ID: mmu-mir-7074
GENE: Slc12a4(7)
chr8:108475487-108475729-


(1)
AGO.mut
(1)
AGO1.ip
(4)
AGO2.ip
(1)
AGO3.ip
(3)
B-CELL
(8)
BRAIN
(2)
CELL-LINE
(1)
DGCR8.mut
(6)
EMBRYO
(9)
ESC
(6)
FIBROBLAST
(2)
HEART
(1)
KIDNEY
(5)
LIVER
(1)
LYMPH
(11)
OTHER
(2)
OTHER.mut
(1)
PIWI.mut
(3)
SKIN
(1)
SPLEEN
(7)
TESTES
(1)
THYMUS
(8)
TOTAL-RNA

Sense strand
TCCATTTACGCGGGAGGCATCAAGTCCATTTTTGACCCTCCCGTGTTTCCGTGAGTAACTAGGGCATTTGTTCCAGCCATTGCCCTGGCATCCTTTCTAAGCCTTTGGTGTTCTGTGTCCCTCTGATTGCTTGGGTGGGAAGAGGCTAGGGCTCCAGTCCAGCAGGTAACTAGGCCTTCTCCTCTCCCTGCAGGGTGTGTATGCTGGGCAATAGGACCCTGTCTCGGGACCAGTTTGACATCT
......................................................................................................................................(((((.(((((..((((((..(((((....))..))).))))))..))))).)))))....................................................
..................................................................................................................................131...........................................................193................................................
SizePerfect hitTotal NormPerfect NormmjTestesWT1()
Testes Data. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
mjTestesWT3()
Testes Data. (testes)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR073954(GSM629280)
total RNA. (blood)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
GSM475281(GSM475281)
total RNA. (testes)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR073955(GSM629281)
total RNA. (blood)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
mjTestesWT2()
Testes Data. (testes)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAG..................................................23151.0051.0010.002.003.001.004.00-2.002.001.00---2.00-1.003.001.002.00-2.001.00--2.00-----1.002.00--2.00-----------1.001.00-1.00--1.00----1.00-1.00-------------1.00-
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGT.................................................24131.0051.00-6.004.002.003.00--1.00--3.00---2.00-----------1.00-------2.00-1.00------1.00---1.00--1.00---1.00--1.00-1.00--------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGA.................................................2418.0051.00-----5.00-----2.00-----------------------------------------1.00--------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCA...................................................2216.006.00------1.00-1.00----------------2.001.00---------------------------------------1.00-------
.......................................................................................................................................TGGGAAGAGGCTAGGGCTCCAGT.....................................................................................2315.005.00-------------1.00--1.00-----------2.00------------------------------------1.00--------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAA..................................................2314.006.00---1.00----1.00--1.00-------------------------------------1.00------------------------
....................................................................................................................................................................................................................AGGACCCTGTCTCGGGACCAGT.........2213.003.00------1.00--------------1.00----------1.00-----------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAT..................................................2313.006.00----------------------1.00-----------------------------1.00--1.00------------------
.......................................................................................................................................................................................................TATGCTGGGCAATAGGACCC........................2013.003.00---------3.00----------------------------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGTA................................................2512.0051.00-------1.00--------------1.00---------------------------------------------------
............................................................................................................................................................................GGCCTTCTCCTCTCCCTGCAGA.................................................222.000.00-2.00------------------------------------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGTAG...............................................2612.0051.00---1.00-----------------------1.00----------------------------------------------
.....................................................................................................................................GGTGGGAAGAGGCTAGGGCTCCAGT.....................................................................................2512.002.00----------------1.00---1.00-----------------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGAAA...............................................2612.0051.00------------------------2.00-------------------------------------------------
...........................................................................................................................................................................AGGCCTTCTCCTCTCCCTGCA...................................................2111.001.00---------------------------------------1.00----------------------------------
....................................................................................................................................................................................................................AGGACCCTGTCTCGGGACCAGTT........2311.001.00---------------------1.00----------------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTTCAT..................................................231.000.00-------------------------------1.00------------------------------------------
............................................................................................................................................AGAGGCTAGGGCTCCGGT.....................................................................................181.000.00-----------------------------------1.00--------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGTTT...............................................2611.0051.00---------------------------1.00----------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGCTT...............................................2611.0051.00------------1.00-------------------------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGG....................................................2111.001.00-------------------------------------------------------------1.00------------
...................................................................................................................................TGGGTGGGAAGAGGCTAGGGCTAA........................................................................................241.000.00--------------------------------------1.00-----------------------------------
.....................................................................................................................................GGTGGGAAGAGGCTAGGGCTCCAGTA....................................................................................2611.002.00----------------------------------------------------------------------1.00---
............................................................................................................................................................GTCCAGCAGGTAACTGAGA....................................................................191.000.00--------------------------------------------------------------1.00-----------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTTTT...................................................221.000.00---1.00----------------------------------------------------------------------
...............................................................................................................................................................................CTTCTCCTCTCCCTGCAG..................................................1811.001.00--------------------------------1.00-----------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGTTTT..............................................2711.0051.00------------------------------------------------------------1.00-------------
..................................................................................................................................TTGGGTGGGAAGAGGCTAGGGCA..........................................................................................231.000.00-----------------------------1.00--------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTG.....................................................2011.001.00--------------------------------------------1.00-----------------------------
...............................................................................................................................TGCTTGGGTGGGAAGAGGCTAGT.............................................................................................231.000.00--------------------------------------------------------------------1.00-----
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGAC................................................2511.0051.00------1.00-------------------------------------------------------------------
............................................................................................................................................AGAGGCTAGGGCTCCTTGA....................................................................................191.000.00----------------------------------------1.00---------------------------------
.....................................................................................................................................GGTGGGAAGAGGCTAGGGCTCA........................................................................................221.000.00-------------1.00------------------------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCAGAA................................................2511.0051.00------------------------------------------1.00-------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGC....................................................2111.001.00-------------------------------------------------------------------1.00------
................................TGACCCTCCCGTGTTTCC.................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------1.00--
............................................................................................................................................................................................TGCAGGGTGTGTATGGTTT....................................191.000.00---------------------------------------------------------------------1.00----
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCC...................................................2211.001.00------------------1.00-------------------------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGA....................................................2111.001.00---------------------------------------------------------------1.00----------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGCCGT.................................................2411.001.00------------------1.00-------------------------------------------------------
...........................................................................................................................................................................AGGCCTTCTCCTCTCCCTGCACT.................................................2311.001.00-------------------------------1.00------------------------------------------
.......ACGCGGGAGGCATCAAGTCC........................................................................................................................................................................................................................2011.001.00-------------------------------------1.00------------------------------------
..........................................................................................................................................................................TAGGCCTTCTCCTCTCCCTGT....................................................2111.001.00---1.00----------------------------------------------------------------------
..................................................................................................................................TTGGGTGGGAAGAGGCTAGGGCT..........................................................................................2311.001.00-----------------------------------------1.00--------------------------------

Antisense strand
TCCATTTACGCGGGAGGCATCAAGTCCATTTTTGACCCTCCCGTGTTTCCGTGAGTAACTAGGGCATTTGTTCCAGCCATTGCCCTGGCATCCTTTCTAAGCCTTTGGTGTTCTGTGTCCCTCTGATTGCTTGGGTGGGAAGAGGCTAGGGCTCCAGTCCAGCAGGTAACTAGGCCTTCTCCTCTCCCTGCAGGGTGTGTATGCTGGGCAATAGGACCCTGTCTCGGGACCAGTTTGACATCT
......................................................................................................................................(((((.(((((..((((((..(((((....))..))).))))))..))))).)))))....................................................
..................................................................................................................................131...........................................................193................................................
SizePerfect hitTotal NormPerfect NormmjTestesWT1()
Testes Data. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
mjTestesWT3()
Testes Data. (testes)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR073954(GSM629280)
total RNA. (blood)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
GSM475281(GSM475281)
total RNA. (testes)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR073955(GSM629281)
total RNA. (blood)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
mjTestesWT2()
Testes Data. (testes)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
............................................................................................................TGTTCTGTGTCCCTCTGGGCA.................................................................................................................. 211.000.00-------------1.00------------------------------------------------------------
.........................................................................................ATCCTTTCTAAGCCTCAC........................................................................................................................................ 181.000.00----------------------------------------------------------------1.00---------
................GCATCAAGTCCATTTT................................................................................................................................................................................................................... 1630.330.33-------------------------------------------------------------------------0.33