTTCATGCAGTCAGAAGTTCCAGTTTGCTTGGCGAGATGTTGCACTCCACTCGCCGGAGGTGGCCATAAGAAATAGGCAGGCCTGGGGCATGAGAGGTAGATGGGAGCTGGCTGGGATACTCACTGCCTGCCTGCCCTACTCTAGGAGGCATGGAGAAGCAGCTTCCTGCACCTCAGTAACCGCTGCTCCTGTTT
...............................................................................................................................................................................................................................................((..(((((((....((((((.((((..((.....))...))))))))))...)))))))..))....................................................
..............................................................................................................................................................................................................................................239...............................................................305................................................
SizePerfect hitTotal NormPerfect NormGSM475280(GSM475280)
Mili-IP. (mili testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		mjTestesWT4()
Testes Data. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		GSM640576(GSM640576)
small RNA in the liver with paternal low prot. (liver)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR028731(GSM400968)
Mili-wt-associated. (testes)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR059773(GSM562835)
CD4_Dicer. (spleen)		SRR206942(GSM723283)
other. (brain)		SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR553586(SRX182792)
source: Testis. (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR060845(GSM561991)
total RNA. (brain)		GSM314558(GSM314558)
ESC wild type (454). (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR037931(GSM510469)
293GFP. (cell line)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR037924(GSM510462)
e9p5_rep2. (embryo)
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCACTGTC................................................................... 196.670.00-------------------------------------0.67---0.33-0.330.33----------------------------------------1.00-----0.330.670.670.33---0.330.330.330.330.33--0.33
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCAC....................................................................... 1535.675.67-----------------------2.33------------1.33-1.33-0.33---------------------------------------------------------------0.33-
..................................................................................................................................................................................................AGATGTTGCACTCCAAT................................................................................................................................................ 172.000.00----------------------------------2.00-----------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCATGT............................................................................................................................................................................................................................................................................................. 181.000.00------------1.00---------------------------------------------------------------------------------------------
....................AAAGAACGGAAGAAATGTT............................................................................................................................................................................................................................................................................................................................ 191.000.00---------------------------------------1.00------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCAGGCG............................................................................................................................................................................................................................................................................................ 191.000.00------------1.00---------------------------------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCAGAT............................................................................................................................................................................................................................................................................................. 181.000.00--------------------------------------------------1.00-------------------------------------------------------
....................................................GAAGCTTCCTCCTCATGTC............................................................................................................................................................................................................................................................................................ 191.000.00------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................CTTCCTGCACCTCAGACA............... 181.000.00--------------------------------------------------------1.00-------------------------------------------------
....................................................GAAGCTTCCTCCTCATAC............................................................................................................................................................................................................................................................................................. 181.000.00----------1.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................GGAGCTGGCTGGGATACCA......................................................................... 191.000.00----------------------------------------------------------------------------------------1.00-----------------
..............................................................................................................................................................................................GGCGAGATGTTGCACTTG................................................................................................................................................... 181.000.00-----------------------------1.00----------------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCAGATA............................................................................................................................................................................................................................................................................................ 191.000.00------------1.00---------------------------------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCATAT............................................................................................................................................................................................................................................................................................. 181.000.00----------1.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................CTGGCTGGGATACTCACTC..................................................................... 191.000.00-----------------------------------------1.00----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................GGGATACTCACTGCCCCC................................................................ 181.000.00-------------------------------------1.00--------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCATGCC............................................................................................................................................................................................................................................................................................ 191.000.00----------1.00-----------------------------------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCATCTT............................................................................................................................................................................................................................................................................................ 191.000.00----------1.00-----------------------------------------------------------------------------------------------
....................................................GAAGCTTCCTCCTCATATA............................................................................................................................................................................................................................................................................................ 191.000.00---------------------------------------------1.00------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCACT...................................................................... 1620.500.50------------------------------------0.50---------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCACTGTT................................................................... 190.330.00-------------------------------------------------------------------------------------------------------0.33--
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCACTGCC................................................................... 190.330.00----------------------------------------------------------------------------------------------0.33-----------
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCACT...................................................................... 160.330.00--------------------------------------0.33-------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCACTG..................................................................... 170.330.00-----------------------0.33----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GGCTGGGATACTCACTAT.................................................................... 180.330.00------------------------------------------0.33---------------------------------------------------------------