ID: uc007ltw.0
GENE: Fr1(1)
chr11:103046603-103046984+


(2)
AGO1.ip 		(11)
AGO2.ip 		(1)
AGO3.ip 		(12)
B-CELL 		(22)
BRAIN 		(2)
CELL-LINE 		(1)
DCR.mut 		(1)
DGCR8.mut 		(4)
EMBRYO 		(1)
ESC 		(1)
KIDNEY 		(3)
LIVER 		(1)
LUNG 		(5)
LYMPH 		(11)
OTHER 		(4)
OTHER.mut 		(4)
SKIN 		(8)
SPLEEN 		(5)
TESTES 		(3)
THYMUS

Sense strand
GTTTTGAGTTCCAGTCCTCTGCCCTTACTTCCCAAATACTGGAATTACAGGCATGTGCCATTGTGCCTGGCTCACAGCAGCCCTTTTAAAAAACCAAGTAATTTTAAGGGCCTTTGCTTCCTTGGCCCACCCTCACTCCCTCCCCCAGCATGCCTGCCCCTGGGGAAGGCAGCCTTCAGCTGGCCAGCTGAGTCAGGTAGATAGGAGACAGCAGCTTAGAGTTCCTAGATCGATCCCCCTCACTCCAAAAGGCATCTTACTGGTATGAGGAGCAGGAAGCTGGGGGTTGTGGGGAGGGTGTCTGACCCTGCTGCCTCTTCCTCATCCACCAGGCTGACCCCTGCCCACAGCAGGAAGGCGCTGAGGAATTCCCGAATCGTCA
...................................................................................................................................................................................................................................................................((((((((((((.(((....)))(((((.((((((.((....))..)))))).))))).)))))))..)))))..................................................
...............................................................................................................................................................................................................................................................256.........................................................................332................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR206942(GSM723283)
other. (brain)		mjLiverWT1()
Liver Data. (liver)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR038741(GSM527276)
small RNA-Seq. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR037902(GSM510438)
testes_rep3. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
.......................................................................................................................................................................................................................................................................................................................TGCCTCTTCCTCATCCACCAGT.................................................2211.000.00----------1.00--2.00---------------1.00--1.00---1.00--------1.00---------1.00-----1.00----1.00------1.00--------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCT.....................................................................................................21110.0010.002.002.001.00---1.00-----1.00---1.00-1.001.00--------------------------------------------------------------
..................................................................................................................................................................................................................................................................ACTGGTATGAGGAGCAGGAAG.......................................................................................................2119.009.002.00-------1.00-1.00-1.00-----1.00-----------1.00-----------------------1.00----------------1.00----------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGG...................................................................................................2019.009.001.001.00----1.00----2.001.00-2.00--1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCT.....................................................................................................1817.007.001.001.00-2.00--1.00-------------1.00---------------------------------------1.00---------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGG..................................................................................................2116.006.001.00-----------1.00-------------2.00------1.00-1.00----------------------------------------------
.................................................................................................................................................................................................................................................................TACTGGTATGAGGAGCAGGAAGC......................................................................................................2316.006.00-1.00--5.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGT...................................................................................................2315.001.00-------1.00---------2.00---------1.00-----------------------------------1.00------------------
..................................................................................................................................................................................................................................................................ACTGGTATGAGGAGCAGGAAGC......................................................................................................2215.005.001.001.00--1.00---2.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................TACTGGTATGAGGAGCAGGAAG.......................................................................................................2215.005.00----1.00-----1.00------------------------1.00----------------1.00-------------------------1.00---
.......................................................................................................................................................................................................................................................................................................................TGCCTCTTCCTCATCCACCAGA.................................................224.000.00-----------------------3.00-----------------------1.00----------------------------------
...................................................................................................................................................................................................................................................................CTGGTATGAGGAGCAGGAAGCT.....................................................................................................2214.004.001.001.001.00--1.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGAA.................................................................................................2214.009.00------1.00------------------1.00-2.00------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGG...................................................................................................2314.004.00----------------------1.00----------1.00----------------------------------------------1.001.00
......................................................................................................................................................................................................................................................................................................................CTGCCTCTTCCTCATCCACCAGT.................................................234.000.00----------1.00--------------2.00------------------1.00-------------------------------------
...................................................................................................................................................................................................................................................................CTGGTATGAGGAGCAGGAAGCTG....................................................................................................2313.003.00--2.001.00------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGA...................................................................................................2312.001.00------------------------------------1.00-----------------------------------1.00---------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGGAA.................................................................................................2512.004.00---------------2.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................GGAAGGCGCTGAGGAATT............1812.002.00---------------------1.00---------------------1.00--------------------------------------
..................................................................................................................................................................................................................................................................ACTGGTATGAGGAGCAGGAA........................................................................................................2012.002.00--------1.00-------1.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................CTGGGGGTTGTGGGGAGGGTG..................................................................................2112.002.00-----1.00------------------1.00---------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGAT.................................................................................................2212.009.00------------------------1.00-------------------------------1.00-------------------------
.................................................................................................................................................................................................................................................................TACTGGTATGAGGAGCAGGAA........................................................................................................2112.002.00-1.00--------------1.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTG....................................................................................................1912.002.00---2.00------------------------------------------------------------------------------
........................................................................................................................................................................................CAGCTGAGTCAGGTAGATAGGA................................................................................................................................................................................2212.002.00----------------------------2.00-----------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGAA..................................................................................................2112.002.00----------------------------------2.00-----------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGAAA...............................................................................................2412.006.00-1.00------------------------1.00-------------------------------------------------------
......................................................................................................................................................................................................................................................................................GCTGGGGGTTGTGGGGAGGGT...................................................................................2111.001.00-----1.00----------------------------------------------------------------------------
.................................AAATACTGGAATTACAGGCATGTGC....................................................................................................................................................................................................................................................................................................................................2511.001.00-------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGTAA.................................................................................................2511.001.00--------------------1.00-------------------------------------------------------------
......................................................................................................................................................................................................................................................................GTATGAGGAGCAGGAAGCTGGGA.................................................................................................231.000.00---1.00------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................AGGAGCAGGAAGCTGGCGC................................................................................................191.000.00---------1.00------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGA...................................................................................................2011.002.00----------------------------------------------------------------------1.00-----------
...........................................................................................................................................................................................................GGAGACAGCAGCTTAGAGTTCCTAGATCG......................................................................................................................................................2911.001.00-------------------------------------------------1.00--------------------------------
........................................................................................................................................................................................................................................................................ATGAGGAGCAGGAAGCTGGGGGAAT.............................................................................................251.000.00------1.00---------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................CTGGGGGTTGTGGGGAGGGTGT.................................................................................2211.001.00---1.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GCAGGAAGGCGCTGAACAC..............191.000.00---------1.00------------------------------------------------------------------------
....................................TACTGGAATTACAGGCATGTGCCATTGT..............................................................................................................................................................................................................................................................................................................................2811.001.00--1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTG....................................................................................................2211.001.00--------------------------------1.00-------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGTAT................................................................................................2311.009.001.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGAATT..............................................................................................2511.006.00------1.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................AGCAGGAAGGCGCTGAGGAATTC...........2311.001.00---------------------1.00------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................GGCGCTGAGGAATTCCCGAATC....2211.001.00-------------------------------------------------------------------1.00--------------
...................................................................................................................................................................................................................................................................CTGGTATGAGGAGCAGGAAGC......................................................................................................2111.001.00----------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGAAA.................................................................................................2211.002.00---1.00------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................ACTGGTATGAGGAGCAGGAAGA......................................................................................................2211.009.00-1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................GCTGGGGGTTGTGGGGAGGGTGT.................................................................................2311.001.00---------------1.00------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGCCTCTTCCTCATCCACCAGTT................................................231.000.00--------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................TGAGTCAGGTAGATAGGAGACAGC..........................................................................................................................................................................2411.001.00-------1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................TACTGGTATGAGGAGCAGTAAG.......................................................................................................221.000.001.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................AGCTGGGGGTTGTGGGTTC......................................................................................191.000.00--------------------------------------------------1.00-------------------------------
........................................................................................................................................................................................................................................................................................TGGGGGTTGTGGGGAGGGTGT.................................................................................2111.001.00-------------------1.00--------------------------------------------------------------
...........................................................ATTGTGCCTGGCTCACAGCAGCCCTTTTAAAAAAT................................................................................................................................................................................................................................................................................................351.000.00-------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGTA..................................................................................................2111.002.00------------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGAA................................................................................................2311.006.00-----1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................ACTGGTATGAGGAGCAGG..........................................................................................................1811.001.00------------------1.00---------------------------------------------------------------
.................................................................................................................................................................................................................................................................TACTGGTATGAGGAGCAGGA.........................................................................................................2011.001.00----------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGA......................................................................................................201.000.00-----------------------------------------1.00----------------------------------------
..................................................................................................TAATTTTAAGGGCCTGAGG.........................................................................................................................................................................................................................................................................191.000.00-------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGGAGGGTGTCTGAAAA..........................................................................181.000.00--------------------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGTA................................................................................................2311.006.001.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................ACTGGTATGAGGAGCAGGAAGT......................................................................................................2211.009.001.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGA.................................................................................................2211.006.00-------------------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GTTGTGGGGAGGGTGTCTGAC............................................................................2111.001.00------------------------------------------------1.00---------------------------------
.............................................................................................................................................................................................................................................................................................GTTGTGGGGAGGGTGTCTGACC...........................................................................2211.001.00---------------------------------------------------------1.00------------------------
........................................................................................................................................................................................................................................................................................TGGGGGTTGTGGGGAGGGTGTCA...............................................................................231.000.00-1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................GGTATGAGGAGCAGGAAGCTGG...................................................................................................2211.001.00--1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGAT..................................................................................................2111.002.001.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTT....................................................................................................2211.0010.00------------1.00---------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGAG..................................................................................................2411.001.00-1.00--------------------------------------------------------------------------------
..................................................................................................TAATTTTAAGGGCCTGGGT.........................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................................................................................................................................................TGCCTCTTCCTCATCCACCAGC.................................................221.000.00----------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................................................................................GTATGAGGAGCAGGAAGCTGA...................................................................................................211.000.00--1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGC......................................................................................................2011.001.001.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................CAGGAAGGCGCTGAGGTTCT............201.000.00---------------------------------------1.00------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGA..................................................................................................2111.009.00-------------------------------1.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................AGGCGCTGAGGAATTTG..........171.000.00--------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GTTGTGGGGAGGGTGGATC..............................................................................191.000.00---------------------------------------------------------------------1.00------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGAG.................................................................................................2211.009.00-----------------------------1.00----------------------------------------------------
...................................................................................................................................................................................................................................................................CTGGTATGAGGAGCAGGAAGCTGGGGTT...............................................................................................281.000.001.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................TGCTGCCTCTTCCTCATCCAC.....................................................2111.001.00--------------------------------------------------------------------------1.00-------
..................................................................................................................................................................................................................................................................ACTGGTATGAGGAGCAGGAAGCTT....................................................................................................241.000.00--------1.00-------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGGG..................................................................................................2411.001.00--1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................GGGGTTGTGGGGAGGGTGTCTGAA............................................................................241.000.00------------------------------------------1.00---------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GCAGGAAGGCGCTGAGGAATTCCCGAA......2711.001.00-----1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................TGCTGCCTCTTCCTCATCCAT.....................................................211.000.00-------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGT.................................................................................................2211.006.00--1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TGGTATGAGGAGCAGGAAGCTGGAAT................................................................................................2611.004.00---1.00------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGCTTAGAGTTCCTAGATC.......................................................................................................................................................1911.001.00-------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................AGGCGCTGAGGAATTCCCGAA......2111.001.00-----------------------------------------------------------------1.00----------------
.............................................................................................................................................................................................................................................................................................GTTGTGGGGAGGGTGTCTGA.............................................................................2011.001.00------------------------1.00---------------------------------------------------------
........................................................................................................................................................................................................................................................................................TGGGGGTTGTGGGGAGGGTGTAA...............................................................................2311.001.00-1.00--------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGCCTCTTCCTCATCCACCGGA.................................................221.000.00----------------------------------------1.00-----------------------------------------
............................................................................................................................................................................................................................................................................................GGTTGTGGGGAGGGTGTCTGAAA...........................................................................231.000.00---------------------------------------------------------------------------1.00------
......................................................................................................................................................................................................................................................................................................................................................................CGCTGAGGAATTCCCGAATCGTC.2311.001.00-------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGAAA................................................................................................2311.009.00-----1.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGGATT..............................................................................................251.000.00--------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGCCTCTTCCTCATCCACCA...................................................2011.001.00-------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................................................................GTATGAGGAGCAGGAAGC......................................................................................................1811.001.001.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................AAGGCGCTGAGGAATTCCCGA.......2111.001.00----------------------------------------------------------------1.00-----------------
.................................................................................................................................................................................................................................................................TACTGGTATGAGGAGCAGGAAGCG.....................................................................................................2411.006.00----1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGT..................................................................................................2111.009.00-------------------------------1.00--------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................GCAGGAAGGCGCTGACACT..............191.000.00---------1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................GGAAGGCGCTGAGGAATTCCAA........221.000.00----------------------1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGTAA................................................................................................2311.009.001.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................TACTGGTATGAGGAGCAGG..........................................................................................................1911.001.00------1.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................GCTGGGGGTTGTGGGTTCG.....................................................................................191.000.00--------------------------------------------------------------------1.00-------------
..............................................................................................................................................................................................................................................................................AGCAGGAAGCTGGGGGTTGTGGG.........................................................................................2311.001.00-----------------------------------------------------------1.00----------------------
......................................................................................................................................................................................................................................................................GTATGAGGAGCAGGAAGCTGGAG.................................................................................................231.000.001.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................GGAAGGCGCTGAGGAATTCCCGA.......2311.001.00---------------------1.00------------------------------------------------------------
.......................................................................................................................................................................................................................................................................TATGAGGAGCAGGAAGCTGGGGGTAT.............................................................................................261.000.00--1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................AGGAAGGCGCTGAGG................1570.290.29----------------------------0.29-----------------------------------------------------
....................................................................................................................................................................................................................................................................................................GGAGGGTGTCTGACC...........................................................................1560.170.17---------0.17------------------------------------------------------------------------

Antisense strand
GTTTTGAGTTCCAGTCCTCTGCCCTTACTTCCCAAATACTGGAATTACAGGCATGTGCCATTGTGCCTGGCTCACAGCAGCCCTTTTAAAAAACCAAGTAATTTTAAGGGCCTTTGCTTCCTTGGCCCACCCTCACTCCCTCCCCCAGCATGCCTGCCCCTGGGGAAGGCAGCCTTCAGCTGGCCAGCTGAGTCAGGTAGATAGGAGACAGCAGCTTAGAGTTCCTAGATCGATCCCCCTCACTCCAAAAGGCATCTTACTGGTATGAGGAGCAGGAAGCTGGGGGTTGTGGGGAGGGTGTCTGACCCTGCTGCCTCTTCCTCATCCACCAGGCTGACCCCTGCCCACAGCAGGAAGGCGCTGAGGAATTCCCGAATCGTCA
...................................................................................................................................................................................................................................................................((((((((((((.(((....)))(((((.((((((.((....))..)))))).))))).)))))))..)))))..................................................
...............................................................................................................................................................................................................................................................256.........................................................................332................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR206942(GSM723283)
other. (brain)		mjLiverWT1()
Liver Data. (liver)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR038741(GSM527276)
small RNA-Seq. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR037902(GSM510438)
testes_rep3. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
...................................................................................................................................................................................................................................................................................................................CTGCTGCCTCTTCCTCAAAG....................................................... 201.000.00-------------------------------------------------------------------------------1.00--
.............................................................................................................................................................................................................................................................................................................................TTCCTCATCCACCAGGCCGTA............................................ 211.000.00-------------------------------------1.00--------------------------------------------
.........................................................................................................................................................................CAGCCTTCAGCTGGCTTCT.................................................................................................................................................................................................. 191.000.00---------1.00------------------------------------------------------------------------
..............................................................................................................................CCACCCTCACTCCCTTAGA............................................................................................................................................................................................................................................. 191.000.00--------------------------------------1.00-------------------------------------------
..................................................................................................................................CCTCACTCCCTCCCCCATC......................................................................................................................................................................................................................................... 191.000.00-----------1.00----------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................TGACCCTGCTGCCTCTCCAT............................................................ 201.000.00---------------------------------------------------1.00------------------------------
.........................................................................................................................................................................CAGCCTTCAGCTGGCATCT.................................................................................................................................................................................................. 191.000.00--------------1.00-------------------------------------------------------------------
.........................................................................................................................................CCCTCCCCCAGCATGCCTGACA............................................................................................................................................................................................................................... 221.000.00-----1.00----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................CTGCTGCCTCTTCCTCTGG........................................................ 191.000.00-----------1.00----------------------------------------------------------------------
..............................................................................................................................................................................................................................................................TCTTACTGGTATGAGCTGA............................................................................................................. 191.000.00-----------------------------------------------------------------------------1.00----
.........................................................................ACAGCAGCCCTTTTAAGGC.................................................................................................................................................................................................................................................................................................. 191.000.00-----------------------------------------------------1.00----------------------------
........TTCCAGTCCTCTGCCCT..................................................................................................................................................................................................................................................................................................................................................................... 1711.001.00---------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................TCTTCCTCATCCACCTAC................................................. 181.000.00----------------------------------------------------------1.00-----------------------
..................................................................................................................................................................................................................................................................................................................CCTGCTGCCTCTTCCTACC......................................................... 191.000.00-----------1.00----------------------------------------------------------------------
.........................TACTTCCCAAATACTGGAAGG................................................................................................................................................................................................................................................................................................................................................ 211.000.00----------------------------------------------------------------------------1.00-----