ID: mmu-mir-7115
GENE: Arrb2(9)
chr11:70251481-70251870+


(1)
AGO.mut 		(3)
AGO2.ip 		(5)
B-CELL 		(21)
BRAIN 		(2)
CELL-LINE 		(2)
DGCR8.mut 		(10)
EMBRYO 		(3)
ESC 		(1)
FIBROBLAST 		(1)
KIDNEY 		(8)
LIVER 		(3)
LYMPH 		(14)
OTHER 		(5)
OTHER.mut 		(1)
OVARY 		(1)
PANCREAS 		(3)
PIWI.ip 		(1)
PIWI.mut 		(8)
SPLEEN 		(16)
TESTES 		(2)
THYMUS 		(2)
TOTAL-RNA 		(1)
UTERUS

Sense strand
CCATGTCACCAACAATTCTGCCAAGACCGTCAAGAAGATCAGAGTGTCTGGTAGGAGGTGGGGGTGGGCATGGGGATAGGGAAGGAAGTCCCTACTTAGAAAGGCTGCTGCTGCCATGTCAGCCCAGGCCGTGTCGCAGTGTGGGAAACCTACCGGGCCATAAAGAATTGAGTCTGTTCCAGAAGAGATACATGGCCCTAGTGTTTACTATAGTAGGTCTGTTGGCCAGGGGTGGAAGGTGGAGGTGTGCTGCCCCCATGGGGTTTCCACCATGTGGTCGGGGGTTGTGGTGCCGAATTGTCTGTGTCACCCAAAGCCACTTGGTCCCCTGCCCCCACAGTGAGACAGTACGCCGACATTTGCCTCTTCAGCACCGCGCAGTACAAGTGT
...................................................................................................................................................................(((.....((((.((....)).)))).((..(((((....(((((....)))))......(((((..((((((((((((.(((.....))).))))....))))))))...))))).)))))..))...........))).......................................................................................
..............................................................................................................................................................159...............................................................................................................................................305...................................................................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		mjLiverWT1()
Liver Data. (liver)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR073954(GSM629280)
total RNA. (blood)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR553586(SRX182792)
source: Testis. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR206940(GSM723281)
other. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		GSM475281(GSM475281)
total RNA. (testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTGT.........................................................................................24154.0054.0021.00-5.001.002.00-4.002.004.001.00-------1.00----1.00-1.00--1.00-1.00--------2.00-----1.00----1.00-------1.00----------1.00-----------------1.00---1.00--1.00-----
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAAT............................................................................................21127.0027.007.004.002.001.003.00-1.001.00--------------1.00--------1.00-----------------1.00-1.00--1.00----1.00----------------------------1.001.00---------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTG..........................................................................................23116.0016.005.00-1.00---------------2.00-------------------------1.00-2.00-1.00--1.00--------1.00-------------------1.00------1.00-----------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTGA.........................................................................................24111.0016.00-8.00----1.00-1.00------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATT...........................................................................................22110.0010.003.00-1.00------------2.00-------------1.00------------------------------------------------1.00------1.00------1.00------
...................................................................................................................................................................AGAATTGAGTCTGTTCCAGAAGAG...........................................................................................................................................................................................................2416.006.00-6.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CGGGGGTTGTGGTGCCGAATTGT.........................................................................................2316.006.00--1.00---------------------2.00---------------------------1.00------------1.00-----------------1.00---------------
..............................................................................................................................................................................................................................................................................................................................ACTTGGTCCCCTGCCCCCACAG..................................................2216.006.001.00---------------1.00-----------------1.00-2.00--1.00-----------------------------------------------------------
......................................................................................................................................................................................................................................................................................CGGGGGTTGTGGTGCCGAATTGTC........................................................................................2416.006.001.00------1.00--------1.00----1.00--------1.00---------------------------------------------------------------1.00----
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAA.............................................................................................2014.004.001.00----------1.00---------1.00-----------------------------------------1.00-----------------------------------
........................................................................................................................................................................TGAGTCTGTTCCAGAAGGC...........................................................................................................................................................................................................193.000.00-----------------------2.00-----------------------------------------------------1.00---------------------
..............................................................................................................................................................................................................................................................................................................................ACTTGGTCCCCTGCCCCCACAGT.................................................2313.003.001.00--1.00---1.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CGGGGGTTGTGGTGCCGAATTG..........................................................................................2213.003.001.00-------------------------------------------------------------------------1.00--------------------1.00---
...............................................................................................................................................................................................................................................................................................................................CTTGGTCCCCTGCCCCCACAGT.................................................2213.003.00----------------1.00------------------------1.00-------------------------------1.00-------------------------
.........................................................................................................................................................................GAGTCTGTTCCAGAAGAGAT.........................................................................................................................................................................................................2013.003.00-----------2.00--------1.00------------------------------------------------------------------------------
...........................CGTCAAGAAGATCAGAGTGTCTGT...................................................................................................................................................................................................................................................................................................................................................242.000.00---------2.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTGTT........................................................................................2512.0054.002.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAAGA...........................................................................................2212.004.00-----------------------------------2.00---------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................CACTTGGTCCCCTGCCCCCACAG..................................................2312.002.001.00--1.00-----------------------------------------------------------------------------------------------
................................................................................................TAGAAAGGCTGCTGCTTGGT..................................................................................................................................................................................................................................................................................202.000.00-----2.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................TGTGGTCGGGGGTTGTGTAG..................................................................................................202.000.00-----2.00---------------------------------------------------------------------------------------------
................................................................................................TAGAAAGGCTGCTGCTTGG...................................................................................................................................................................................................................................................................................192.000.00-----2.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAAAA...........................................................................................2212.004.00---------------------------1.00---------------------------------1.00-------------------------------------
....................................................................................................................................................................................................................................................................................................................................................TGAGACAGTACGCCGACA................................1812.002.00-------------------------------------------------------------------1.00--------------1.00----------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATAGA.........................................................................................2412.0027.00----2.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTGTTT.......................................................................................2612.0054.00----2.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................GTCGGGGGTTGTGGTGCCGAATA...........................................................................................231.000.00-------------------------------------------------------------------------------------------1.00-------
...................................................................................................................................................................................................................AGTAGGTCTGTTGGCCAGGGGTGGAAGGTGGAGGT................................................................................................................................................3511.001.00-------------------------------------------------------------------------------1.00-------------------
.....................................................GGAGGTGGGGGTGGGCAT...............................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................................................AATTGAGTCTGTTCCAGAAGAGA..........................................................................................................................................................................................................2311.001.00---1.00-----------------------------------------------------------------------------------------------
..................TGCCAAGACCGTCAAGAA..................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------1.00-------------------------------------------------------------------
...............TTCTGCCAAGACCGTCAAGAAGA................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATAT..........................................................................................2311.0027.00-------------------------------------------1.00-------------------------------------------------------
...............TTCTGCCAAGACCGTCAAGAACACC..............................................................................................................................................................................................................................................................................................................................................................251.000.00---------------------------------------------------------------------------1.00-----------------------
..............................................................................GGGAAGGAAGTCCCTCTG......................................................................................................................................................................................................................................................................................................181.000.00---------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTT..........................................................................................2311.0010.001.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TAGTAGGTCTGTTGGCCAGGGGTGG...........................................................................................................................................................2511.001.00-------------------------------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TTGGTCCCCTGCCCCCACAGAGT...............................................231.000.00-------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GGTCGGGGGTTGTGGTGCCGAATTG..........................................................................................2511.001.001.00--------------------------------------------------------------------------------------------------
...................GCCAAGACCGTCAAGAAGATCAGAG..........................................................................................................................................................................................................................................................................................................................................................2511.001.00-----------------------------------------------------1.00---------------------------------------------
...............TTCTGCCAAGACCGTCAAGAAGATCA.............................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................GTGAGACAGTACGCCGACATTTGCCT.........................2611.001.00----------1.00----------------------------------------------------------------------------------------
...............TTCTGCCAAGACCGTCAAGAAGATCAGAGT.........................................................................................................................................................................................................................................................................................................................................................3011.001.00--------------------------------1.00------------------------------------------------------------------
............................................................................................................................................................................TCTGTTCCAGAAGAGGC.........................................................................................................................................................................................................171.000.00-----------------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................TGAGACAGTACGCCGACATTTGCCTCTTC.....................2911.001.00------1.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................TGGAAGGTGGAGGTGTGCGGT.........................................................................................................................................211.000.00---------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGTGAGACAGTACGCCGAC.................................1911.001.00-------------------------------------------------------1.00-------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTATT........................................................................................2511.0010.00--------1.00------------------------------------------------------------------------------------------
.....................................................GGAGGTGGGGGTGGGCAACT.............................................................................................................................................................................................................................................................................................................................201.000.00-------------------------1.00-------------------------------------------------------------------------
...................GCCAAGACCGTCAAGAAGA................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------1.00------------------------------------------
..................TGCCAAGACCGTCAAGAAGATCAGAGT.........................................................................................................................................................................................................................................................................................................................................................2711.001.00-----------------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................ACCGGGCCATAAAGAATTGAGT.........................................................................................................................................................................................................................2211.001.00--------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................CACTTGGTCCCCTGCCCCCACAGT.................................................2411.001.001.00--------------------------------------------------------------------------------------------------
.......................AGACCGTCAAGAAGATCAGAGTGTCT.....................................................................................................................................................................................................................................................................................................................................................2611.001.00----------1.00----------------------------------------------------------------------------------------
......................................................................................................................................................................ATTGAGTCTGTTCCAGAAGAG...........................................................................................................................................................................................................2111.001.00-----------------------------------------1.00---------------------------------------------------------
..............................................TCTGGTAGGAGGTGGCATA.....................................................................................................................................................................................................................................................................................................................................191.000.00-------------1.00-------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................ACCATGTGGTCGGGGGTTGTGG....................................................................................................2211.001.00------------------------------------------1.00--------------------------------------------------------
.............................................................................................................................................................CCATAAAGAATTGAGTCTGTTCCAGAAGAGATACATGGCCCTAGTGTTTACTATAGTAGGTC...........................................................................................................................................................................6211.001.00--------------------------------------------------1.00------------------------------------------------
.............................TCAAGAAGATCAGAGTGTC......................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------1.00----------------------------------------------------------------------
..............................................TCTGGTAGGAGGTGGTAT......................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------1.00------------------------------------
................................................................................................................................................................................................................................................................................................................................................................CCGACATTTGCCTCTTCAGCACCG..............2411.001.00--------------------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGACTTG..........................................................................................231.000.00---------------------------------------------------------------------1.00-----------------------------
...................................................................................................................................................................................................................................................................................................................................................GTGAGACAGTACGCCGACATTTGCC..........................2511.001.00----------1.00----------------------------------------------------------------------------------------
................................................................................................................................CCGTGTCGCAGTGTGGGAAACCTACCGGGCCATAAAGAATTGAGTCTGTTCCAGAAGAGAT.........................................................................................................................................................................................................6111.001.00--------------------------------------------------1.00------------------------------------------------
...................................................TAGGAGGTGGGGGTGGACG................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------1.00-----------------
............................GTCAAGAAGATCAGAGTGTCTGGGGGA...............................................................................................................................................................................................................................................................................................................................................271.000.00------------------------------------------1.00--------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGATT............................................................................................211.000.00-1.00-------------------------------------------------------------------------------------------------
.....................CAAGACCGTCAAGAAGATCAGAG..........................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................AGTACGCCGACATTTGCCTCT.......................2111.001.00----------1.00----------------------------------------------------------------------------------------
.............................TCAAGAAGATCAGAGTGTCTG....................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------1.00-----------------------------------------------------
..............ATTCTGCCAAGACCGTCAAGAAGATC..............................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------------------------------------------1.00---------------------------------------------------
.....................................................GGAGGTGGGGGTGGGCATCTA............................................................................................................................................................................................................................................................................................................................2111.001.00-------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................TGTGGTCGGGGGTTGTGAAGG.................................................................................................211.000.00-------------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................ACTTGGTCCCCTGCCCCCAAA...................................................211.000.00------------------------------------------------------------------------------------1.00--------------
................................................................................................................................................................................................................................................................................TGTGGTCGGGGGTTGTGT....................................................................................................181.000.00--------------------------1.00------------------------------------------------------------------------
.CATGTCACCAACAATTCTGCCAAGT............................................................................................................................................................................................................................................................................................................................................................................251.000.00----------------1.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................TGTGGTCGGGGGTTGTTTG...................................................................................................191.000.00---------------------------------1.00-----------------------------------------------------------------
................................................................................................................................................................................................................................................................................TGTGGTCGGGGGTTGTGTAGT.................................................................................................211.000.00-------------1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CGGGGGTTGTGGTGCCGAATTTT.........................................................................................2311.001.00----------------------------------------------------1.00----------------------------------------------
...................................AGATCAGAGTGTCTGGTAGG...............................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................................................................................................ATAGTAGGTCTGTTGGCCAGGGG..............................................................................................................................................................2311.001.00---1.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................GGGGGTTGTGGTGCCGAATTT..........................................................................................211.000.00----------------------------------------------------------1.00----------------------------------------
..................................................GTAGGAGGTGGGGGTGGGGTTT..............................................................................................................................................................................................................................................................................................................................221.000.00---------1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................................................TTGAGTCTGTTCCAGAAGAGATACATG....................................................................................................................................................................................................2711.001.00---1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGT.................................................................................................161.000.00-----1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CTTGGTCCCCTGCCCCCACAGTAG...............................................2411.003.00-------1.00-------------------------------------------------------------------------------------------
...TGTCACCAACAATTCTGCCAAGACCGTC.......................................................................................................................................................................................................................................................................................................................................................................2811.001.00----------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................TAAAGAATTGAGTCTGTTCCAGAAGA............................................................................................................................................................................................................2611.001.00----------------------------------------------------------------------------1.00----------------------
..................................................................GGCATGGGGATAGGGC....................................................................................................................................................................................................................................................................................................................161.000.00-----1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAT.............................................................................................201.000.001.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................................TGAGTCTGTTCCAGAAGGCC..........................................................................................................................................................................................................201.000.00----------------------------1.00----------------------------------------------------------------------
...................GCCAAGACCGTCAAGAAGATC..............................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------1.00----------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTGTAA.......................................................................................2611.0054.001.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................ATGTGGTCGGGGGTTGTGGTGCCGAATTGTCTGTG....................................................................................3511.001.00---1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTGTGT.......................................................................................2611.0054.00------1.00--------------------------------------------------------------------------------------------
..................................................GTAGGAGGTGGGGGTGGGTTTG..............................................................................................................................................................................................................................................................................................................................221.000.00---------1.00-----------------------------------------------------------------------------------------
................TCTGCCAAGACCGTCAAGAAGATCAGAGT.........................................................................................................................................................................................................................................................................................................................................................2911.001.00-----------------------------------------------1.00---------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................TGAGACAGTACGCCGAAC................................181.000.00-------------------------------------------------------------------------------------------------1.00-
.........................ACCGTCAAGAAGATCAGAGTGTCTGGGAGA...............................................................................................................................................................................................................................................................................................................................................301.000.00---1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAAA............................................................................................2111.004.00----------------------1.00----------------------------------------------------------------------------
...................................................TAGGAGGTGGGGGTGGCTA................................................................................................................................................................................................................................................................................................................................191.000.00-------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATAGC.........................................................................................2411.0027.00----1.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CGGGGGTTGTGGTGCCGAATT...........................................................................................2111.001.001.00--------------------------------------------------------------------------------------------------
............................................................................................................................................................................TCTGTTCCAGAAGAGATACATGG...................................................................................................................................................................................................2311.001.00------------------------------------------------1.00--------------------------------------------------
.................................................................................................................................................................AAAGAATTGAGTCTGTTCCAGAAGAGATAC.......................................................................................................................................................................................................3011.001.00---1.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................................ATAAAGAATTGAGTCTGTTCCAGAAGAGATAC.......................................................................................................................................................................................................3211.001.00---1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TCGGGGGTTGTGGTGCCGAATTGG.........................................................................................2411.0016.001.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................CACTTGGTCCCCTGCCCCCACA...................................................2211.001.00---------------------------------------1.00-----------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................ACTTGGTCCCCTGCCCCCACAGA.................................................2311.006.00--1.00------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CGGGGGTTGTGGTGCCGAATTGTCT.......................................................................................2511.001.001.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................GCCGACATTTGCC..........................1380.120.12--------------------------0.12------------------------------------------------------------------------

Antisense strand
CCATGTCACCAACAATTCTGCCAAGACCGTCAAGAAGATCAGAGTGTCTGGTAGGAGGTGGGGGTGGGCATGGGGATAGGGAAGGAAGTCCCTACTTAGAAAGGCTGCTGCTGCCATGTCAGCCCAGGCCGTGTCGCAGTGTGGGAAACCTACCGGGCCATAAAGAATTGAGTCTGTTCCAGAAGAGATACATGGCCCTAGTGTTTACTATAGTAGGTCTGTTGGCCAGGGGTGGAAGGTGGAGGTGTGCTGCCCCCATGGGGTTTCCACCATGTGGTCGGGGGTTGTGGTGCCGAATTGTCTGTGTCACCCAAAGCCACTTGGTCCCCTGCCCCCACAGTGAGACAGTACGCCGACATTTGCCTCTTCAGCACCGCGCAGTACAAGTGT
...................................................................................................................................................................(((.....((((.((....)).)))).((..(((((....(((((....)))))......(((((..((((((((((((.(((.....))).))))....))))))))...))))).)))))..))...........))).......................................................................................
..............................................................................................................................................................159...............................................................................................................................................305...................................................................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		mjLiverWT1()
Liver Data. (liver)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR073954(GSM629280)
total RNA. (blood)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR553586(SRX182792)
source: Testis. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR206940(GSM723281)
other. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		GSM475281(GSM475281)
total RNA. (testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
..............ATTCTGCCAAGACCGC........................................................................................................................................................................................................................................................................................................................................................................ 164.000.00-------------2.00-----2.00-------------------------------------------------------------------------------
........................................................................................................................................................................TGAGTCTGTTCCAGACGGC........................................................................................................................................................................................................... 194.000.00------------4.00--------------------------------------------------------------------------------------
..............ATTCTGCCAAGACCGCA....................................................................................................................................................................................................................................................................................................................................................................... 174.000.00--------------4.00------------------------------------------------------------------------------------
..............ATTCTGCCAAGACCGCAGC..................................................................................................................................................................................................................................................................................................................................................................... 192.000.00----------------------------------------2.00----------------------------------------------------------
..............ATTCTGCCAAGACCG......................................................................................................................................................................................................................................................................................................................................................................... 1512.002.00-------------------------------------1.00--------------------------1.00----------------------------------
................................................................................................................................................................................................................................................................................................................................TTGGTCCCCTGCCCCCA..................................................... 172.000.00-----------------2.00---------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CGGGGGTTGTGGTGCCGAATTGT......................................................................................... 2311.001.00------------------------------------------------------------------------------------------------1.00--
..............ATTCTGCCAAGACCGT........................................................................................................................................................................................................................................................................................................................................................................ 1611.001.00-------------------------1.00-------------------------------------------------------------------------
..........................CCGTCAAGAAGATCAGCTA......................................................................................................................................................................................................................................................................................................................................................... 191.000.00------------------------------------------------------------------1.00--------------------------------
................................................................................................................................................................................................................TATAGTAGGTCTGTTACTG................................................................................................................................................................... 191.000.00-----1.00---------------------------------------------------------------------------------------------
..................TGCCAAGACCGTCAAGAAGATC.............................................................................................................................................................................................................................................................................................................................................................. 2211.001.00---------------------------------------------1.00-----------------------------------------------------
...............................................................................................................................................................................................ATGGCCCTAGTGTTTACT..................................................................................................................................................................................... 181.000.00----------------------------------------------------------------------1.00----------------------------
...........................................................................................CTACTTAGAAAGGCTGA.......................................................................................................................................................................................................................................................................................... 171.000.00------------------------------1.00--------------------------------------------------------------------
..............ATTCTGCCAAGACCGTCA...................................................................................................................................................................................................................................................................................................................................................................... 181.000.00------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................CACCGCGCAGTACAATGC. 181.000.00--------------------------1.00------------------------------------------------------------------------
..............ATTCTGCCAAGACCGTCAG..................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................CCAGGCCGTGTCGCACAT......................................................................................................................................................................................................................................................... 181.000.00-----------------1.00---------------------------------------------------------------------------------
................TCTGCCAAGACCGT........................................................................................................................................................................................................................................................................................................................................................................ 1431.001.00------------1.00--------------------------------------------------------------------------------------
.................................................................................................................CCATGTCAGCCCAGGGGA................................................................................................................................................................................................................................................................... 181.000.00---------------------------------1.00-----------------------------------------------------------------
...............TTCTGCCAAGACCGT........................................................................................................................................................................................................................................................................................................................................................................ 1520.500.50------------------------------------------------------0.50--------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................CACCGCGCAGTA....... 1290.110.11--------------------------0.11------------------------------------------------------------------------
...........................................................................................CTACTTAGAAAGGCT............................................................................................................................................................................................................................................................................................ 1590.110.11--------------------------------------------------------------------------------------------------0.11