ID: mmu-mir-7086
GENE: Il10ra(4)
chr9:45074676-45074925-


(1)
AGO.mut 		(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
AGO3.ip 		(14)
B-CELL 		(7)
BRAIN 		(2)
CELL-LINE 		(1)
DCR.mut 		(3)
EMBRYO 		(1)
KIDNEY 		(3)
LIVER 		(1)
LUNG 		(4)
LYMPH 		(13)
OTHER 		(2)
OTHER.mut 		(4)
PIWI.ip 		(2)
PIWI.mut 		(1)
SKIN 		(11)
SPLEEN 		(14)
TESTES 		(2)
THYMUS 		(1)
UTERUS

Sense strand
TTAGGGGGGAATGAGCTACTTAAATTCCCACCCAGGGGCTTTCTAGAACATGGATGTCAACAGAGACCTTGGCCAAGGGCCTGAGGACTGTTCCCTTTGTCATTAAGGAAACGTTCTGCCTGGCCTTTCCCTCCCCTCTTAAGAGGAGAAAGGTTTGGGCACAAGCTGTTCCCTCAGTGTCCGTTCTGATATCTCCTCAGGTACGGAAACTCAACCTGGAATGACATCCATATCTGTAGAAAGGCTCAGG
..............................................................................................................................................(((((((..((..(((((((..............)))))))..))....)))))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037937(GSM510475)
293cand2. (cell line)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT3()
Testes Data. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		GSM475281(GSM475281)
total RNA. (testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCA.........................................................................................21189.0089.004.005.003.007.009.006.001.006.005.005.003.003.003.002.001.004.00-3.001.001.001.002.002.001.001.003.002.00---1.00-------1.00-------1.001.00---------1.00-------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCA.........................................................................................22147.0047.009.005.001.002.001.001.001.002.002.005.00-4.002.002.004.001.00-1.00-1.00-------------1.00---------------1.00------1.00--------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCAT........................................................................................23142.0047.0029.003.002.00-3.00---1.00---------2.00----1.001.00----------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCAC........................................................................................21127.0027.0010.003.001.00-1.001.003.00--1.00----1.00--1.00---1.00----1.00------1.00----------1.00---------------------------1.00----
...........................................................................................................................................TAAGAGGAGAAAGGTTTG.............................................................................................18120.0020.0011.00-------1.00-3.00-1.00--1.00----2.00---1.00----------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAT........................................................................................22120.0089.0012.003.00------1.00-1.00--1.00--------1.00-------1.00----------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCAA........................................................................................23116.0047.0012.00----1.00----1.00-1.00------1.00---------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCATT.......................................................................................24115.0047.0014.00-----1.00----------------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACT.......................................................................................22112.0027.002.001.00---1.001.001.001.00--1.001.00-------1.00----1.001.00--------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCAT........................................................................................21112.009.002.001.001.00--1.002.00-1.00-1.00-------1.001.00------------1.00--------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAA........................................................................................22111.0089.006.00-1.001.00--------2.00-----------------1.00----------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCA.........................................................................................2019.009.001.001.00---1.00-1.00-1.00---1.001.00---------------------1.001.00---------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCAC........................................................................................2319.009.008.00--------1.00-------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAC........................................................................................2218.008.004.001.00-1.00--------------1.00-----------------------------------1.00----------------------
...................................................................................................................................................................................TCCGTTCTGATATCTCCTCAGT.................................................228.000.00-------------------------------3.00--------1.00-----------1.00--1.00----1.00----1.00-----------
.............................................................................................................................................................................................................................TGACATCCATATCTGTAGAAAGGCTC...2617.007.00---------------------------3.002.00----------------------1.00------1.00------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCACT.......................................................................................2416.009.002.001.00-1.00---------1.00----------------------------------1.00----------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCATT.......................................................................................2316.0089.001.001.003.00--------------------1.00-----------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACA.......................................................................................2216.006.00---2.00---1.00--------------1.001.00-------------------------------------1.00---------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCAAT.......................................................................................2415.0047.003.001.00-----------------------1.00---------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACT.......................................................................................2315.008.001.00-1.00---1.00---1.00--------1.00---------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGG............................................................................................1915.005.004.00-----------1.00----------------------------------------------------------------
..............................................................................................................................................GAGGAGAAAGGTTTGGGCA.........................................................................................1914.004.00-----2.00--------2.00--------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACTT......................................................................................2414.008.003.00------1.00---------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGG...........................................................................................1914.004.00---------------1.00---1.00--1.00---1.00--------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCATTT......................................................................................2413.0089.001.00----------------------1.00--------------1.00--------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACTAT.....................................................................................2413.0027.001.00------1.00---------1.00-----------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCAAA.......................................................................................2413.0047.001.001.00----1.00----------------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACTT......................................................................................2313.0027.001.00-----2.00----------------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGC..........................................................................................2113.003.002.00-----------------1.00----------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAAA.......................................................................................2312.0089.002.00----------------------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCATT.......................................................................................2212.009.00------------------------2.00----------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAAAT......................................................................................2412.0089.002.00----------------------------------------------------------------------------
............................................................................................................................................................................................................................ATGACATCCATATCTGTAGAAAGGCTC...2712.002.00----------------------------1.00-----------------------------------------1.00------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCAGA.......................................................................................2412.0047.001.00-----------------------------------------1.00----------------------------------
..........................................................................................................................................TTAAGAGGAGAAAGGTTTGGGCA.........................................................................................2312.002.00---1.00-------1.00-----------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAATT......................................................................................2412.0089.002.00----------------------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCAA........................................................................................2112.009.00-------------1.00----------------------------------------------------1.00----------
.................................................................................................................................................................CAAGCTGTTCCCTCAGTG.......................................................................1812.002.00----------1.00-------1.00----------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACA.......................................................................................2312.002.001.00-------------------1.00--------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGG............................................................................................1821.501.50------0.50-----------------------------------0.50--------------------------------0.50-
...................................................................................................................................................................................TCCGTTCTGATATCTCCTAAGT.................................................221.000.00----------------------------------------1.00------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACTTTT....................................................................................2511.0027.001.00----------------------------------------------------------------------------
..............................................AACATGGATGTCAACAGAGA........................................................................................................................................................................................2011.001.00------------------------------------1.00----------------------------------------
.................................................................................................................................................................................TGTCCGTTCTGATATCTCCTCAG..................................................2311.001.00-----------------------------------------------------------------------1.00-----
............................................................................................................................................AAGAGGAGAAAGGTTTGGGGACT.......................................................................................2311.004.00-----1.00-----------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACTAA.....................................................................................2511.008.00------------1.00----------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCATAA......................................................................................2311.009.001.00----------------------------------------------------------------------------
............................................................................................................AAACGTTCTGCCTGGCCTTACC........................................................................................................................221.000.00-----------------1.00-----------------------------------------------------------
.........................TCCCACCCAGGGGCTCCA...............................................................................................................................................................................................................181.000.00-----------------------------------1.00-----------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCAAAAA.....................................................................................2411.009.00-----------1.00-----------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCATTTT.....................................................................................2511.0089.00--1.00--------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGC..........................................................................................2011.001.00---------------------------------------------------------------------1.00-------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCATTT......................................................................................2511.0047.001.00----------------------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGTCAC........................................................................................2311.005.00---1.00-------------------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGG...........................................................................................2011.001.001.00----------------------------------------------------------------------------
................................................................................................................................CCCTCCCCTCTTAAGAGGAGAAAGGTTTGGGCACAAGCTGTTCCCTCAGTGTCCGTTCTGATATCTCCTCAG..................................................7211.001.00---------------------------------------1.00-------------------------------------
..............................................................................................................................................GAGGAGAAAGGTTTGGGCAC........................................................................................2011.001.00-------------------------------------1.00---------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACTATT....................................................................................2511.0027.00--------------1.00--------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACTAG.....................................................................................2411.0027.00-------------1.00---------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAAAA......................................................................................2411.0089.00--1.00--------------------------------------------------------------------------
...................................................................................................................................................................................TCCGTTCTGATATCTCCTCAGTTT...............................................241.000.00--------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................GTACGGAAACTCAACCTGGAATGACATCC.....................2911.001.00-----------------------------------------1.00-----------------------------------
....................................................................................................................................................AAAGGTTTGGGCACAGCA....................................................................................181.000.00-----------------------------------------------------------1.00-----------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGTCAT........................................................................................2311.005.001.00----------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACTTAT....................................................................................2611.008.00--1.00--------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAAAGA.....................................................................................2511.0089.00-1.00---------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGCGCA.........................................................................................211.000.00----1.00------------------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACTA......................................................................................2311.0027.00--------------------------------1.00--------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACAT......................................................................................2311.006.00---------------------1.00-------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCATTAA.....................................................................................2611.0047.001.00----------------------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCACA.......................................................................................2411.001.001.00----------------------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCATTAT.....................................................................................2611.0047.001.00----------------------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGTTCA.........................................................................................2211.0020.00----------1.00------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAATTT.....................................................................................2511.0089.001.00----------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGTCA.........................................................................................2121.001.50-1.00---------------------------------------------------------------------------
...............................................................................................................................................AGGAGAAAGGTTTGGGCACAATT....................................................................................231.000.00------1.00----------------------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACATAT....................................................................................2511.006.00---------------------------------------------1.00-------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCTTT.......................................................................................2411.003.001.00----------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCAAGA......................................................................................2411.0089.00-----------1.00-----------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCAAAA......................................................................................2511.0047.001.00----------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACTA......................................................................................2411.008.00--1.00--------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGACAT........................................................................................2221.001.501.00----------------------------------------------------------------------------
.............................................................................................................................................................................................................................TGACATCCATATCTGTAGAAAGGCTCA..2711.001.00--------------------------------------------------------------------------1.00--
............................................................................................................................................................................CTCAGTGTCCGTTCTGATATCTCCTCAGGTACGGAAACTCAACCTGGAATGACATCCATATCTGTAGAAAGGC.....7311.001.00---------------------------------------1.00-------------------------------------
............................................................................................................AAACGTTCTGCCTGGCCTTTAA........................................................................................................................221.000.00-------------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................................TGACATCCATATCTGTAGAAAGGCTCAGG2911.001.00---------------------------------------------------------------1.00-------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCAAT.......................................................................................2211.009.00---------------1.00-------------------------------------------------------------
...................................................................................................................................................................................................................................CCATATCTGTAGAAAGGCTCAGG2311.001.00---------------------1.00-------------------------------------------------------
..............................................................................................................................................................................................................................GACATCCATATCTGTAGAAAGGCTCA..2611.001.00-----------------------------------------------------1.00-----------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGC..........................................................................................1911.001.00---------------1.00-------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCATAAT.....................................................................................2511.0089.00-1.00---------------------------------------------------------------------------
...................................................................................................................................................................................TCCGTTCTGATATCTCCTCAGTT................................................231.000.00-----------1.00-----------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACTAAT....................................................................................2611.008.001.00----------------------------------------------------------------------------
........................................................................................................................................................................................................................TGGAATGACATCCATATCTGTAGAAAGGCT....3011.001.00---------------------------1.00-------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCATA.......................................................................................2411.0047.001.00----------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACTAAA....................................................................................2611.008.00-------------------------------------------------------------------------1.00---
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCACAT......................................................................................2411.002.00-------1.00---------------------------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCATG.......................................................................................2411.0047.001.00----------------------------------------------------------------------------
............................................................................................................................................AAGAGGAGAAAGGTTTGGGCATTA......................................................................................2411.0089.001.00----------------------------------------------------------------------------
..........................................................................AAGGGCCTGAGGACTGTTCCC...........................................................................................................................................................2111.001.00--------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................CGTTCTGATATCTCCTCAG..................................................1911.001.00----------------------------------------------------------------1.00------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGGCACTTA.....................................................................................2411.0027.00---------------------1.00-------------------------------------------------------
........................................................................................................................................................................................................................TGGAATGACATCCATATCTGTAGAAAGGCTC...3111.001.00----------------------------1.00------------------------------------------------
...........................................................................................................................................TAAGAGGAGAAAGGTTTGGGCACTTTT....................................................................................2711.009.001.00----------------------------------------------------------------------------
........................................................................CCAAGGGCCTGAGGACTG................................................................................................................................................................1820.500.50----------------------0.50------------------------------------------------------
.............................................................................................................................................AGAGGAGAAAGGTTTGGG...........................................................................................1820.500.50--------------------------------0.50--------------------------------------------
.............................................................................GGCCTGAGGACTGTTCC............................................................................................................................................................1720.500.50-----------------------------------------0.50-----------------------------------

Antisense strand
TTAGGGGGGAATGAGCTACTTAAATTCCCACCCAGGGGCTTTCTAGAACATGGATGTCAACAGAGACCTTGGCCAAGGGCCTGAGGACTGTTCCCTTTGTCATTAAGGAAACGTTCTGCCTGGCCTTTCCCTCCCCTCTTAAGAGGAGAAAGGTTTGGGCACAAGCTGTTCCCTCAGTGTCCGTTCTGATATCTCCTCAGGTACGGAAACTCAACCTGGAATGACATCCATATCTGTAGAAAGGCTCAGG
..............................................................................................................................................(((((((..((..(((((((..............)))))))..))....)))))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037937(GSM510475)
293cand2. (cell line)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT3()
Testes Data. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		GSM475281(GSM475281)
total RNA. (testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)
................................................................................................................................................................ACAAGCTGTTCCCTCAAT........................................................................ 183.000.00----------------1.00--------------------------1.00------------------------1.00--------
..............................................................................................................................................................GCACAAGCTGTTCCCTCATGT....................................................................... 212.000.00-----------------------------2.00-----------------------------------------------
....................................................................................................................TGCCTGGCCTTTCCCTCCT................................................................................................................... 191.000.00----------------------------------1.00------------------------------------------
................................................................................................................................................................ACAAGCTGTTCCCTCAACAG...................................................................... 201.000.00----------------1.00------------------------------------------------------------
...............................................................................................TTTGTCATTAAGGAAAAA......................................................................................................................................... 181.000.00-----------------------------------1.00-----------------------------------------
......................................................................................................................................................................................GTTCTGATATCTCCTTCC.................................................. 181.000.00----------------1.00------------------------------------------------------------
................................................................................................................................................................ACAAGCTGTTCCCTCAATAG...................................................................... 201.000.00----------------1.00------------------------------------------------------------
..............................................................................................................................................................GCACAAGCTGTTCCCTCATTTT...................................................................... 221.000.00-----------------------------1.00-----------------------------------------------
..............................................................................................................................................................GCACAAGCTGTTCCCTCATGTT...................................................................... 221.000.00-------------------------------------------------------------------1.00---------
....................................................................................................................TGCCTGGCCTTTCCCTCCCCTT................................................................................................................ 221.000.00----------------------------------1.00------------------------------------------
................................................................................................................................................................ACAAGCTGTTCCCTCAAG........................................................................ 181.000.00----------------1.00------------------------------------------------------------
..............................................................................................................................................................GCACAAGCTGTTCCCTCAA......................................................................... 191.000.00----------------1.00------------------------------------------------------------
..............................................................................................................................................................GCACAAGCTGTTCCCTCATGCT...................................................................... 221.000.00-----------------------------1.00-----------------------------------------------
................................................................................................................GTTCTGCCTGGCCTTAAG........................................................................................................................ 181.000.00--------------------------------------------------1.00--------------------------
..............................................................................................................................................................GCACAAGCTGTTCCCTCAT......................................................................... 191.000.00----------------1.00------------------------------------------------------------
...............................................................................................................................................................CACAAGCTGTTCCCTCAT......................................................................... 181.000.00----------------1.00------------------------------------------------------------
..............................................................................................................................................................................................................AAACTCAACCTGGAATGTT......................... 191.000.00--------------------------------------------------------------1.00--------------
...............................................................................................................................................................................AGTGTCCGTTCTGAT............................................................ 1520.500.50-------------------------------------------0.50---------------------------------
.........................................................................................................................................................................TCCCTCAGTGTCCGT.................................................................. 1560.170.17----------------------------------------------------------------------------0.17