ID: uc007hjx.65
GENE: Lrp1(23)
chr10:127013644-127013915-


(1)
AGO.mut
(1)
AGO1.ip
(13)
AGO2.ip
(20)
BRAIN
(2)
CELL-LINE
(9)
EMBRYO
(2)
ESC
(7)
FIBROBLAST
(5)
LIVER
(1)
LUNG
(12)
OTHER
(4)
OTHER.mut
(1)
PIWI.ip
(2)
PIWI.mut
(1)
SKIN
(2)
SPLEEN
(13)
TESTES
(1)
THYMUS
(1)
TOTAL-RNA
(2)
UTERUS

Sense strand
CTACGAGGGCTGGGTCTTGGAGCCTGACGGGGAAAGCTGCCGCAGTCTGGGTAAGACGCAGTGGGGTCAAGGTGAGCCAGCCAAGCAGGCCTGGTCACGCGCCTGAGCTACAGTGGGCTGAAGGCCAGGGCTAGCAGGGACGCTGTATGTATATCCCAGGACAGGGTGGCACAGTGAGTGGCTCTAAGCCCTTCGCTGACCTGAACACTTGCCTCCCTCCAGATCCCTTCAAACCGTTCATCATCTTCTCCAACCGCCACGAGATCAGGCGC
..............................................................................................................................................................(((..(((.(((((((((((.(((.....))).)))))))...........)))).))))))....................................................
...........................................................................................................................................................156...............................................................222................................................
SizePerfect hitTotal NormPerfect NormmjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesWT3()
Testes Data. (testes)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR206942(GSM723283)
other. (brain)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR206941(GSM723282)
other. (brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
GSM510444(GSM510444)
brain_rep5. (brain)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
GSM566419(GSM566419)
"Endougenous small RNA from mouse NIH3T3 cells, without MHV-68 infection". (fibroblast)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR037937(GSM510475)
293cand2. (cell line)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
mjTestesWT2()
Testes Data. (testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGG...........................................................................................21113.0013.00-3.00-----1.00--1.002.00-2.00-------------1.00--1.001.00--------------------1.00-------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCT.........................................................................................2218.008.00------------4.00--------2.00--1.00------------------1.00----------------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGG...........................................................................................2018.008.00----------2.00----------------1.00--1.00---2.00------------------------------1.00----1.00-------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGA...........................................................................................2116.001.00-------1.00--1.002.00-------------------1.00---------------1.00------------------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCCA...................................................2215.005.00------2.00----------1.00--------1.00------------1.00--------------------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGC..........................................................................................2115.005.00------------------1.00----3.001.00-----------------------------------------------------
..ACGAGGGCTGGGTCTTGGAGCCT.......................................................................................................................................................................................................................................................2315.005.00--------3.00----------2.00----------------------------------------------------------
.............................................................................................................................................................AGGACAGGGTGGCACAGTGAGTG............................................................................................2315.005.00---1.00--------------1.00----------------1.00----------1.00--------1.00----------------------
..................................AGCTGCCGCAGTCTGGATC...........................................................................................................................................................................................................................194.000.00--4.00---------------------------------------------------------------------------
.............................................................................................................................................................AGGACAGGGTGGCACAGTGAGTGG...........................................................................................2414.004.00---1.00---------------------1.00--------------1.00----------1.00--------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCTCTT......................................................................................2513.003.00------3.00-----------------------------------------------------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCTCT.......................................................................................2413.003.00-1.00-2.00--------------------------------------------------------------------------
.............................................................................................................................................................AGGACAGGGTGGCACAGTGAGTGTT..........................................................................................2513.005.00---------2.00--------------------------------------------------------------1.00-----
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCTC........................................................................................2413.003.00-1.00-----------1.00---------------------------------------1.00------------------------
.............................................................................................................................................................AGGACAGGGTGGCACAGTGAGTGT...........................................................................................2413.005.00------------------1.00------1.00--1.00-------------------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCT.........................................................................................2313.003.00------------------------------------------1.00------1.00-----------------------1.00----
.......................CTGACGGGGAAAGCTGCCGCA....................................................................................................................................................................................................................................2112.002.00---------2.00--------------------------------------------------------------------
....GAGGGCTGGGTCTTGGAG..........................................................................................................................................................................................................................................................1812.002.002.00-----------------------------------------------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCTCT.......................................................................................2512.002.00---------------------1.00---------------1.00----------------------------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCC....................................................2112.002.00--------------------------1.00-----------------------------------1.00---------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCTAAGT.....................................................................................2712.003.00-----------------------------------------2.00------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCTAA.......................................................................................2512.003.00-------2.00----------------------------------------------------------------------
..ACGAGGGCTGGGTCTTGGAGCC........................................................................................................................................................................................................................................................2212.002.00--------1.00-------------1.00-------------------------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGC..........................................................................................2212.002.00-----1.00--------------1.00---------------------------------------------------------
.................TGGAGCCTGACGGGGAAAGCTGCC.......................................................................................................................................................................................................................................2412.002.00-----2.00------------------------------------------------------------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCCAA..................................................2312.005.00---1.00----------------------------------1.00---------------------------------------
................TTGGAGCCTGACGGGGAA..............................................................................................................................................................................................................................................1812.002.00--------------2.00---------------------------------------------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCTC........................................................................................2312.002.00--------------1.001.00--------------------------------------------------------------
..........................................................................................................................................................................................................GAACACTTGCCTCCCTCCAGAT................................................2211.001.00--------------------1.00---------------------------------------------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCA....................................................211.000.001.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................CTGAACACTTGCCTCCCTCCAG..................................................2211.001.00------------------------------------------------------------1.00-----------------
....GAGGGCTGGGTCTTGGAGCCT.......................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------1.00------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCTCCTT.....................................................................................2611.002.00------------------------------------1.00-----------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTG............................................................................................2011.001.00---------------1.00--------------------------------------------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCTA........................................................................................2311.008.00------------------------------------------------------1.00-----------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGT.............................................................................................1911.001.00-1.00----------------------------------------------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCA.........................................................................................2311.002.00--------------------------------------------1.00---------------------------------
.....AGGGCTGGGTCTTGGAGC.........................................................................................................................................................................................................................................................1811.001.00-----------------------------1.00------------------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGA..........................................................................................2211.0013.00-------------------------------------------------------------------1.00----------
..ACGAGGGCTGGGTCTTGGAGCCTGACGG..................................................................................................................................................................................................................................................2811.001.00----------------------1.00-------------------------------------------------------
.......GGCTGGGTCTTGGAGCCTGACGGGGA...............................................................................................................................................................................................................................................2611.001.00----------------------------------------------------------------1.00-------------
.....AGGGCTGGGTCTTGGAGCCTGACGGGGAAAGC...........................................................................................................................................................................................................................................3211.001.001.00-----------------------------------------------------------------------------
.................TGGAGCCTGACGGGGAAAGCTG.........................................................................................................................................................................................................................................2211.001.00-------------------------1.00----------------------------------------------------
.......................CTGACGGGGAAAGCTGCC.......................................................................................................................................................................................................................................1811.001.00-----1.00------------------------------------------------------------------------
.......................................................................................................................................................................................................................................AACCGTTCATCATCTTCTCCAACCGCC..............2711.001.00---------------------------------------------------------------------------1.00--
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGTT..........................................................................................2211.001.00-------------1.00----------------------------------------------------------------
................TTGGAGCCTGACGGGGAAA.............................................................................................................................................................................................................................................1911.001.00----------------------------1.00-------------------------------------------------
.....................................................................................................................................................................................................................................CAAACCGTTCATCATCTTCTCC.....................2211.001.00-------------------1.00----------------------------------------------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCAT...................................................221.000.00----1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCCAT..................................................2311.005.00--------------------1.00---------------------------------------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCTCTTT.....................................................................................2611.003.00------------------------------------1.00-----------------------------------------
...........GGGTCTTGGAGCCTGACGG..................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------1.00---------------------------
.........................................................................................................................................................................................................TGAACACTTGCCTCCCTCCAGT.................................................221.000.00-----------------1.00------------------------------------------------------------
..........TGGGTCTTGGAGCCTGACGGG.................................................................................................................................................................................................................................................2111.001.00--------------------------------------1.00---------------------------------------
.....................GCCTGACGGGGAAAGC...........................................................................................................................................................................................................................................1611.001.00--------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCCAGA.................................................2411.001.00--------------------------1.00---------------------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCTTTTT.....................................................................................2711.003.00-------------------------------------------------------------1.00----------------
.............GTCTTGGAGCCTGACGGGGAAAG............................................................................................................................................................................................................................................2311.001.00----------------------1.00-------------------------------------------------------
.........CTGGGTCTTGGAGCCTGACGGGGAAAGC...........................................................................................................................................................................................................................................2811.001.00--------------------------------1.00---------------------------------------------
............................................................................................................................................................CAGGACAGGGTGGCACAGTGA...............................................................................................2111.001.00--------------------------------------------------------------------1.00---------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGCTCAA......................................................................................2611.003.00-------1.00----------------------------------------------------------------------
.................................................................................................................................................................CAGGGTGGCACAGTGAGTGGCTTAA......................................................................................2511.008.00------------------------------------------------1.00-----------------------------
.........CTGGGTCTTGGAGCCTGACG...................................................................................................................................................................................................................................................2011.001.00-----------------------------1.00------------------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGGAAT........................................................................................2411.0013.00------------------------1.00-----------------------------------------------------
..ACGAGGGCTGGGTCTTGGAGCCTGACGGGG................................................................................................................................................................................................................................................3011.001.00--1.00---------------------------------------------------------------------------
............................GGGGAAAGCTGCCGCA....................................................................................................................................................................................................................................1611.001.00---------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................................GAACACTTGCCTCCCTCCAGA.................................................2111.001.00---------------------------------------------------------------1.00--------------
......................................................................................................................................................ATATCCCAGGACAGGGTGGCACAGTGAGTGGCTCTAAGCCCTTCGCTGACCTGAACACTTGCCTCCCTCCAG..................................................7211.001.00-----------------------------------------------------------------------1.00------
.........CTGGGTCTTGGAGCCTGACGGGGAA..............................................................................................................................................................................................................................................2511.001.00-----------------1.00------------------------------------------------------------
..................................................................................................................................................................................................................................................ATCTTCTCCAACCGCCACGAGATCAGGCGC3011.001.00---------------------------------------------1.00--------------------------------
...CGAGGGCTGGGTCTTGGAGC.........................................................................................................................................................................................................................................................2011.001.00---------------------------------------1.00--------------------------------------
........................TGACGGGGAAAGCTGCC.......................................................................................................................................................................................................................................1711.001.00--------------------------------1.00---------------------------------------------
........................................................................................................................................................................................................CTGAACACTTGCCTCCCTCCA...................................................2111.001.00--------------------------------------------------------------------------1.00---
..................................................................................................................................................................................................................................CTTCAAACCGTTCATCATCTTCTCCAAC..................2811.001.00-------------------------------------1.00----------------------------------------
................................................................................................................................................................ACAGGGTGGCACAGTGAGTGAA..........................................................................................2211.001.00---------------------------------------------------------1.00--------------------
........GCTGGGTCTTGGAGCCTGACGGGGA...............................................................................................................................................................................................................................................2511.001.001.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................CCTGAACACTTGCCTCCCTCCTAT.................................................2411.002.00----------------------------------------1.00-------------------------------------
................................................................................................................GTGGGCTGAAGGCCAGGG..............................................................................................................................................1820.500.50----------------------------------------------------------------------------0.50-
...CGAGGGCTGGGTCTTGGA...........................................................................................................................................................................................................................................................1820.500.500.50-----------------------------------------------------------------------------
.............................................................................................................ACAGTGGGCTGAAGG....................................................................................................................................................15100.100.10-----------------------------------------------------------------------------0.10

Antisense strand
CTACGAGGGCTGGGTCTTGGAGCCTGACGGGGAAAGCTGCCGCAGTCTGGGTAAGACGCAGTGGGGTCAAGGTGAGCCAGCCAAGCAGGCCTGGTCACGCGCCTGAGCTACAGTGGGCTGAAGGCCAGGGCTAGCAGGGACGCTGTATGTATATCCCAGGACAGGGTGGCACAGTGAGTGGCTCTAAGCCCTTCGCTGACCTGAACACTTGCCTCCCTCCAGATCCCTTCAAACCGTTCATCATCTTCTCCAACCGCCACGAGATCAGGCGC
..............................................................................................................................................................(((..(((.(((((((((((.(((.....))).)))))))...........)))).))))))....................................................
...........................................................................................................................................................156...............................................................222................................................
SizePerfect hitTotal NormPerfect NormmjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesWT3()
Testes Data. (testes)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR206942(GSM723283)
other. (brain)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR206941(GSM723282)
other. (brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
GSM510444(GSM510444)
brain_rep5. (brain)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
GSM566419(GSM566419)
"Endougenous small RNA from mouse NIH3T3 cells, without MHV-68 infection". (fibroblast)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR037937(GSM510475)
293cand2. (cell line)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
mjTestesWT2()
Testes Data. (testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
...............................................................................................................................................................................................................................TCCCTTCAAACCGTTCATCATCTTC........................ 2512.002.00----------------2.00-------------------------------------------------------------
.............................GGGAAAGCTGCCGCAA................................................................................................................................................................................................................................... 161.000.00-----------------------------------1.00------------------------------------------
...................................................................................................CGCCTGAGCTACAGTGGTA.......................................................................................................................................................... 191.000.00------------------------------------------------------------------1.00-----------
..................................................................................................................................................................................................................................CTTCAAACCGTTCATCATC........................... 1911.001.00---------------------------------------------------------------------1.00--------
.............................................................................................................................................................................................................................GATCCCTTCAAACCGTTCATCATCTTC........................ 2711.001.00----1.00-------------------------------------------------------------------------
...................................GCTGCCGCAGTCTGGGG............................................................................................................................................................................................................................ 171.000.00---------------------------------1.00--------------------------------------------
..................................AGCTGCCGCAGTCTGAC............................................................................................................................................................................................................................. 171.000.00---------------------------------1.00--------------------------------------------
....................AGCCTGACGGGGAAAAGCA......................................................................................................................................................................................................................................... 191.000.00----------------------------------------------------------1.00-------------------
......................................................................................................................................................................................................................CCCTCCAGATCCCTTCAAACCGTTCA................................ 2611.001.00----------------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................CCTCCAGATCCCTTCAAACCGTTCA................................ 2511.001.00----1.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................CCTTCAAACCGTTCATCATCTTCTCCAAT.................. 291.000.00----1.00-------------------------------------------------------------------------
.........................................GCAGTCTGGGTAAGACGCAGTGGGGTCAA.......................................................................................................................................................................................................... 2911.001.00----1.00-------------------------------------------------------------------------