ID: uc007gdq.8
GENE: Rexo1(2)
chr10:80008282-80008670-


(1)
AGO.mut 		(1)
AGO1.ip 		(12)
AGO2.ip 		(1)
AGO3.ip 		(3)
B-CELL 		(24)
BRAIN 		(3)
CELL-LINE 		(1)
DCR.mut 		(1)
DGCR8.mut 		(10)
EMBRYO 		(9)
ESC 		(5)
FIBROBLAST 		(1)
HEART 		(2)
KIDNEY 		(7)
LIVER 		(2)
LYMPH 		(10)
OTHER 		(11)
OTHER.mut 		(3)
PIWI.ip 		(3)
PIWI.mut 		(2)
SKIN 		(2)
SPLEEN 		(30)
TESTES 		(1)
THYMUS 		(6)
TOTAL-RNA

Sense strand
TTGAGGAGTGTCTCAAGTTCTGTTCGTCCAACCAGGAGGCCATCGAGAAGGTGGGCCCTGGAGTGCACATTCCCTTCACGGGCAGGACTGCAGGCCCTGGCCATTGTGGCCTTGAGCTGTCGCTGGGAAGGTCCCATGTGTCTTCCTGGCTCTCCTCTAGGCATCTTGGTTCACACTGACTGCCTGTATCATGTCCTCGTGAGTGACAGGCTGGGCCATGTGCCTGACTCAGGCTGGTCCTGCACCAGCCACTGCCATCCCAGAGCAGCTGATCCTACTGCCCATGCTCCTGGGTGCCAGGCTCTGCCAGGACCTTAGGCTGAGCACTGTCTTACCCAGGCCCTGAATGAGGAAAAGGTGGCGTATGACCGCAGTCCCAGCAAGAACAT
................................................................................................................................................................................................................................................................................................((((((((.(((((((.(((.........))).)))).)))...)))))))).................................................
..........................................................................................................................................................................................................................................................................................283............................................................346.........................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesWT4()
Testes Data. (testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjLiverWT1()
Liver Data. (liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR206940(GSM723281)
other. (brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesWT2()
Testes Data. (testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206939(GSM723280)
other. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR206941(GSM723282)
other. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)		mjTestesWT3()
Testes Data. (testes)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR553586(SRX182792)
source: Testis. (testes)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR037911(GSM510448)
newborn_rep4. (total RNA)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR037900(GSM510436)
testes_rep1. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTTT...............................................23141.0012.004.00--5.00----2.001.00---1.00-2.002.002.00-2.00-----2.00---2.00---1.00-1.00-------------------1.00----------1.00----------1.00-----1.00-----1.00-1.00-1.00--1.00-1.001.00----1.00---1.001.00---1.00---
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACT...............................................23114.0012.001.00-----1.00------1.00---1.001.00---2.00---2.00---1.00---------------------1.002.00---------------------------------------------------1.00-----------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACC...............................................23113.0012.00----4.00------------1.00-----1.00--1.00---2.00--------------1.00-2.001.00--------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGC..................................................................................20112.0012.00----1.00-1.00-------2.00------4.00---------1.002.00------------------------------------------------------1.00-----------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAG..................................................20112.0012.00--8.00---------------1.00-----------------1.00--------------1.00------1.00----------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGAAT...............................................23112.0012.00-8.00------------------1.00-------------1.00-------1.00-1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGAC................................................2218.0012.00---1.001.00---1.00-------------1.00-----1.00----------1.00----------------1.00-----1.00------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGATT...............................................2318.0012.00---------2.00-----1.001.00---1.00-------------1.00-----------------1.00-1.00--------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTT................................................2218.0012.004.00-----1.00------------------1.00--------------------------------------------------1.00-----------1.00----------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTTTT..............................................2416.0012.00---------2.00------------------1.00------------1.00-----------------------1.00----------------------------------------1.00----------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCAAT..............................................................................2416.001.00-----5.00-----------------------------------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGT.................................................2115.0012.001.00----------------------1.00----------------2.00--------------------------------------------------------------1.00-------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCC.................................................................................2114.004.00-------2.00-----------------------------------------1.00------1.00------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACA...............................................2313.0012.00------------------1.00-----------------1.00--------------------1.00-----------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCTGGGTGCCAGGCTCTGCCA................................................................................2113.003.00---------------1.00---------------1.00--------------------------------1.00----------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGAT................................................2213.0012.00-2.00-----------------1.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACTA..............................................2413.0012.00-------3.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................AAAAGGTGGCGTATGACCGCAGT..............2313.003.00------------------------3.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGATT...............................................2213.001.00--------2.00-------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGA.................................................2113.0012.00------1.00----------------1.00--------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCT....................................................................................1813.003.00---------------------------1.00-----------1.00---------------------------------------1.00-------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCAAA..............................................................................2412.001.00-----------1.00----------------------------------1.00----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................ATGACCGCAGTCCCAGCAAGAACAT2512.002.00-----------1.00---1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCA...................................................1912.002.00-------------1.00---1.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCAGTAAG...........................................................................272.000.00-----2.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTCT...............................................2312.0012.00-------------------------------1.00-----------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................................................................................................................................................................................TGAATGAGGAAAAGGTGGCGTATGAC....................2612.002.00------------1.00-1.00------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTCC...............................................2312.0012.00-------------------------------------------------------1.00---------------------------------------1.00---------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGA..................................................................................202.000.00-----------------------------------------1.00----------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCAATAT............................................................................2612.001.00-------------------------------------------------1.00-------------1.00-----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................TGACCGCAGTCCCAGCAAGAACA.2312.002.00----------1.00---------1.00------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGAA................................................2111.001.00-------------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................CTCCTGGGTGCCAGGCTCTGCCA................................................................................2311.001.00-------------------------------------1.00-------------------------------------------------------------------------------
..........................TCCAACCAGGAGGCCATCGA.......................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------1.00-------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGAATA..............................................2311.001.00------------------------------------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACAA..............................................2411.0012.001.00--------------------------------------------------------------------------------------------------------------------
..................TCTGTTCGTCCAACCAGGAGGCC............................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------------------1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................CTCCTGGGTGCCAGGCTCTGC..................................................................................2111.001.00-------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGACC...............................................2211.001.00------1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCAAT...............................................................................2311.0012.00--------1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTTA...............................................2311.0012.00-----------------------1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGAAAAGGTGGCGTATGACCGCAGTC.............2611.001.00--------------------------------------------------------------------------------1.00------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGTTT...............................................2211.001.00------------------------------------------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................................................CTGGGCCATGTGCCTTGT.................................................................................................................................................................181.000.00-------------------------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GCTCCTGGGTGCCAGGCTCTGC..................................................................................2211.001.00--------------------------------------------------------------------1.00------------------------------------------------
..................................GGAGGCCATCGAGAAG...................................................................................................................................................................................................................................................................................................................................................1611.001.00------------------------1.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCACT..............................................................................2411.001.00-----------------------------------------------------------------------1.00---------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACCA..............................................2411.0012.00-------------1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCAATT.............................................................................2511.001.00----------------------------------------------------------------------------------------------------------------1.00----
................................CAGGAGGCCATCGAGAAG...................................................................................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------1.00------------------------
................................................................................................................................................................................................................................................................................................CCTGGGTGCCAGGCTCTGCCAAT..............................................................................2311.003.00--------------------------------------1.00------------------------------------------------------------------------------
.....................GTTCGTCCAACCAGGAGGCCAT..........................................................................................................................................................................................................................................................................................................................................................2211.001.00----------1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCTAG..............................................................................2411.004.00---------------------------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCAT................................................................................2211.0012.00--------------------------------------------------------------------------------------------------------------1.00------
........................................................................................................................................................................................................................................................................................................................................................GAATGAGGAAAAGGTGGCGT.........................2011.001.00---------------------------------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................................................................................................................................................................................................................................AGGAAAAGGTGGCGTATGAC....................2011.001.00---------------------------------------------------------------------------------1.00-----------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCC....................................................1821.001.00----------------------------------------------------------1.00----------------------------------------------------------
..............................................................................................................................................................................................................................CCTGACTCAGGCTGGTCCTGC..................................................................................................................................................2111.001.00----1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CTGGGTGCCAGGCTCTGAAAA...............................................................................211.000.00------------------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACGT..............................................2411.0012.00-------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCATTTA...............................................2311.002.001.00--------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ATGTGTCTTCCTGGCTCTCCTCTAGGCATCTTGGT...........................................................................................................................................................................................................................3511.001.00------------------------------------------------------1.00--------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGAAGA..............................................2311.001.00---------------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCTGGGTGCCAGGCTCTGCC.................................................................................2011.001.00-------------------------------------------------------------------------------------1.00-------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TGAGGAAAAGGTGGCGTA........................1811.001.00----------------------------------------------------------------------------------------------1.00----------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCAGAA.............................................................................251.000.00---------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTAGGCTGAGCACTGTCTTACCCAG..................................................2511.001.00------------------------------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................CCTCGTGAGTGACAGGCT.................................................................................................................................................................................1811.001.00------------------------------------------------------------------------1.00--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGACCT..............................................2411.0012.00----------------------------------------------------------------------------------------------------1.00----------------
.....................................................................................................................................................................................................................................................................................................................................................CCTGAATGAGGAAAAGGTGGCGTAT.......................2511.001.00------------------------------------------------------------------------------------------------------1.00--------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCATAC................................................2211.002.001.00--------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCA................................................................................2211.001.00-----------------------------------------------------------------------------------------------------------1.00---------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTTAT..............................................2411.0012.00-------------------------1.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GCTGAGCACTGTCTTACCCAGTTT...............................................241.000.00----------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................AAAAGGTGGCGTATGACCGCAGTCC............2511.001.00---1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................AGGAAAAGGTGGCGTATGA.....................1911.001.00---------------------------1.00-----------------------------------------------------------------------------------------
....................................................................ATTCCCTTCACGGGCAGGACTGCAGGCC.....................................................................................................................................................................................................................................................................................................2811.001.00--------------------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCAA...............................................................................2311.001.00-----------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGTTC...............................................2311.0012.00----------------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGTTTT...............................................................................231.000.00------------------------------------------------------------------------------------------1.00--------------------------
................................................................................................................................................................................................................................................................................................CCTGGGTGCCAGGCTCTGCCAA...............................................................................2211.003.00----------1.00----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGATTT..............................................2311.001.00----------1.00----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGTTTT..............................................2311.001.00-------------------------------------------1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCATTA................................................2211.002.001.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................GAGGAAAAGGTGGCGTATGACCGC.................2411.001.00-----------------------------------1.00---------------------------------------------------------------------------------
...................CTGTTCGTCCAACCAGGAGGCCATCGAGAA....................................................................................................................................................................................................................................................................................................................................................3011.001.00--------------------------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGTTTC..............................................2311.001.00---------------------------------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................AATGAGGAAAAGGTGTGAT.........................191.000.00-------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................GAGGAAAAGGTGGCGT.........................1611.001.00----------1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGAAGA..............................................2411.0012.00--------------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................................................................................................................................................................CTGGGTGCCAGGCTCTGACAA...............................................................................211.000.00----------------------------------------------1.00----------------------------------------------------------------------
..............AAGTTCTGTTCGTCCAACCAGGA................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------------1.00------------------------------------------------------------------
.................................................................................................................GAGCTGTCGCTGGGAAGGTCCCAT............................................................................................................................................................................................................................................................2411.001.00-------------------------------------1.00-------------------------------------------------------------------------------
.........................................................................................................................................................................................................................ATGTGCCTGACTCAGGCTGG........................................................................................................................................................2011.001.00----------------------1.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAG..................................................1911.001.00------1.00--------------------------------------------------------------------------------------------------------------
..............AAGTTCTGTTCGTCCAACCAGGAGGCCA...........................................................................................................................................................................................................................................................................................................................................................2811.001.00---------------------------------------------1.00-----------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGT.................................................2011.001.00---1.00-----------------------------------------------------------------------------------------------------------------
.................................AGGAGGCCATCGAGAAGG..................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCTGGGTGCCAGGCTCTGTAT................................................................................211.000.00--------------------------------------------------------------------------------------1.00------------------------------
............TCAAGTTCTGTTCGTCCAACCAGGAG...............................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGAGCACTGTCTTACCCAGA.................................................2011.001.00-----------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTGAGCACTGTCTTACCCAGAATT..............................................2411.0012.00--------------------------------------------1.00------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................ATGACCGCAGTCCCAGCAAGAAC..2311.001.00--------------------1.00------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCTGGGTGCCAGGCTCTGCCTTAT.............................................................................2511.004.00------------------------------------------------------------------------------------1.00--------------------------------
..................................................................................................................................................................................................................................................................................................TGGGTGCCAGGCTCTGCCAG...............................................................................2020.500.50------------------------------------------------------------------------------------------------------------------0.50--
.................................................................................................................................................................................................................................................................................................CTGGGTGCCAGGCTCTGCCA................................................................................2020.500.50----------0.50----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGAAAAGGTGGCGTA........................1520.500.50-------------------------------------------------------------------------------------------------------------------0.50-
................................................................................................................................................................................................................................TGACTCAGGCTGGTCC.....................................................................................................................................................1640.250.25------------------0.25--------------------------------------------------------------------------------------------------

Antisense strand
TTGAGGAGTGTCTCAAGTTCTGTTCGTCCAACCAGGAGGCCATCGAGAAGGTGGGCCCTGGAGTGCACATTCCCTTCACGGGCAGGACTGCAGGCCCTGGCCATTGTGGCCTTGAGCTGTCGCTGGGAAGGTCCCATGTGTCTTCCTGGCTCTCCTCTAGGCATCTTGGTTCACACTGACTGCCTGTATCATGTCCTCGTGAGTGACAGGCTGGGCCATGTGCCTGACTCAGGCTGGTCCTGCACCAGCCACTGCCATCCCAGAGCAGCTGATCCTACTGCCCATGCTCCTGGGTGCCAGGCTCTGCCAGGACCTTAGGCTGAGCACTGTCTTACCCAGGCCCTGAATGAGGAAAAGGTGGCGTATGACCGCAGTCCCAGCAAGAACAT
................................................................................................................................................................................................................................................................................................((((((((.(((((((.(((.........))).)))).)))...)))))))).................................................
..........................................................................................................................................................................................................................................................................................283............................................................346.........................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesWT4()
Testes Data. (testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjLiverWT1()
Liver Data. (liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR206940(GSM723281)
other. (brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesWT2()
Testes Data. (testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206939(GSM723280)
other. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR206941(GSM723282)
other. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)		mjTestesWT3()
Testes Data. (testes)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR553586(SRX182792)
source: Testis. (testes)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR037911(GSM510448)
newborn_rep4. (total RNA)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR037900(GSM510436)
testes_rep1. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
.......GTGTCTCAAGTTCTGTTCGTCCAACCA................................................................................................................................................................................................................................................................................................................................................................... 2712.002.00------------2.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................CGTATGACCGCAGTCCCAGCAAGA.... 2411.001.00------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................TCTCCTCTAGGCATCTTGGTTCACA...................................................................................................................................................................................................................... 2511.001.00--------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CCTACTGCCCATGCTCCTGGGTGCCA.......................................................................................... 2611.001.00--------------1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................GTATGACCGCAGTCCCAGCAAGAACA. 2611.001.00------------1.00--------------------------------------------------------------------------------------------------------
............................................GAGAAGGTGGGCCCTGATAT..................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................................................................................................................................ACTGCCATCCCAGAGCAAGA....................................................................................................................... 201.000.00---------------------------------------------------------------------------1.00-----------------------------------------
.....................GTTCGTCCAACCAGGCTC.............................................................................................................................................................................................................................................................................................................................................................. 181.000.00-----------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................CGTATGACCGCA................ 1260.170.17--------------------------------------------------------------------------------------------------------------------0.17