ID: uc007jwk.8
GENE: Kif1c(9)
chr11:70519211-70519451+


(1)
AGO.mut
(2)
AGO1.ip
(15)
AGO2.ip
(5)
B-CELL
(31)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(6)
EMBRYO
(6)
ESC
(4)
FIBROBLAST
(1)
KIDNEY
(8)
LIVER
(3)
LYMPH
(10)
OTHER
(2)
OTHER.mut
(2)
PIWI.ip
(1)
PIWI.mut
(3)
SKIN
(2)
SPLEEN
(11)
TESTES
(1)
TOTAL-RNA
(2)
UTERUS

Sense strand
CCGGGAGTGAGCGGGCTGACTCCTCAGGGGCCCGGGGGATGCGTCTAAAGGTGAGGATGGTGGATGCCTCAGGGGCTGTGCAGGGAGGGAGGTTGTTGATCGTCCCCTAGCACCCTTGCCGGCAAAGCAGAGGGCACGTGGATCTGATTGATAGGGGAAGGTCTCAATTCCACATTCCTGTCCTTTGCCAGGAAGGCGCCAACATCAATAAGTCCCTGACTACGCTTGGGAAGGTGATCTC
........................................................................................................................(((((((...((((...(((((..(((..(((........))))))..)))))..))))...)))))))....................................................
.......................................................................................................................120....................................................................191................................................
SizePerfect hitTotal NormPerfect NormSRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR206940(GSM723281)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR206941(GSM723282)
other. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
..........................................................................................................................................................................CACATTCCTGTCCTTTGCCAGT.................................................22140.001.004.00-7.00----3.00-1.00---1.003.00---3.00--2.00----2.00--1.00-1.00-----2.00---2.00--1.00----1.00---------------1.00-----1.00-1.00-----1.00--------1.00-1.00-----
............................................................................................................................AAGCAGAGGGCACGTGGATCTGT..............................................................................................2318.001.00-1.00------1.00-------------1.00-------1.00-1.00------------------------------------1.00--------1.00-----1.00-----------
............................................................................................................................AAGCAGAGGGCACGTGGATCT................................................................................................2118.008.00-1.00---------1.00----3.00-----1.00-----1.00----------------------------------1.00--------------------------------
.............................................................................................................................AGCAGAGGGCACGTGGATCTG...............................................................................................2117.007.00--------1.00------1.00---------1.00-----1.00----------1.00-------1.00-----------------------------------------1.00---
......................................................................................................................................................................ATTCCACATTCCTGTCCTTTGC.....................................................2217.007.00--------------------2.00---1.00----1.00----------1.00--------------------1.00-------------------------1.00--------
...........................................................................................................................................................................ACATTCCTGTCCTTTGCCAGT.................................................216.000.001.00--------2.00--1.00----1.00-------------------------------------------------------------------------1.00----
.............................................................................................................................AGCAGAGGGCACGTGGATCTGT..............................................................................................2216.007.00---2.00--1.00--------1.00---------1.00--------------------------------------------1.00-------------------------
.............................................................................................................................AGCAGAGGGCACGTGGATCTGA..............................................................................................2215.005.00---1.00------------------1.00----2.00--------------------------------------------1.00-----------------------
......................................................................................................................................................................ATTCCACATTCCTGTCCTTTGCCAGT.................................................2615.001.00-----------------2.00--1.00-------------------1.00-----------------------------------1.00-------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGA..............................................................................................2315.005.00---1.00-1.00------------------------------1.00------------------------------1.00-------------1.00--------------
.................................................................................................................................GAGGGCACGTGGATCTGAA.............................................................................................194.000.00----4.00-------------------------------------------------------------------------------------------
........................CAGGGGCCCGGGGGATGCGTCTAAAGG..............................................................................................................................................................................................2714.004.00----------4.00-------------------------------------------------------------------------------------
......................................................................................................................................................................ATTCCACATTCCTGTCCTTTGCC....................................................2314.004.00---------1.00--1.00--------------------1.00-------------------------------------------1.00------------------
........................................................................................................................................................................................................................TGACTACGCTTGGGAAG........1713.003.00-------------------3.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................CCTGACTACGCTTGGGAA.........1813.003.00------2.00----------------------------1.00------------------------------------------------------------
......................................................................................................................................................................ATTCCACATTCCTGTCCTTTGCCA...................................................2412.002.001.00------1.00----------------------------------------------------------------------------------------
.......................................................................................................................CGGCAAAGCAGAGGGCACGTGGAA..................................................................................................242.000.00--------1.00-------------------------------------------------------------------------1.00-------------
.............................................................................................................................AGCAGAGGGCACGTGGATCT................................................................................................2012.002.00-1.00---------1.00------------------------------------------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGTT.............................................................................................2412.001.00-2.00----------------------------------------------------------------------------------------------
.............................................................................................................................AGCAGAGGGCACGTGGATCTGTAA............................................................................................2412.007.00-1.00----------------------------------------------------------1.00-----------------------------------
..........................................................................................................................................................................CACATTCCTGTCCTTTGCCAGA.................................................2212.001.00------------------------1.00-------------------------------------1.00---------------------------------
.............................................................................................................................AGCAGAGGGCACGTGGATCTGTA.............................................................................................2312.007.00------------------------------------------1.00----1.00------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTT...............................................................................................2212.008.00---1.00------------------------------------------------------1.00-------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGAT.............................................................................................2412.002.00-----1.00------------------------------1.00-----------------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGAAA............................................................................................2512.005.00----------------------------------2.00-------------------------------------------------------------
...................................................................................GGAGGGAGGTTGTTGGAT............................................................................................................................................181.000.00--------------------------------------------------------------------1.00---------------------------
......................................................................................................................CCGGCAAAGCAGAGGGCACGTGG....................................................................................................2311.001.00--------------------------------------------------------------------------------------1.00---------
......................................................................................................................................................................ATTCCACATTCCTGTCCTTTG......................................................2111.001.00---------------------------------1.00--------------------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATAT................................................................................................211.000.00-------------------------------------------------------1.00----------------------------------------
........................CAGGGGCCCGGGGGATTCGT.....................................................................................................................................................................................................201.000.00----------------------------1.00-------------------------------------------------------------------
.............................................................................................................................AGCAGAGGGCACGTGGATC.................................................................................................1911.001.00-1.00----------------------------------------------------------------------------------------------
.................GACTCCTCAGGGGCCCGGGGGAT.........................................................................................................................................................................................................2311.001.00-----------------------------------------------------1.00------------------------------------------
......................CTCAGGGGCCCGGGGGATGCGTCTAAAGGAAG...........................................................................................................................................................................................321.000.00---------------------------------------------------------------------------1.00--------------------
........GAGCGGGCTGACTCCTCAGGGGCCCGGGGG...........................................................................................................................................................................................................3011.001.00------------------------------1.00-----------------------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGTAAA...........................................................................................2611.001.00---------------1.00--------------------------------------------------------------------------------
..............................................................................................................................GCAGAGGGCACGTGGCGCA................................................................................................191.000.00-----------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................................................................AGTCCCTGACTACGCTTGG............1911.001.00-------------1.00----------------------------------------------------------------------------------
.............................GCCCGGGGGATGCGTCTAAAGGA.............................................................................................................................................................................................231.000.00----------------------------------------------------------------1.00-------------------------------
.....................................................................................................................GCCGGCAAAGCAGAGGGCACGT......................................................................................................2211.001.00---------------------1.00--------------------------------------------------------------------------
..............................................................................................................................GCAGAGGGCACGTGGGGCA................................................................................................191.000.00-----------------------1.00------------------------------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGAG.............................................................................................2411.005.00--------1.00---------------------------------------------------------------------------------------
....................................................................TCAGGGGCTGTGCAGGGAGGGAGGT....................................................................................................................................................2511.001.00--------------------------------------------------------------------------------1.00---------------
....GAGTGAGCGGGCTGACTCCTCAGGG....................................................................................................................................................................................................................2511.001.00-----------------------------------1.00------------------------------------------------------------
...........................................................................................................................................................................................................................CTACGCTTGGGAAGGTGATC..2011.001.00------------------------------------------------------------------1.00-----------------------------
.............................................................................................................................AGCAGAGGGCACGTGGATCTGATTGA..........................................................................................2611.001.00----------------------------------------------1.00-------------------------------------------------
......GTGAGCGGGCTGACTCCTCAGG.....................................................................................................................................................................................................................2211.001.00---------------------------------------1.00--------------------------------------------------------
....GAGTGAGCGGGCTGACTCCTCAGGGGC..................................................................................................................................................................................................................2711.001.00-----------------------------------------------------------------------------------1.00------------
.............................................................................................................................AGCAGAGGGCACGTGGATCTTTAT............................................................................................2411.002.00-----1.00------------------------------------------------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTAT..............................................................................................2311.008.00--------------------------------1.00---------------------------------------------------------------
..........................................................................................................................................................................CACATTCCTGTCCTTTGCCAG..................................................2111.001.00-----------------------------------------------------------------------------------------1.00------
........................................................................................................................GGCAAAGCAGAGGGCACGTGA....................................................................................................211.000.00------------------------------------------------------1.00-----------------------------------------
.....................................................................................................................GCCGGCAAAGCAGAGGGCACGTGG....................................................................................................2411.001.00------------------------------------------------1.00-----------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGAGCTT...............................................................................................221.000.00-----1.00------------------------------------------------------------------------------------------
...................................................TGAGGATGGTGGATGATG............................................................................................................................................................................181.000.00---1.00--------------------------------------------------------------------------------------------
..................................................................................................................................AGGGCACGTGGATCTGT..............................................................................................171.000.00---------------------------------------------------1.00--------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGTA.............................................................................................2411.001.00-----------1.00------------------------------------------------------------------------------------
.......................................................................................................................CGGCAAAGCAGAGGGCACGTGGAG..................................................................................................241.000.00---------------------------------------1.00--------------------------------------------------------
......................................................................................................................CCGGCAAAGCAGAGGGCACGTGGATC.................................................................................................2611.001.00-------------------------------------------------------------------------------------1.00----------
....GAGTGAGCGGGCTGACTCCTCAGG.....................................................................................................................................................................................................................2411.001.00-------------1.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................TGACTACGCTTGGGAAGGTGATCTC2511.001.00---------------------------------------------------------1.00--------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTG...............................................................................................2211.001.001.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCCTGACTACGCTTGGGAAGG.......2111.001.00------1.00-----------------------------------------------------------------------------------------
............................................................................................................................AAGCAGAGGGCACGTGGATCTGAA.............................................................................................2411.005.00---------------------------------------------1.00--------------------------------------------------
................................................................................................................................................................................................................TAAGTCCCTGACTACGCTTGGGAAGG.......2611.001.00----------------------------------------------------1.00-------------------------------------------
..............................................................................................................................GCAGAGGGCACGTGGAGCC................................................................................................191.000.00--------------------------------------------------------------------------1.00---------------------
......................................................................................................................................................................ATTCCACATTCCTGTCCTTTGCCAG..................................................2511.001.00--------------------------------------------------------1.00---------------------------------------
...................................................................................GGAGGGAGGTTGTTGTG.............................................................................................................................................171.000.00------------1.00-----------------------------------------------------------------------------------
.CGGGAGTGAGCGGGCT................................................................................................................................................................................................................................1620.500.50-------------------------------------------0.50----------------------------------------------------
..........................GGGGCCCGGGGGAT.........................................................................................................................................................................................................1450.200.20-----------------------0.20------------------------------------------------------------------------
.....................................................................CAGGGGCTGTGCAGGG............................................................................................................................................................1690.110.11--------------------------------------------0.11---------------------------------------------------

Antisense strand
CCGGGAGTGAGCGGGCTGACTCCTCAGGGGCCCGGGGGATGCGTCTAAAGGTGAGGATGGTGGATGCCTCAGGGGCTGTGCAGGGAGGGAGGTTGTTGATCGTCCCCTAGCACCCTTGCCGGCAAAGCAGAGGGCACGTGGATCTGATTGATAGGGGAAGGTCTCAATTCCACATTCCTGTCCTTTGCCAGGAAGGCGCCAACATCAATAAGTCCCTGACTACGCTTGGGAAGGTGATCTC
........................................................................................................................(((((((...((((...(((((..(((..(((........))))))..)))))..))))...)))))))....................................................
.......................................................................................................................120....................................................................191................................................
SizePerfect hitTotal NormPerfect NormSRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR206940(GSM723281)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR206941(GSM723282)
other. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
....................................................GAGGATGGTGGATGCGTGT.......................................................................................................................................................................... 192.000.00--------------------------------------1.00------------------------------------------------------1.00--
..............................................................................................................................................................................TTCCTGTCCTTTGCCCGGC................................................ 191.000.00-------------------------------------------1.00----------------------------------------------------
....................................................GAGGATGGTGGATGCGTG........................................................................................................................................................................... 181.000.00--------------------------------------1.00---------------------------------------------------------
........................................................................................................................GGCAAAGCAGAGGGCACCGCC.................................................................................................... 211.000.00-----------------------------------------------------------1.00------------------------------------
.......TGAGCGGGCTGACTC........................................................................................................................................................................................................................... 1520.500.50----------------------------------------------------------------------------------------------0.50-
................................................................................................................................................................................................AAGGCGCCAACATC................................... 1470.140.14-----------------------------------------------------------------------------------------------0.14